data_7PYM # _model_server_result.job_id tnSoqibwPlNT0c76rNrPLA _model_server_result.datetime_utc '2024-11-24 11:26:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pym # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 7PYM # _exptl.entry_id 7PYM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PYM _cell.length_a 48.86 _cell.length_b 48.86 _cell.length_c 108.96 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PYM _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 41 A CYS 41 1_555 A SG CYS 167 A CYS 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc1 A N HIS 1 A HIS 1 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc2 A ND1 HIS 1 A HIS 1 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc3 A NE2 HIS 78 A HIS 78 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc4 A OH TYR 164 A TYR 164 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc5 B CU CU . A CU 301 1_555 G O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc6 B CU CU . A CU 301 1_555 G O HOH . A HOH 623 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.463 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 7PYM _atom_sites.fract_transf_matrix[1][1] 0.020467 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020467 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 301 301 CU CU . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 3 SO4 A 1 304 3 SO4 SO4 . F 3 SO4 A 1 305 4 SO4 SO4 . G 4 HOH A 1 401 218 HOH HOH . G 4 HOH A 2 402 224 HOH HOH . G 4 HOH A 3 403 170 HOH HOH . G 4 HOH A 4 404 211 HOH HOH . G 4 HOH A 5 405 150 HOH HOH . G 4 HOH A 6 406 98 HOH HOH . G 4 HOH A 7 407 156 HOH HOH . G 4 HOH A 8 408 242 HOH HOH . G 4 HOH A 9 409 217 HOH HOH . G 4 HOH A 10 410 216 HOH HOH . G 4 HOH A 11 411 93 HOH HOH . G 4 HOH A 12 412 232 HOH HOH . G 4 HOH A 13 413 20 HOH HOH . G 4 HOH A 14 414 201 HOH HOH . G 4 HOH A 15 415 6 HOH HOH . G 4 HOH A 16 416 100 HOH HOH . G 4 HOH A 17 417 65 HOH HOH . G 4 HOH A 18 418 140 HOH HOH . G 4 HOH A 19 419 88 HOH HOH . G 4 HOH A 20 420 243 HOH HOH . G 4 HOH A 21 421 54 HOH HOH . G 4 HOH A 22 422 5 HOH HOH . G 4 HOH A 23 423 222 HOH HOH . G 4 HOH A 24 424 117 HOH HOH . G 4 HOH A 25 425 121 HOH HOH . G 4 HOH A 26 426 254 HOH HOH . G 4 HOH A 27 427 14 HOH HOH . G 4 HOH A 28 428 68 HOH HOH . G 4 HOH A 29 429 124 HOH HOH . G 4 HOH A 30 430 227 HOH HOH . G 4 HOH A 31 431 2 HOH HOH . G 4 HOH A 32 432 27 HOH HOH . G 4 HOH A 33 433 30 HOH HOH . G 4 HOH A 34 434 1 HOH HOH . G 4 HOH A 35 435 123 HOH HOH . G 4 