data_7PYR # _model_server_result.job_id AV-13OWlj-HVgghDDt-qRg _model_server_result.datetime_utc '2024-11-26 11:09:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pyr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":2435}' # _entry.id 7PYR # _exptl.entry_id 7PYR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7PYR _cell.length_a 39.31 _cell.length_b 180.11 _cell.length_c 140.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PYR _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 IA N N ? 6 JA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 71 1_555 A SG CYS 184 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 99 A CYS 74 1_555 A SG CYS 171 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 A SG CYS 102 A CYS 77 1_555 A SG CYS 191 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 380 A CYS 259 1_555 A SG CYS 383 A CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 583 n n C1 C2 PEG sing 584 n n C1 H11 PEG sing 585 n n C1 H12 PEG sing 586 n n O1 HO1 PEG sing 587 n n C2 O2 PEG sing 588 n n C2 H21 PEG sing 589 n n C2 H22 PEG sing 590 n n O2 C3 PEG sing 591 n n C3 C4 PEG sing 592 n n C3 H31 PEG sing 593 n n C3 H32 PEG sing 594 n n C4 O4 PEG sing 595 n n C4 H41 PEG sing 596 n n C4 H42 PEG sing 597 n n O4 HO4 PEG sing 598 n n # _atom_sites.entry_id 7PYR _atom_sites.fract_transf_matrix[1][1] 0.025439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005552 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007123 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CLR A 1 2401 2401 CLR CLR . C 2 CLR A 1 2402 2402 CLR CLR . D 2 CLR A 1 2403 2403 CLR CLR . E 3 8IM A 1 2404 2404 8IM TKP . F 4 OLA A 1 2405 2405 OLA OLA . G 4 OLA A 1 2406 2406 OLA OLA . H 4 OLA A 1 2407 2407 OLA OLA . I 4 OLA A 1 2408 2408 OLA OLA . J 4 OLA A 1 2409 2409 OLA OLA . K 4 OLA A 1 2410 2410 OLA OLA . L 4 OLA A 1 2411 2411 OLA OLA . M 4 OLA A 1 2412 2412 OLA OLA . N 4 OLA A 1 2413 2413 OLA OLA . O 4 OLA A 1 2414 2414 OLA OLA . P 4 OLA A 1 2415 2415 OLA OLA . Q 4 OLA A 1 2416 2416 OLA OLA . R 4 OLA A 1 2417 2417 OLA OLA . S 4 OLA A 1 2418 2418 OLA OLA . T 4 OLA A 1 2419 2419 OLA OLA . U 4 OLA A 1 2420 2420 OLA OLA . V 4 OLA A 1 2421 2421 OLA OLA . W 4 OLA A 1 2422 2422 OLA OLA . X 4 OLA A 1 2423 2423 OLA OLA . Y 4 OLA A 1 2424 2424 OLA OLA . Z 4 OLA A 1 2425 2425 OLA OLA . AA 4 OLA A 1 2426 2426 OLA OLA . BA 4 OLA A 1 2427 2427 OLA OLA . CA 4 OLA A 1 2428 2428 OLA OLA . DA 4 OLA A 1 2429 2429 OLA OLA . EA 5 OLC A 1 2430 2430 OLC OLC . FA 5 OLC A 1 2431 2431 OLC OLC . GA 5 OLC A 1 2432 2432 OLC OLC . HA 5 OLC A 1 2433 2433 OLC OLC . IA 6 PEG A 1 2434 2434 PEG PEG . JA 6 PEG A 1 2435 2435 PEG PEG . KA 7 HOH A 1 2501 79 HOH HOH . KA 7 HOH A 2 2502 55 HOH HOH . KA 7 HOH A 3 2503 20 HOH HOH . KA 7 HOH A 4 2504 144 HOH HOH . KA 7 HOH A 5 2505 102 HOH HOH . KA 7 HOH A 6 2506 166 HOH HOH . KA 7 HOH A 7 2507 34 HOH HOH . KA 7 HOH A 8 2508 58 HOH HOH . KA 7 HOH A 9 2509 62 HOH HOH . KA 7 HOH A 10 2510 113 HOH HOH . KA 7 HOH A 11 2511 29 HOH HOH . KA 7 HOH A 12 2512 9 HOH HOH . KA 7 HOH A 13 2513 81 HOH HOH . KA 7 HOH A 14 2514 21 HOH HOH . KA 7 HOH A 15 2515 88 HOH HOH . KA 7 HOH A 16 2516 78 HOH HOH . KA 7 HOH A 17 2517 10 HOH HOH . KA 7 HOH A 18 2518 148 HOH HOH . KA 7 HOH A 19 2519 23 HOH HOH . KA 7 HOH A 20 2520 135 HOH HOH . KA 7 HOH A 21 2521 201 HOH HOH . KA 7 HOH A 22 2522 16 HOH HOH . KA 7 HOH A 23 2523 107 HOH HOH . KA 7 HOH A 24 2524 49 HOH HOH . KA 7 HOH A 25 2525 179 HOH HOH . KA 7 HOH A 26 2526 142 HOH HOH . KA 7 HOH A 27 2527 7 HOH HOH . KA 7 HOH A 28 2528 86 HOH HOH . KA 7 HOH A 29 2529 110 HOH HOH . KA 7 HOH A 30 2530 2 HOH HOH . KA 7 HOH A 31 2531 46 HOH HOH . KA 7 HOH A 32 2532 12 HOH HOH . KA 7 HOH A 33 2533 80 HOH HOH . KA 7 HOH A 34 2534 26 HOH HOH . KA 7 HOH A 35 2535 66 HOH HOH . KA 7 HOH A 36 2536 116 HOH HOH . KA 7 HOH A 37 2537 192 HOH HOH . KA 7 HOH A 38 2538 50 HOH HOH . KA 7 HOH A 39 2539 36 HOH HOH . KA 7 HOH A 40 2540 15 HOH HOH . KA 7 HOH A 41 2541 8 HOH HOH . KA 7 HOH A 42 2542 17 HOH HOH . KA 7 HOH A 43 2543 3 HOH HOH . KA 7 HOH A 44 2544 194 HOH HOH . KA 7 HOH A 45 2545 51 HOH HOH . KA 7 HOH A 46 2546 180 HOH HOH . KA 7 HOH A 47 2547 45 HOH HOH . KA 7 HOH A 48 2548 5 HOH HOH . KA 7 HOH A 49 2549 94 HOH HOH . KA 7 HOH A 50 2550 56 HOH HOH . KA 7 HOH A 51 2551 13 HOH HOH . KA 7 HOH A 52 2552 52 HOH HOH . KA 7 HOH A 53 2553 109 HOH HOH . KA 7 HOH A 54 2554 41 HOH HOH . KA 7 HOH A 55 2555 104 HOH HOH . KA 7 HOH A 56 2556 30 HOH HOH . KA 7 HOH A 57 2557 1 HOH HOH . KA 7 HOH A 58 2558 131 HOH HOH . KA 7 HOH A 59 2559 39 HOH HOH . KA 7 HOH A 60 2560 95 HOH HOH . KA 7 HOH A 61 2561 44 HOH HOH . KA 7 HOH A 62 2562 90 HOH HOH . KA 7 HOH A 63 2563 117 HOH HOH . KA 7 HOH A 64 2564 174 HOH HOH . KA 7 HOH A 65 2565 75 HOH HOH . KA 7 HOH A 66 2566 6 HOH HOH . KA 7 HOH A 67 2567 118 HOH HOH . KA 7 HOH A 68 2568 38 HOH HOH . KA 7 HOH A 69 2569 18 HOH HOH . KA 7 HOH A 70 2570 48 HOH HOH . KA 7 HOH A 71 2571 103 HOH HOH . KA 7 HOH A 72 2572 67 HOH HOH . KA 7 HOH A 73 2573 143 HOH HOH . KA 7 HOH A 74 2574 25 HOH HOH . KA 7 HOH A 75 2575 115 HOH HOH . KA 7 HOH A 76 2576 155 HOH HOH . KA 7 HOH A 77 2577 138 HOH HOH . KA 7 HOH A 78 2578 176 HOH HOH . KA 7 HOH A 79 2579 32 HOH HOH . KA 7 HOH A 80 2580 28 HOH HOH . KA 7 HOH A 81 2581 169 HOH HOH . KA 7 HOH A 82 2582 205 HOH HOH . KA 7 HOH A 83 2583 132 HOH HOH . KA 7 HOH A 84 2584 14 HOH HOH . KA 7 HOH A 85 2585 84 HOH HOH . KA 7 HOH A 86 2586 65 HOH HOH . KA 7 HOH A 87 2587 141 HOH HOH . KA 7 HOH A 88 2588 163 HOH HOH . KA 7 HOH A 89 2589 57 HOH HOH . KA 7 HOH A 90 2590 31 HOH HOH . KA 7 HOH A 91 2591 24 HOH HOH . KA 7 HOH A 92 2592 89 HOH HOH . KA 7 HOH A 93 2593 60 HOH HOH . KA 7 HOH A 94 2594 64 HOH HOH . KA 7 HOH A 95 2595 27 HOH HOH . KA 7 HOH A 96 2596 134 HOH HOH . KA 7 HOH A 97 2597 178 HOH HOH . KA 7 HOH A 98 2598 40 HOH HOH . KA 7 HOH A 99 2599 93 HOH HOH . KA 7 HOH A 100 2600 73 HOH HOH . KA 7 HOH A 101 2601 37 HOH HOH . KA 7 HOH A 102 2602 175 HOH HOH . KA 7 HOH A 103 2603 122 HOH HOH . KA 7 HOH A 104 2604 72 HOH HOH . KA 7 HOH A 105 2605 164 HOH HOH . KA 7 HOH A 106 2606 68 HOH HOH . KA 7 HOH A 107 2607 170 HOH HOH . KA 7 HOH A 108 2608 159 HOH HOH . KA 7 HOH A 109 2609 171 HOH HOH . KA 7 HOH A 110 2610 69 HOH HOH . KA 7 HOH A 111 2611 114 HOH HOH . KA 7 HOH A 112 2612 54 HOH HOH . KA 7 HOH A 113 2613 71 HOH HOH . KA 7 HOH A 114 2614 22 HOH HOH . KA 7 HOH A 115 2615 33 HOH HOH . KA 7 HOH A 116 2616 203 HOH HOH . KA 7 HOH A 117 2617 70 HOH HOH . KA 7 HOH A 118 2618 145 HOH HOH . KA 7 HOH A 119 2619 11 HOH HOH . KA 7 HOH A 120 2620 121 HOH HOH . KA 7 HOH A 121 2621 74 HOH HOH . KA 7 HOH A 122 2622 35 HOH HOH . KA 7 HOH A 123 2623 108 HOH HOH . KA 7 HOH A 124 2624 61 HOH HOH . KA 7 HOH A 125 2625 165 HOH HOH . KA 7 HOH A 126 2626 127 HOH HOH . KA 7 HOH A 127 2627 4 HOH HOH . KA 7 HOH A 128 2628 43 HOH HOH . KA 7 HOH A 129 2629 92 HOH HOH . KA 7 HOH A 130 2630 177 HOH HOH . KA 7 HOH A 131 2631 206 HOH HOH . KA 7 HOH A 132 2632 82 HOH HOH . KA 7 HOH A 133 2633 137 HOH HOH . KA 7 HOH A 134 2634 184 HOH HOH . KA 7 HOH A 135 2635 136 HOH HOH . KA 7 HOH A 136 2636 87 HOH HOH . KA 7 HOH A 137 2637 139 HOH HOH . KA 7 HOH A 138 2638 83 HOH HOH . KA 7 HOH A 139 2639 19 HOH HOH . KA 7 HOH A 140 2640 99 HOH HOH . KA 7 HOH A 141 2641 77 HOH HOH . KA 7 HOH A 142 2642 47 HOH HOH . KA 7 HOH A 143 2643 100 HOH HOH . KA 7 HOH A 144 2644 193 HOH HOH . KA 7 HOH A 145 2645 133 HOH HOH . KA 7 HOH A 146 2646 53 HOH HOH . KA 7 HOH A 147 2647 130 HOH HOH . KA 7 HOH A 148 2648 149 HOH HOH . KA 7 HOH A 149 2649 105 HOH HOH . KA 7 HOH A 150 2650 120 HOH HOH . KA 7 HOH A 151 2651 190 HOH HOH . KA 7 HOH A 152 2652 157 HOH HOH . KA 7 HOH A 153 2653 59 HOH HOH . KA 7 HOH A 154 2654 96 HOH HOH . KA 7 HOH A 155 2655 126 HOH HOH . KA 7 HOH A 156 2656 119 HOH HOH . KA 7 HOH A 157 2657 196 HOH HOH . KA 7 HOH A 158 2658 85 HOH HOH . KA 7 HOH A 159 2659 146 HOH HOH . KA 7 HOH A 160 2660 204 HOH HOH . KA 7 HOH A 161 2661 173 HOH HOH . KA 7 HOH A 162 2662 181 HOH HOH . KA 7 HOH A 163 2663 156 HOH HOH . KA 7 HOH A 164 2664 182 HOH HOH . KA 7 HOH A 165 2665 63 HOH HOH . KA 7 HOH A 166 2666 168 HOH HOH . KA 7 HOH A 167 2667 147 HOH HOH . KA 7 HOH A 168 2668 160 HOH HOH . KA 7 HOH A 169 2669 150 HOH HOH . KA 7 HOH A 170 2670 195 HOH HOH . KA 7 HOH A 171 2671 123 HOH HOH . KA 7 HOH A 172 2672 202 HOH HOH . KA 7 HOH A 173 2673 124 HOH HOH . KA 7 HOH A 174 2674 98 HOH HOH . KA 7 HOH A 175 2675 186 HOH HOH . KA 7 HOH A 176 2676 106 HOH HOH . KA 7 HOH A 177 2677 158 HOH HOH . KA 7 HOH A 178 2678 97 HOH HOH . KA 7 HOH A 179 2679 172 HOH HOH . KA 7 HOH A 180 2680 167 HOH HOH . KA 7 HOH A 181 2681 183 HOH HOH . KA 7 HOH A 182 2682 189 HOH HOH . KA 7 HOH A 183 2683 129 HOH HOH . KA 7 HOH A 184 2684 76 HOH HOH . KA 7 HOH A 185 2685 128 HOH HOH . KA 7 HOH A 186 2686 101 HOH HOH . KA 7 HOH A 187 2687 161 HOH HOH . KA 7 HOH A 188 2688 111 HOH HOH . KA 7 HOH A 189 2689 42 HOH HOH . KA 7 HOH A 190 2690 153 HOH HOH . KA 7 HOH A 191 2691 197 HOH HOH . KA 7 HOH A 192 2692 187 HOH HOH . KA 7 HOH A 193 2693 199 HOH HOH . KA 7 HOH A 194 2694 185 HOH HOH . KA 7 HOH A 195 2695 200 HOH HOH . KA 7 HOH A 196 2696 198 HOH HOH . KA 7 HOH A 197 2697 140 HOH HOH . KA 7 HOH A 198 2698 162 HOH HOH . KA 7 HOH A 199 2699 152 HOH HOH . KA 7 HOH A 200 2700 151 HOH HOH . KA 7 HOH A 201 2701 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . JA 6 10.033 -23.568 34.807 1 80.84 ? C1 PEG 2435 A 1 HETATM 2 O O1 PEG . . . JA 6 8.684 -23.903 35.085 1 95.97 ? O1 PEG 2435 A 1 HETATM 3 C C2 PEG . . . JA 6 10.293 -22.113 35.044 1 82.82 ? C2 PEG 2435 A 1 HETATM 4 O O2 PEG . . . JA 6 11.655 -21.823 34.764 1 80.31 ? O2 PEG 2435 A 1 HETATM 5 C C3 PEG . . . JA 6 12.167 -20.766 35.559 1 76.39 ? C3 PEG 2435 A 1 HETATM 6 C C4 PEG . . . JA 6 13.605 -20.528 35.219 1 76.1 ? C4 PEG 2435 A 1 HETATM 7 O O4 PEG . . . JA 6 14.359 -21.722 35.34 1 92.99 ? O4 PEG 2435 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #