data_7PZU
#
_model_server_result.job_id            yaGCDiUDMSqa-fZ0y8EPWw 
_model_server_result.datetime_utc      '2024-10-12 03:21:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7pzu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    7PZU 
#
_exptl.entry_id    7PZU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              619.701 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2S,4S)-N-((3R,5R)-1-(cyclopropanecarbonyl)-5-((3-fluoro-4-((4-(morpholinomethyl)phenyl)ethynyl)benzamido)methyl)pyrrolidin-3-yl)-4-fluoropyrrolidine-2-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.21 
_cell.angle_gamma         90 
_cell.entry_id            7PZU 
_cell.length_a            35.9 
_cell.length_b            67.04 
_cell.length_c            63 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7PZU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 91 A HIS 78 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
metalc ? metalc2 A NE2 HIS 250 A HIS 237 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc3 A OD1 ASP 254 A ASP 241 1_555 B ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc4 B ZN ZN . A ZN 501 1_555 C O27 99I . A 99I 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc5 B ZN ZN . A ZN 501 1_555 C N29 99I . A 99I 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? 
#
_chem_comp.formula           'C34 H39 F2 N5 O4' 
_chem_comp.formula_weight    619.701 
_chem_comp.id                99I 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2S,4S)-N-((3R,5R)-1-(cyclopropanecarbonyl)-5-((3-fluoro-4-((4-(morpholinomethyl)phenyl)ethynyl)benzamido)methyl)pyrrolidin-3-yl)-4-fluoropyrrolidine-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     (2S,4S)-N-[(3R,5R)-1-cyclopropylcarbonyl-5-[[[3-fluoranyl-4-[2-[4-(morpholin-4-ylmethyl)phenyl]ethynyl]phenyl]carbonylamino]methyl]pyrrolidin-3-yl]-4-fluoranyl-pyrrolidine-2-carboxamide 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N29 C30 99I sing 1 n n 
N29 C28 99I sing 2 n n 
C30 C31 99I sing 3 n n 
C28 C26 99I sing 4 n n 
C28 C32 99I sing 5 n n 
O27 C26 99I doub 6 n n 
C26 N1 99I sing 7 n n 
C32 C31 99I sing 8 n n 
C31 F33 99I sing 9 n n 
N1 C2 99I sing 10 n n 
C2 C6 99I sing 11 n n 
C2 C3 99I sing 12 n n 
C6 N5 99I sing 13 n n 
C3 C4 99I sing 14 n n 
N5 C4 99I sing 15 n n 
N5 C17 99I sing 16 n n 
C4 C7 99I sing 17 n n 
O18 C17 99I doub 18 n n 
C7 N8 99I sing 19 n n 
C17 C19 99I sing 20 n n 
N8 C9 99I sing 21 n n 
O10 C9 99I doub 22 n n 
C9 C11 99I sing 23 n n 
C12 C11 99I doub 24 n y 
C12 C13 99I sing 25 n y 
C11 C16 99I sing 26 n y 
C19 C21 99I sing 27 n n 
C19 C20 99I sing 28 n n 
C13 C14 99I doub 29 n y 
C21 C20 99I sing 30 n n 
C16 C15 99I doub 31 n y 
C14 C15 99I sing 32 n y 
C14 C34 99I sing 33 n n 
C15 F1 99I sing 34 n n 
C34 C35 99I trip 35 n n 
C35 C36 99I sing 36 n n 
C41 C36 99I doub 37 n y 
C41 C40 99I sing 38 n y 
C36 C37 99I sing 39 n y 
C40 C39 99I doub 40 n y 
C37 C38 99I doub 41 n y 
C39 C38 99I sing 42 n y 
C39 C42 99I sing 43 n n 
C42 N43 99I sing 44 n n 
N43 C44 99I sing 45 n n 
N43 C48 99I sing 46 n n 
C44 C45 99I sing 47 n n 
C48 C47 99I sing 48 n n 
C45 O46 99I sing 49 n n 
C47 O46 99I sing 50 n n 
N1 H1 99I sing 51 n n 
C2 H2 99I sing 52 n n 
C4 H3 99I sing 53 n n 
C6 H4 99I sing 54 n n 
C6 H5 99I sing 55 n n 
C7 H6 99I sing 56 n n 
C7 H7 99I sing 57 n n 
C3 H8 99I sing 58 n n 
C3 H9 99I sing 59 n n 
N8 H10 99I sing 60 n n 
C12 H11 99I sing 61 n n 
C13 H12 99I sing 62 n n 
C16 H13 99I sing 63 n n 
C19 H14 99I sing 64 n n 
C20 H15 99I sing 65 n n 
C20 H16 99I sing 66 n n 
C21 H17 99I sing 67 n n 
C21 H18 99I sing 68 n n 
C28 H19 99I sing 69 n n 
N29 H20 99I sing 70 n n 
C30 H22 99I sing 71 n n 
C30 H23 99I sing 72 n n 
C31 H24 99I sing 73 n n 
C32 H25 99I sing 74 n n 
C32 H26 99I sing 75 n n 
C37 H27 99I sing 76 n n 
C38 H28 99I sing 77 n n 
C40 H29 99I sing 78 n n 
C41 H30 99I sing 79 n n 
C42 H31 99I sing 80 n n 
C42 H32 99I sing 81 n n 
C44 H34 99I sing 82 n n 
C44 H35 99I sing 83 n n 
C45 H36 99I sing 84 n n 
C45 H37 99I sing 85 n n 
C47 H38 99I sing 86 n n 
C47 H39 99I sing 87 n n 
C48 H40 99I sing 88 n n 
C48 H41 99I sing 89 n n 
#
_atom_sites.entry_id                     7PZU 
_atom_sites.fract_transf_matrix[1][1]    0.027855 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000102 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014916 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015873 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 501 501 ZN ZN . 
C 3 99I A 1 502 1 99I 817 . 
D 4 HOH A 1 601 85 HOH HOH . 
D 4 HOH A 2 602 77 HOH HOH . 
D 4 HOH A 3 603 86 HOH HOH . 
D 4 HOH A 4 604 9 HOH HOH . 
D 4 HOH A 5 605 68 HOH HOH . 
D 4 HOH A 6 606 72 HOH HOH . 
D 4 HOH A 7 607 84 HOH HOH . 
D 4 HOH A 8 608 58 HOH HOH . 
D 4 HOH A 9 609 83 HOH HOH . 
D 4 HOH A 10 610 87 HOH HOH . 
D 4 HOH A 11 611 79 HOH HOH . 
D 4 HOH A 12 612 21 HOH HOH . 
D 4 HOH A 13 613 29 HOH HOH . 
D 4 HOH A 14 614 56 HOH HOH . 
D 4 HOH A 15 615 81 HOH HOH . 
D 4 HOH A 16 616 33 HOH HOH . 
D 4 HOH A 17 617 15 HOH HOH . 
D 4 HOH A 18 618 71 HOH HOH . 
D 4 HOH A 19 619 69 HOH HOH . 
D 4 HOH A 20 620 46 HOH HOH . 
D 4 HOH A 21 621 49 HOH HOH . 
D 4 HOH A 22 622 61 HOH HOH . 
D 4 HOH A 23 623 60 HOH HOH . 
D 4 HOH A 24 624 27 HOH HOH . 
D 4 HOH A 25 625 6 HOH HOH . 
D 4 HOH A 26 626 34 HOH HOH . 
D 4 HOH A 27 627 88 HOH HOH . 
D 4 HOH A 28 628 82 HOH HOH . 
D 4 HOH A 29 629 37 HOH HOH . 
D 4 HOH A 30 630 62 HOH HOH . 
D 4 HOH A 31 631 5 HOH HOH . 
D 4 HOH A 32 632 10 HOH HOH . 
D 4 HOH A 33 633 51 HOH HOH . 
D 4 HOH A 34 634 18 HOH HOH . 
D 4 HOH A 35 635 16 HOH HOH . 
D 4 HOH A 36 636 53 HOH HOH . 
D 4 HOH A 37 637 45 HOH HOH . 
D 4 HOH A 38 638 24 HOH HOH . 
D 4 HOH A 39 639 63 HOH HOH . 
D 4 HOH A 40 640 38 HOH HOH . 
D 4 HOH A 41 641 14 HOH HOH . 
D 4 HOH A 42 642 54 HOH HOH . 
D 4 HOH A 43 643 80 HOH HOH . 
D 4 HOH A 44 644 70 HOH HOH . 
D 4 HOH A 45 645 44 HOH HOH . 
D 4 HOH A 46 646 32 HOH HOH . 
D 4 HOH A 47 647 65 HOH HOH . 
D 4 HOH A 48 648 57 HOH HOH . 
D 4 HOH A 49 649 13 HOH HOH . 
D 4 HOH A 50 650 19 HOH HOH . 
D 4 HOH A 51 651 75 HOH HOH . 
D 4 HOH A 52 652 67 HOH HOH . 
D 4 HOH A 53 653 59 HOH HOH . 
D 4 HOH A 54 654 11 HOH HOH . 
D 4 HOH A 55 655 30 HOH HOH . 
D 4 HOH A 56 656 47 HOH HOH . 
D 4 HOH A 57 657 66 HOH HOH . 
D 4 HOH A 58 658 2 HOH HOH . 
D 4 HOH A 59 659 12 HOH HOH . 
D 4 HOH A 60 660 1 HOH HOH . 
D 4 HOH A 61 661 73 HOH HOH . 
D 4 HOH A 62 662 25 HOH HOH . 
D 4 HOH A 63 663 3 HOH HOH . 
D 4 HOH A 64 664 8 HOH HOH . 
D 4 HOH A 65 665 64 HOH HOH . 
D 4 HOH A 66 666 40 HOH HOH . 
D 4 HOH A 67 667 42 HOH HOH . 
D 4 HOH A 68 668 17 HOH HOH . 
D 4 HOH A 69 669 41 HOH HOH . 
D 4 HOH A 70 670 36 HOH HOH . 
D 4 HOH A 71 671 31 HOH HOH . 
D 4 HOH A 72 672 52 HOH HOH . 
D 4 HOH A 73 673 43 HOH HOH . 
D 4 HOH A 74 674 26 HOH HOH . 
D 4 HOH A 75 675 35 HOH HOH . 
D 4 HOH A 76 676 22 HOH HOH . 
D 4 HOH A 77 677 7 HOH HOH . 
D 4 HOH A 78 678 23 HOH HOH . 
D 4 HOH A 79 679 50 HOH HOH . 
D 4 HOH A 80 680 20 HOH HOH . 
D 4 HOH A 81 681 74 HOH HOH . 
D 4 HOH A 82 682 55 HOH HOH . 
D 4 HOH A 83 683 39 HOH HOH . 
D 4 HOH A 84 684 78 HOH HOH . 
D 4 HOH A 85 685 48 HOH HOH . 
D 4 HOH A 86 686 28 HOH HOH . 
D 4 HOH A 87 687 76 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 99I . . . C 3 7.739 -16.415 22.698 1 30.8 ? N1 99I 502 A 1 
HETATM 2 C C2 99I . . . C 3 7.178 -17.631 23.253 1 33.99 ? C2 99I 502 A 1 
HETATM 3 C C4 99I . . . C 3 6.971 -17.396 25.656 1 36.66 ? C4 99I 502 A 1 
HETATM 4 C C6 99I . . . C 3 8.282 -18.448 23.91 1 33.67 ? C6 99I 502 A 1 
HETATM 5 C C7 99I . . . C 3 7.43 -15.993 26.044 1 37.81 ? C7 99I 502 A 1 
HETATM 6 C C9 99I . . . C 3 6.373 -13.981 26.95 1 40.91 ? C9 99I 502 A 1 
HETATM 7 C C3 99I . . . C 3 6.179 -17.333 24.358 1 35.98 ? C3 99I 502 A 1 
HETATM 8 F F1 99I . . . C 3 4.595 -11.101 30.419 1 57.46 ? F1 99I 502 A 1 
HETATM 9 N N5 99I . . . C 3 8.134 -18.224 25.343 1 34.66 ? N5 99I 502 A 1 
HETATM 10 N N8 99I . . . C 3 6.326 -15.28 26.661 1 40.37 ? N8 99I 502 A 1 
HETATM 11 O O10 99I . . . C 3 7.353 -13.301 26.699 1 49.69 ? O10 99I 502 A 1 
HETATM 12 C C11 99I . . . C 3 5.191 -13.35 27.628 1 41.46 ? C11 99I 502 A 1 
HETATM 13 C C12 99I . . . C 3 3.892 -13.603 27.193 1 38.89 ? C12 99I 502 A 1 
HETATM 14 C C13 99I . . . C 3 2.793 -13.024 27.827 1 38.67 ? C13 99I 502 A 1 
HETATM 15 C C14 99I . . . C 3 2.97 -12.173 28.91 1 38.57 ? C14 99I 502 A 1 
HETATM 16 C C15 99I . . . C 3 4.357 -11.911 29.373 1 42.06 ? C15 99I 502 A 1 
HETATM 17 C C16 99I . . . C 3 5.42 -12.51 28.712 1 42.74 ? C16 99I 502 A 1 
HETATM 18 C C17 99I . . . C 3 8.943 -18.717 26.28 1 36.12 ? C17 99I 502 A 1 
HETATM 19 O O18 99I . . . C 3 9.923 -19.392 26.007 1 33.75 ? O18 99I 502 A 1 
HETATM 20 C C19 99I . . . C 3 8.62 -18.426 27.717 1 34.3 ? C19 99I 502 A 1 
HETATM 21 C C20 99I . . . C 3 9.066 -19.486 28.715 1 34.93 ? C20 99I 502 A 1 
HETATM 22 C C21 99I . . . C 3 9.81 -18.159 28.63 1 33.47 ? C21 99I 502 A 1 
HETATM 23 C C26 99I . . . C 3 7.032 -15.598 21.924 1 31.98 ? C26 99I 502 A 1 
HETATM 24 O O27 99I . . . C 3 5.864 -15.805 21.637 1 29.28 ? O27 99I 502 A 1 
HETATM 25 C C28 99I . . . C 3 7.751 -14.383 21.411 1 33.92 ? C28 99I 502 A 1 
HETATM 26 N N29 99I . . . C 3 6.887 -13.634 20.477 1 34.22 ? N29 99I 502 A 1 
HETATM 27 C C30 99I . . . C 3 6.155 -12.619 21.261 1 34.47 ? C30 99I 502 A 1 
HETATM 28 C C31 99I . . . C 3 6.763 -12.584 22.658 1 37 ? C31 99I 502 A 1 
HETATM 29 C C32 99I . . . C 3 8.018 -13.436 22.571 1 35.71 ? C32 99I 502 A 1 
HETATM 30 F F33 99I . . . C 3 5.904 -13.142 23.569 1 41.3 ? F33 99I 502 A 1 
HETATM 31 C C34 99I . . . C 3 1.949 -11.646 29.501 1 39.94 ? C34 99I 502 A 1 
HETATM 32 C C35 99I . . . C 3 1.15 -11.145 30.25 1 39.36 ? C35 99I 502 A 1 
HETATM 33 C C36 99I . . . C 3 0.258 -10.874 31.144 1 38.65 ? C36 99I 502 A 1 
HETATM 34 C C37 99I . . . C 3 0.565 -9.954 32.139 1 40.72 ? C37 99I 502 A 1 
HETATM 35 C C38 99I . . . C 3 -0.367 -9.638 33.124 1 41.11 ? C38 99I 502 A 1 
HETATM 36 C C39 99I . . . C 3 -1.616 -10.249 33.118 1 48.24 ? C39 99I 502 A 1 
HETATM 37 C C40 99I . . . C 3 -1.924 -11.172 32.126 1 44.22 ? C40 99I 502 A 1 
HETATM 38 C C41 99I . . . C 3 -0.993 -11.485 31.143 1 41.46 ? C41 99I 502 A 1 
HETATM 39 C C42 99I . . . C 3 -2.636 -9.912 34.184 1 58.31 ? C42 99I 502 A 1 
HETATM 40 N N43 99I . . . C 3 -2.798 -11.049 35.104 1 72.42 ? N43 99I 502 A 1 
HETATM 41 C C44 99I . . . C 3 -4.154 -11.047 35.673 1 78.25 ? C44 99I 502 A 1 
HETATM 42 C C45 99I . . . C 3 -4.312 -12.208 36.649 1 80.1 ? C45 99I 502 A 1 
HETATM 43 O O46 99I . . . C 3 -3.332 -12.113 37.681 1 80.73 ? O46 99I 502 A 1 
HETATM 44 C C47 99I . . . C 3 -2.006 -12.131 37.155 1 79.66 ? C47 99I 502 A 1 
HETATM 45 C C48 99I . . . C 3 -1.812 -10.965 36.191 1 77.19 ? C48 99I 502 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           45 
#