HOH A 36 436 86 HOH HOH . G 4 HOH A 37 437 99 HOH HOH . G 4 HOH A 38 438 58 HOH HOH . G 4 HOH A 39 439 182 HOH HOH . G 4 HOH A 40 440 11 HOH HOH . G 4 HOH A 41 441 164 HOH HOH . G 4 HOH A 42 442 33 HOH HOH . G 4 HOH A 43 443 95 HOH HOH . G 4 HOH A 44 444 23 HOH HOH . G 4 HOH A 45 445 193 HOH HOH . G 4 HOH A 46 446 241 HOH HOH . G 4 HOH A 47 447 41 HOH HOH . G 4 HOH A 48 448 91 HOH HOH . G 4 HOH A 49 449 60 HOH HOH . G 4 HOH A 50 450 47 HOH HOH . G 4 HOH A 51 451 198 HOH HOH . G 4 HOH A 52 452 62 HOH HOH . G 4 HOH A 53 453 138 HOH HOH . G 4 HOH A 54 454 187 HOH HOH . G 4 HOH A 55 455 176 HOH HOH . G 4 HOH A 56 456 207 HOH HOH . G 4 HOH A 57 457 238 HOH HOH . G 4 HOH A 58 458 107 HOH HOH . G 4 HOH A 59 459 173 HOH HOH . G 4 HOH A 60 460 71 HOH HOH . G 4 HOH A 61 461 64 HOH HOH . G 4 HOH A 62 462 97 HOH HOH . G 4 HOH A 63 463 84 HOH HOH . G 4 HOH A 64 464 32 HOH HOH . G 4 HOH A 65 465 158 HOH HOH . G 4 HOH A 66 466 147 HOH HOH . G 4 HOH A 67 467 42 HOH HOH . G 4 HOH A 68 468 72 HOH HOH . G 4 HOH A 69 469 39 HOH HOH . G 4 HOH A 70 470 48 HOH HOH . G 4 HOH A 71 471 153 HOH HOH . G 4 HOH A 72 472 40 HOH HOH . G 4 HOH A 73 473 34 HOH HOH . G 4 HOH A 74 474 79 HOH HOH . G 4 HOH A 75 475 44 HOH HOH . G 4 HOH A 76 476 7 HOH HOH . G 4 HOH A 77 477 10 HOH HOH . G 4 HOH A 78 478 49 HOH HOH . G 4 HOH A 79 479 75 HOH HOH . G 4 HOH A 80 480 136 HOH HOH . G 4 HOH A 81 481 55 HOH HOH . G 4 HOH A 82 482 13 HOH HOH . G 4 HOH A 83 483 66 HOH HOH . G 4 HOH A 84 484 26 HOH HOH . G 4 HOH A 85 485 35 HOH HOH . G 4 HOH A 86 486 8 HOH HOH . G 4 HOH A 87 487 208 HOH HOH . G 4 HOH A 88 488 233 HOH HOH . G 4 HOH A 89 489 171 HOH HOH . G 4 HOH A 90 490 210 HOH HOH . G 4 HOH A 91 491 220 HOH HOH . G 4 HOH A 92 492 174 HOH HOH . G 4 HOH A 93 493 53 HOH HOH . G 4 HOH A 94 494 82 HOH HOH . G 4 HOH A 95 495 70 HOH HOH . G 4 HOH A 96 496 189 HOH HOH . G 4 HOH A 97 497 3 HOH HOH . G 4 HOH A 98 498 12 HOH HOH . G 4 HOH A 99 499 38 HOH HOH . G 4 HOH A 100 500 165 HOH HOH . G 4 HOH A 101 501 28 HOH HOH . G 4 HOH A 102 502 162 HOH HOH . G 4 HOH A 103 503 45 HOH HOH . G 4 HOH A 104 504 4 HOH HOH . G 4 HOH A 105 505 29 HOH HOH . G 4 HOH A 106 506 251 HOH HOH . G 4 HOH A 107 507 114 HOH HOH . G 4 HOH A 108 508 115 HOH HOH . G 4 HOH A 109 509 43 HOH HOH . G 4 HOH A 110 510 52 HOH HOH . G 4 HOH A 111 511 183 HOH HOH . G 4 HOH A 112 512 31 HOH HOH . G 4 HOH A 113 513 134 HOH HOH . G 4 HOH A 114 514 36 HOH HOH . G 4 HOH A 115 515 15 HOH HOH . G 4 HOH A 116 516 194 HOH HOH . G 4 HOH