data_7PZ4 # _model_server_result.job_id gDNoAHWPTKE-qWnIuN9mqw _model_server_result.datetime_utc '2024-10-15 11:21:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7pz4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 7PZ4 # _exptl.entry_id 7PZ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 72.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACRYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.96 _cell.angle_gamma 90 _cell.entry_id 7PZ4 _cell.length_a 34.45 _cell.length_b 87.37 _cell.length_c 37.39 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7PZ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 56 A CYS 56 1_555 A SG CYS 178 A CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf2 A SG CYS 97 A CYS 97 1_555 A SG CYS 101 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? covale ? covale1 A C HIC 1 A HIC 1 1_555 A N GLY 2 A GLY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A ND2 ASN 138 A ASN 138 1_555 D C1 NAG . A NAG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? metalc ? metalc1 A N HIC 1 A HIC 1 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc2 A ND1 HIC 1 A HIC 1 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc3 A NE2 HIS 86 A HIS 86 1_555 B CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc4 B CU CU . A CU 301 1_555 F O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc5 B CU CU . A CU 301 1_555 F O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? # _chem_comp.formula 'C3 H4 O2' _chem_comp.formula_weight 72.063 _chem_comp.id AKR _chem_comp.mon_nstd_flag . _chem_comp.name 'ACRYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA CB AKR doub 1 n n CA C AKR sing 2 n n CA HA1 AKR sing 3 n n CB HB2 AKR sing 4 n n CB HB3 AKR sing 5 n n C O AKR doub 6 n n C OXT AKR sing 7 n n OXT HXT AKR sing 8 n n # _atom_sites.entry_id 7PZ4 _atom_sites.fract_transf_matrix[1][1] 0.029028 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007757 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011446 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 301 301 CU CU . C 3 AKR A 1 302 401 AKR AKR . D 4 NAG A 1 303 501 NAG NAG . E 5 EPE A 1 304 601 EPE EPE . F 6 HOH A 1 401 65 HOH HOH . F 6 HOH A 2 402 13 HOH HOH . F 6 HOH A 3 403 60 HOH HOH . F 6 HOH A 4 404 27 HOH HOH . F 6 HOH A 5 405 55 HOH HOH . F 6 HOH A 6 406 44 HOH HOH . F 6 HOH A 7 407 61 HOH HOH . F 6 HOH A 8 408 49 HOH HOH . F 6 HOH A 9 409 43 HOH HOH . F 6 HOH A 10 410 22 HOH HOH . F 6 HOH A 11 411 12 HOH HOH . F 6 HOH A 12 412 25 HOH HOH . F 6 HOH A 13 413 2 HOH HOH . F 6 HOH A 14 414 1 HOH HOH . F 6 HOH A 15 415 37 HOH HOH . F 6 HOH A 16 416 33 HOH HOH . F 6 HOH A 17 417 58 HOH HOH . F 6 HOH A 18 418 11 HOH HOH . F 6 HOH A 19 419 46 HOH HOH . F 6 HOH A 20 420 21 HOH HOH . F 6 HOH A 21 421 59 HOH HOH . F 6 HOH A 22 422 31 HOH HOH . F 6 HOH A 23 423 9 HOH HOH . F 6 HOH A 24 424 45 HOH HOH . F 6 HOH A 25 425 52 HOH HOH . F 6 HOH A 26 426 19 HOH HOH . F 6 HOH A 27 427 3 HOH HOH . F 6 HOH A 28 428 16 HOH HOH . F 6 HOH A 29 429 32 HOH HOH . F 6 HOH A 30 430 7 HOH HOH . F 6 HOH A 31 431 38 HOH HOH . F 6 HOH A 32 432 53 HOH HOH . F 6 HOH A 33 433 36 HOH HOH . F 6 HOH A 34 434 28 HOH HOH . F 6 HOH A 35 435 40 HOH HOH . F 6 HOH A 36 436 17 HOH HOH . F 6 HOH A 37 437 8 HOH HOH . F 6 HOH A 38 438 34 HOH HOH . F 6 HOH A 39 439 48 HOH HOH . F 6 HOH A 40 440 18 HOH HOH . F 6 HOH A 41 441 5 HOH HOH . F 6 HOH A 42 442 47 HOH HOH . F 6 HOH A 43 443 63 HOH HOH . F 6 HOH A 44 444 15 HOH HOH . F 6 HOH A 45 445 23 HOH HOH . F 6 HOH A 46 446 14 HOH HOH . F 6 HOH A 47 447 50 HOH HOH . F 6 HOH A 48 448 35 HOH HOH . F 6 HOH A 49 449 56 HOH HOH . F 6 HOH A 50 450 10 HOH HOH . F 6 HOH A 51 451 41 HOH HOH . F 6 HOH A 52 452 57 HOH HOH . F 6 HOH A 53 453 4 HOH HOH . F 6 HOH A 54 454 30 HOH HOH . F 6 HOH A 55 455 54 HOH HOH . F 6 HOH A 56 456 64 HOH HOH . F 6 HOH A 57 457 62 HOH HOH . F 6 HOH A 58 458 26 HOH HOH . F 6 HOH A 59 459 29 HOH HOH . F 6 HOH A 60 460 6 HOH HOH . F 6 HOH A 61 461 39 HOH HOH . F 6 HOH A 62 462 20 HOH HOH . F 6 HOH A 63 463 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA AKR . . . C 3 2.767 17.441 7.87 1 31.2 ? CA AKR 302 A 1 HETATM 2 C CB AKR . . . C 3 3.943 17.982 8.005 1 31.92 ? CB AKR 302 A 1 HETATM 3 C C AKR . . . C 3 1.538 18.151 7.893 1 31.46 ? C AKR 302 A 1 HETATM 4 O O AKR . . . C 3 0.513 17.519 7.837 1 31.46 ? O AKR 302 A 1 HETATM 5 O OXT AKR . . . C 3 1.576 19.378 7.947 1 36.03 ? OXT AKR 302 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #