data_7Q0V # _model_server_result.job_id -hrw43aMxo_WUKOeMd_71A _model_server_result.datetime_utc '2024-11-13 03:10:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q0v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7Q0V # _exptl.entry_id 7Q0V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.205 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,10-PHENANTHROLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Q0V _cell.length_a 77.68 _cell.length_b 77.68 _cell.length_c 37.757 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q0V _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc1 A OD1 ASN 46 A ASN 46 1_555 C V V . A V 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc2 A OD2 ASP 52 A ASP 52 1_555 C V V . A V 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc3 A O SER 60 A SER 60 1_555 H NA NA . A NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc4 A O CYS 64 A CYS 64 1_555 H NA NA . A NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? metalc ? metalc5 A OG SER 72 A SER 72 1_555 H NA NA . A NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc6 A O ARG 73 A ARG 73 1_555 H NA NA . A NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc7 A OD1 ASP 101 A ASP 101 1_555 E V V . A V 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc8 B N1 PHN . A PHN 201 1_555 C V V . A V 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc9 B N10 PHN . A PHN 201 1_555 C V V . A V 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc10 C V V . A V 202 1_555 P O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc11 D V V . A V 203 1_555 P O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc12 E V V . A V 204 1_555 P O HOH . A HOH 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.731 ? metalc ? metalc13 E V V . A V 204 1_555 P O HOH . A HOH 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc14 F V V . A V 205 1_555 P O HOH . A HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc15 F V V . A V 205 1_555 P O HOH . A HOH 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc16 H NA NA . A NA 207 1_555 P O HOH . A HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc17 H NA NA . A NA 207 1_555 P O HOH . A HOH 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? # _chem_comp.formula 'C12 H8 N2' _chem_comp.formula_weight 180.205 _chem_comp.id PHN _chem_comp.mon_nstd_flag . _chem_comp.name 1,10-PHENANTHROLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 PHN doub 266 n y N1 C1A PHN sing 267 n y C2 C3 PHN sing 268 n y C2 H2 PHN sing 269 n n C3 C4 PHN doub 270 n y C3 H3 PHN sing 271 n n C4 C4A PHN sing 272 n y C4 H4 PHN sing 273 n n C4A C5 PHN doub 274 n y C4A C1A PHN sing 275 n y C5 C6 PHN sing 276 n y C5 H5 PHN sing 277 n n C6 C6A PHN doub 278 n y C6 H6 PHN sing 279 n n C6A C7 PHN sing 280 n y C6A C10 PHN sing 281 n y C7 C8 PHN doub 282 n y C7 H7 PHN sing 283 n n C8 C9 PHN sing 284 n y C8 H8 PHN sing 285 n n C9 N10 PHN doub 286 n y C9 H9 PHN sing 287 n n N10 C10 PHN sing 288 n y C10 C1A PHN doub 289 n y # _atom_sites.entry_id 7Q0V _atom_sites.fract_transf_matrix[1][1] 0.012873 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012873 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026485 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PHN A 1 201 1 PHN PHN . C 3 V A 1 202 1 V V . D 3 V A 1 203 2 V V . E 3 V A 1 204 3 V V . F 3 V A 1 205 4 V V . G 4 O A 1 206 1 O O . H 5 NA A 1 207 1 NA NA . I 6 CL A 1 208 1 CL CL . J 6 CL A 1 209 2 CL CL . K 6 CL A 1 210 3 CL CL . L 6 CL A 1 211 4 CL CL . M 6 CL A 1 212 5 CL CL . N 6 CL A 1 213 6 CL CL . O 7 ACT A 1 214 1 ACT ACT . P 8 HOH A 1 301 33 HOH HOH . P 8 HOH A 2 302 86 HOH HOH . P 8 HOH A 3 303 136 HOH HOH . P 8 HOH A 4 304 102 HOH HOH . P 8 HOH A 5 305 105 HOH HOH . P 8 HOH A 6 306 143 HOH HOH . P 8 HOH A 7 307 64 HOH HOH . P 8 HOH A 8 308 25 HOH HOH . P 8 HOH A 9 309 54 HOH HOH . P 8 HOH A 10 310 78 HOH HOH . P 8 HOH A 11 311 99 HOH HOH . P 8 HOH A 12 312 2 HOH HOH . P 8 HOH A 13 313 116 HOH HOH . P 8 HOH A 14 314 18 HOH HOH . P 8 HOH A 15 315 20 HOH HOH . P 8 HOH A 16 316 145 HOH HOH . P 8 HOH A 17 317 37 HOH HOH . P 8 HOH A 18 318 85 HOH HOH . P 8 HOH A 19 319 90 HOH HOH . P 8 HOH A 20 320 135 HOH HOH . P 8 HOH A 21 321 83 HOH HOH . P 8 HOH A 22 322 43 HOH HOH . P 8 HOH A 23 323 65 HOH HOH . P 8 HOH A 24 324 63 HOH HOH . P 8 HOH A 25 325 31 HOH HOH . P 8 HOH A 26 326 93 HOH HOH . P 8 HOH A 27 327 133 HOH HOH . P 8 HOH A 28 328 81 HOH HOH . P 8 HOH A 29 329 61 HOH HOH . P 8 HOH A 30 330 46 HOH HOH . P 8 HOH A 31 331 5 HOH HOH . P 8 HOH A 32 332 34 HOH HOH . P 8 HOH A 33 333 1 HOH HOH . P 8 HOH A 34 334 69 HOH HOH . P 8 HOH A 35 335 114 HOH HOH . P 8 HOH A 36 336 150 HOH HOH . P 8 HOH A 37 337 13 HOH HOH . P 8 HOH A 38 338 88 HOH HOH . P 8 HOH A 39 339 10 HOH HOH . P 8 HOH A 40 340 49 HOH HOH . P 8 HOH A 41 341 123 HOH HOH . P 8 HOH A 42 342 82 HOH HOH . P 8 HOH A 43 343 84 HOH HOH . P 8 HOH A 44 344 12 HOH HOH . P 8 HOH A 45 345 11 HOH HOH . P 8 HOH A 46 346 52 HOH HOH . P 8 HOH A 47 347 92 HOH HOH . P 8 HOH A 48 348 130 HOH HOH . P 8 HOH A 49 349 19 HOH HOH . P 8 HOH A 50 350 151 HOH HOH . P 8 HOH A 51 351 58 HOH HOH . P 8 HOH A 52 352 144 HOH HOH . P 8 HOH A 53 353 141 HOH HOH . P 8 HOH A 54 354 44 HOH HOH . P 8 HOH A 55 355 147 HOH HOH . P 8 HOH A 56 356 28 HOH HOH . P 8 HOH A 57 357 80 HOH HOH . P 8 HOH A 58 358 6 HOH HOH . P 8 HOH A 59 359 30 HOH HOH . P 8 HOH A 60 360 50 HOH HOH . P 8 HOH A 61 361 38 HOH HOH . P 8 HOH A 62 362 27 HOH HOH . P 8 HOH A 63 363 14 HOH HOH . P 8 HOH A 64 364 79 HOH HOH . P 8 HOH A 65 365 9 HOH HOH . P 8 HOH A 66 366 53 HOH HOH . P 8 HOH A 67 367 24 HOH HOH . P 8 HOH A 68 368 111 HOH HOH . P 8 HOH A 69 369 66 HOH HOH . P 8 HOH A 70 370 39 HOH HOH . P 8 HOH A 71 371 68 HOH HOH . P 8 HOH A 72 372 45 HOH HOH . P 8 HOH A 73 373 91 HOH HOH . P 8 HOH A 74 374 148 HOH HOH . P 8 HOH A 75 375 42 HOH HOH . P 8 HOH A 76 376 26 HOH HOH . P 8 HOH A 77 377 96 HOH HOH . P 8 HOH A 78 378 35 HOH HOH . P 8 HOH A 79 379 16 HOH HOH . P 8 HOH A 80 380 75 HOH HOH . P 8 HOH A 81 381 117 HOH HOH . P 8 HOH A 82 382 41 HOH HOH . P 8 HOH A 83 383 21 HOH HOH . P 8 HOH A 84 384 17 HOH HOH . P 8 HOH A 85 385 15 HOH HOH . P 8 HOH A 86 386 7 HOH HOH . P 8 HOH A 87 387 47 HOH HOH . P 8 HOH A 88 388 8 HOH HOH . P 8 HOH A 89 389 140 HOH HOH . P 8 HOH A 90 390 129 HOH HOH . P 8 HOH A 91 391 48 HOH HOH . P 8 HOH A 92 392 127 HOH HOH . P 8 HOH A 93 393 132 HOH HOH . P 8 HOH A 94 394 3 HOH HOH . P 8 HOH A 95 395 56 HOH HOH . P 8 HOH A 96 396 142 HOH HOH . P 8 HOH A 97 397 36 HOH HOH . P 8 HOH A 98 398 149 HOH HOH . P 8 HOH A 99 399 4 HOH HOH . P 8 HOH A 100 400 120 HOH HOH . P 8 HOH A 101 401 125 HOH HOH . P 8 HOH A 102 402 115 HOH HOH . P 8 HOH A 103 403 32 HOH HOH . P 8 HOH A 104 404 67 HOH HOH . P 8 HOH A 105 405 94 HOH HOH . P 8 HOH A 106 406 70 HOH HOH . P 8 HOH A 107 407 109 HOH HOH . P 8 HOH A 108 408 100 HOH HOH . P 8 HOH A 109 409 71 HOH HOH . P 8 HOH A 110 410 62 HOH HOH . P 8 HOH A 111 411 128 HOH HOH . P 8 HOH A 112 412 131 HOH HOH . P 8 HOH A 113 413 110 HOH HOH . P 8 HOH A 114 414 72 HOH HOH . P 8 HOH A 115 415 118 HOH HOH . P 8 HOH A 116 416 154 HOH HOH . P 8 HOH A 117 417 122 HOH HOH . P 8 HOH A 118 418 22 HOH HOH . P 8 HOH A 119 419 73 HOH HOH . P 8 HOH A 120 420 95 HOH HOH . P 8 HOH A 121 421 124 HOH HOH . P 8 HOH A 122 422 23 HOH HOH . P 8 HOH A 123 423 59 HOH HOH . P 8 HOH A 124 424 76 HOH HOH . P 8 HOH A 125 425 103 HOH HOH . P 8 HOH A 126 426 60 HOH HOH . P 8 HOH A 127 427 112 HOH HOH . P 8 HOH A 128 428 101 HOH HOH . P 8 HOH A 129 429 156 HOH HOH . P 8 HOH A 130 430 89 HOH HOH . P 8 HOH A 131 431 126 HOH HOH . P 8 HOH A 132 432 121 HOH HOH . P 8 HOH A 133 433 146 HOH HOH . P 8 HOH A 134 434 98 HOH HOH . P 8 HOH A 135 435 134 HOH HOH . P 8 HOH A 136 436 97 HOH HOH . P 8 HOH A 137 437 152 HOH HOH . P 8 HOH A 138 438 57 HOH HOH . P 8 HOH A 139 439 137 HOH HOH . P 8 HOH A 140 440 138 HOH HOH . P 8 HOH A 141 441 74 HOH HOH . P 8 HOH A 142 442 139 HOH HOH . P 8 HOH A 143 443 29 HOH HOH . P 8 HOH A 144 444 106 HOH HOH . P 8 HOH A 145 445 153 HOH HOH . P 8 HOH A 146 446 155 HOH HOH . P 8 HOH A 147 447 104 HOH HOH . P 8 HOH A 148 448 51 HOH HOH . P 8 HOH A 149 449 87 HOH HOH . P 8 HOH A 150 450 107 HOH HOH . P 8 HOH A 151 451 77 HOH HOH . P 8 HOH A 152 452 119 HOH HOH . P 8 HOH A 153 453 55 HOH HOH . P 8 HOH A 154 454 40 HOH HOH . P 8 HOH A 155 455 108 HOH HOH . P 8 HOH A 156 456 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 PHN . . . B 2 9.252 23.102 19.711 0.75 26.67 ? N1 PHN 201 A 1 HETATM 2 C C2 PHN . . . B 2 8.572 22.349 18.848 0.75 23.54 ? C2 PHN 201 A 1 HETATM 3 C C3 PHN . . . B 2 8.001 22.954 17.765 0.75 24.48 ? C3 PHN 201 A 1 HETATM 4 C C4 PHN . . . B 2 8.191 24.292 17.485 0.75 23.9 ? C4 PHN 201 A 1 HETATM 5 C C4A PHN . . . B 2 8.963 25.013 18.379 0.75 24.84 ? C4A PHN 201 A 1 HETATM 6 C C5 PHN . . . B 2 9.235 26.38 18.138 0.75 24.78 ? C5 PHN 201 A 1 HETATM 7 C C6 PHN . . . B 2 10.01 27.174 18.939 0.75 23.7 ? C6 PHN 201 A 1 HETATM 8 C C6A PHN . . . B 2 10.58 26.662 20.094 0.75 26.27 ? C6A PHN 201 A 1 HETATM 9 C C7 PHN . . . B 2 11.379 27.453 20.928 0.75 28.37 ? C7 PHN 201 A 1 HETATM 10 C C8 PHN . . . B 2 11.952 26.857 22.032 0.75 29.9 ? C8 PHN 201 A 1 HETATM 11 C C9 PHN . . . B 2 11.721 25.493 22.313 0.75 28.7 ? C9 PHN 201 A 1 HETATM 12 N N10 PHN . . . B 2 10.953 24.715 21.546 0.75 27.6 ? N10 PHN 201 A 1 HETATM 13 C C10 PHN . . . B 2 10.378 25.224 20.45 0.75 26.34 ? C10 PHN 201 A 1 HETATM 14 C C1A PHN . . . B 2 9.528 24.385 19.59 0.75 25.66 ? C1A PHN 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 14 #