A 117 517 56 HOH HOH . G 4 HOH A 118 518 25 HOH HOH . G 4 HOH A 119 519 61 HOH HOH . G 4 HOH A 120 520 21 HOH HOH . G 4 HOH A 121 521 83 HOH HOH . G 4 HOH A 122 522 172 HOH HOH . G 4 HOH A 123 523 85 HOH HOH . G 4 HOH A 124 524 78 HOH HOH . G 4 HOH A 125 525 184 HOH HOH . G 4 HOH A 126 526 148 HOH HOH . G 4 HOH A 127 527 145 HOH HOH . G 4 HOH A 128 528 160 HOH HOH . G 4 HOH A 129 529 223 HOH HOH . G 4 HOH A 130 530 108 HOH HOH . G 4 HOH A 131 531 92 HOH HOH . G 4 HOH A 132 532 37 HOH HOH . G 4 HOH A 133 533 89 HOH HOH . G 4 HOH A 134 534 133 HOH HOH . G 4 HOH A 135 535 19 HOH HOH . G 4 HOH A 136 536 76 HOH HOH . G 4 HOH A 137 537 126 HOH HOH . G 4 HOH A 138 538 102 HOH HOH . G 4 HOH A 139 539 120 HOH HOH . G 4 HOH A 140 540 24 HOH HOH . G 4 HOH A 141 541 73 HOH HOH . G 4 HOH A 142 542 139 HOH HOH . G 4 HOH A 143 543 151 HOH HOH . G 4 HOH A 144 544 118 HOH HOH . G 4 HOH A 145 545 101 HOH HOH . G 4 HOH A 146 546 59 HOH HOH . G 4 HOH A 147 547 106 HOH HOH . G 4 HOH A 148 548 257 HOH HOH . G 4 HOH A 149 549 63 HOH HOH . G 4 HOH A 150 550 51 HOH HOH . G 4 HOH A 151 551 219 HOH HOH . G 4 HOH A 152 552 57 HOH HOH . G 4 HOH A 153 553 195 HOH HOH . G 4 HOH A 154 554 96 HOH HOH . G 4 HOH A 155 555 87 HOH HOH . G 4 HOH A 156 556 67 HOH HOH . G 4 HOH A 157 557 104 HOH HOH . G 4 HOH A 158 558 16 HOH HOH . G 4 HOH A 159 559 113 HOH HOH . G 4 HOH A 160 560 200 HOH HOH . G 4 HOH A 161 561 50 HOH HOH . G 4 HOH A 162 562 18 HOH HOH . G 4 HOH A 163 563 74 HOH HOH . G 4 HOH A 164 564 213 HOH HOH . G 4 HOH A 165 565 152 HOH HOH . G 4 HOH A 166 566 119 HOH HOH . G 4 HOH A 167 567 17 HOH HOH . G 4 HOH A 168 568 255 HOH HOH . G 4 HOH A 169 569 94 HOH HOH . G 4 HOH A 170 570 163 HOH HOH . G 4 HOH A 171 571 146 HOH HOH . G 4 HOH A 172 572 212 HOH HOH . G 4 HOH A 173 573 90 HOH HOH . G 4 HOH A 174 574 142 HOH HOH . G 4 HOH A 175 575 167 HOH HOH . G 4 HOH A 176 576 77 HOH HOH . G 4 HOH A 177 577 116 HOH HOH . G 4 HOH A 178 578 188 HOH HOH . G 4 HOH A 179 579 261 HOH HOH . G 4 HOH A 180 580 131 HOH HOH . G 4 HOH A 181 581 46 HOH HOH . G 4 HOH A 182 582 221 HOH HOH . G 4 HOH A 183 583 80 HOH HOH . G 4 HOH A 184 584 22 HOH HOH . G 4 HOH A 185 585 206 HOH HOH . G 4 HOH A 186 586 190 HOH HOH . G 4 HOH A 187 587 245 HOH HOH . G 4 HOH A 188 588 253 HOH HOH . G 4 HOH A 189 589 179 HOH HOH . G 4 HOH A 190 590 191 HOH HOH . G 4 HOH A 191 591 215 HOH HOH . G 4 HOH A 192 592 175 HOH HOH . G 4 HOH A 193 593 9 HOH HOH . G 4 HOH A 194 594 260 HOH HOH . G 4 HOH A 195 595 161 HOH HOH . G 4 HOH A 196 596 239 HOH HOH . G 4 HOH A 197 597 135 HOH HOH . G 4 HOH A 198 598 112 HOH HOH . G 4 HOH A 199 599 149 HOH HOH . G 4 HOH A 200 600 205 HOH HOH . G 4 HOH A 201 601 240 HOH HOH . G 4 HOH A 202 602 199 HOH HOH . G 4 HOH A 203 603 103 HOH HOH . G 4 HOH A 204 604 141 HOH HOH . G 4 HOH A 205 605 144 HOH HOH . G 4 HOH A 206 606 225 HOH HOH . G 4 HOH A 207 607 105 HOH HOH . G 4 HOH A 208 608 137 HOH HOH . G 4 HOH A 209 609 185 HOH HOH . G 4 HOH A 210 610 155 HOH HOH . G 4 HOH A 211 611 159 HOH HOH . G 4 HOH A 212 612 204 HOH HOH . G 4 HOH A 213 613 214 HOH HOH . G 4 HOH A 214 614 143 HOH HOH . G 4 HOH A 215 615 249 HOH HOH . G 4 HOH A 216 616 168 HOH HOH . G 4 HOH A 217 617 235 HOH HOH . G 4 HOH A 218 618 247 HOH HOH . G 4 HOH A 219 619 169 HOH HOH . G 4 HOH A 220 620 81 HOH HOH . G 4 HOH A 221 621 127 HOH HOH . G 4 HOH A 222 622 244 HOH HOH . G 4 HOH A 223 623 157 HOH HOH . G 4 HOH A 224 624 196 HOH HOH . G 4 HOH A 225 625 178 HOH HOH . G 4 HOH A 226 626 258 HOH HOH . G 4 HOH A 227 627 202 HOH HOH . G 4 HOH A 228 628 259 HOH HOH . G 4 HOH A 229 629 248 HOH HOH . G 4 HOH A 230 630 234 HOH HOH . G 4 HOH A 231 631 122 HOH HOH . G 4 HOH A 232 632 186 HOH HOH . G 4 HOH A 233 633 111 HOH HOH . G 4 HOH A 234 634 209 HOH HOH . G 4 HOH A 235 635 180 HOH HOH . G 4 HOH A 236 636 110 HOH HOH . G 4 HOH A 237 637 128 HOH HOH . G 4 HOH A 238 638 230 HOH HOH . G 4 HOH A 239 639 231 HOH HOH . G 4 HOH A 240 640 197 HOH HOH . G 4 HOH A 241 641 256 HOH HOH . G 4 HOH A 242 642 203 HOH HOH . G 4 HOH A 243 643 109 HOH HOH . G 4 HOH A 244 644 69 HOH HOH . G 4 HOH A 245 645 181 HOH HOH . G 4 HOH A 246 646 229 HOH HOH . G 4 HOH A 247 647 192 HOH HOH . G 4 HOH A 248 648 129 HOH HOH . G 4 HOH A 249 649 177 HOH HOH . G 4 HOH A 250 650 226 HOH HOH . G 4 HOH A 251 651 246 HOH HOH . G 4 HOH A 252 652 228 HOH HOH . G 4 HOH A 253 653 125 HOH HOH . G 4 HOH A 254 654 166 HOH HOH . G 4 HOH A 255 655 237 HOH HOH . G 4 HOH A 256 656 252 HOH HOH . G 4 HOH A 257 657 236 HOH HOH . G 4 HOH A 258 658 250 HOH HOH . G 4 HOH A 259 659 154 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 3 2.043 28.928 6.394 1 59.04 ? S SO4 304 A 1 HETATM 2 O O1 SO4 . . . E 3 2.043 30.348 6.666 1 59.61 ? O1 SO4 304 A 1 HETATM 3 O O2 SO4 . . . E 3 2.354 28.711 5.011 1 70.19 ? O2 SO4 304 A 1 HETATM 4 O O3 SO4 . . . E 3 3.032 28.282 7.213 1 69.07 ? O3 SO4 304 A 1 HETATM 5 O O4 SO4 . . . E 3 0.758 28.361 6.691 1 53.34 ? O4 SO4 304 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #