data_7Q2B # _model_server_result.job_id vZYLdO25q22lllhBS6VUUw _model_server_result.datetime_utc '2024-11-30 00:28:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q2b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7Q2B # _exptl.entry_id 7Q2B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 162.232 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(phenylmethyl)imidazolidine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7Q2B _cell.length_a 57.289 _cell.length_b 57.289 _cell.length_c 205.992 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q2B _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H14 N2' _chem_comp.formula_weight 162.232 _chem_comp.id M6H _chem_comp.mon_nstd_flag . _chem_comp.name 2-(phenylmethyl)imidazolidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAI CAF M6H sing 227 n n NAI CAK M6H sing 228 n n CAD CAB M6H doub 229 n y CAD CAL M6H sing 230 n y CAH CAK M6H sing 231 n n CAH CAL M6H sing 232 n n CAB CAA M6H sing 233 n y CAF CAG M6H sing 234 n n CAK NAJ M6H sing 235 n n CAL CAE M6H doub 236 n y CAA CAC M6H doub 237 n y CAE CAC M6H sing 238 n y CAG NAJ M6H sing 239 n n CAA H1 M6H sing 240 n n CAB H2 M6H sing 241 n n CAC H3 M6H sing 242 n n CAD H4 M6H sing 243 n n CAE H5 M6H sing 244 n n CAF H6 M6H sing 245 n n CAF H7 M6H sing 246 n n CAG H8 M6H sing 247 n n CAG H9 M6H sing 248 n n CAH H10 M6H sing 249 n n CAH H11 M6H sing 250 n n CAK H12 M6H sing 251 n n NAI H13 M6H sing 252 n n NAJ H15 M6H sing 253 n n # _atom_sites.entry_id 7Q2B _atom_sites.fract_transf_matrix[1][1] 0.017455 _atom_sites.fract_transf_matrix[1][2] 0.010078 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004855 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 M6H A 1 401 1 M6H 218 . C 3 DMS A 1 402 1 DMS DMS . D 3 DMS A 1 403 2 DMS DMS . E 3 DMS A 1 404 3 DMS DMS . F 4 MG A 1 405 1 MG MG . G 4 MG A 1 406 2 MG MG . H 5 HOH A 1 501 88 HOH HOH . H 5 HOH A 2 502 139 HOH HOH . H 5 HOH A 3 503 111 HOH HOH . H 5 HOH A 4 504 162 HOH HOH . H 5 HOH A 5 505 2 HOH HOH . H 5 HOH A 6 506 60 HOH HOH . H 5 HOH A 7 507 32 HOH HOH . H 5 HOH A 8 508 70 HOH HOH . H 5 HOH A 9 509 175 HOH HOH . H 5 HOH A 10 510 169 HOH HOH . H 5 HOH A 11 511 173 HOH HOH . H 5 HOH A 12 512 97 HOH HOH . H 5 HOH A 13 513 43 HOH HOH . H 5 HOH A 14 514 156 HOH HOH . H 5 HOH A 15 515 58 HOH HOH . H 5 HOH A 16 516 150 HOH HOH . H 5 HOH A 17 517 8 HOH HOH . H 5 HOH A 18 518 163 HOH HOH . H 5 HOH A 19 519 164 HOH HOH . H 5 HOH A 20 520 48 HOH HOH . H 5 HOH A 21 521 79 HOH HOH . H 5 HOH A 22 522 112 HOH HOH . H 5 HOH A 23 523 109 HOH HOH . H 5 HOH A 24 524 118 HOH HOH . H 5 HOH A 25 525 132 HOH HOH . H 5 HOH A 26 526 101 HOH HOH . H 5 HOH A 27 527 7 HOH HOH . H 5 HOH A 28 528 47 HOH HOH . H 5 HOH A 29 529 179 HOH HOH . H 5 HOH A 30 530 135 HOH HOH . H 5 HOH A 31 531 45 HOH HOH . H 5 HOH A 32 532 134 HOH HOH . H 5 HOH A 33 533 131 HOH HOH . H 5 HOH A 34 534 177 HOH HOH . H 5 HOH A 35 535 94 HOH HOH . H 5 HOH A 36 536 68 HOH HOH . H 5 HOH A 37 537 166 HOH HOH . H 5 HOH A 38 538 100 HOH HOH . H 5 HOH A 39 539 146 HOH HOH . H 5 HOH A 40 540 83 HOH HOH . H 5 HOH A 41 541 50 HOH HOH . H 5 HOH A 42 542 44 HOH HOH . H 5 HOH A 43 543 4 HOH HOH . H 5 HOH A 44 544 113 HOH HOH . H 5 HOH A 45 545 117 HOH HOH . H 5 HOH A 46 546 161 HOH HOH . H 5 HOH A 47 547 13 HOH HOH . H 5 HOH A 48 548 55 HOH HOH . H 5 HOH A 49 549 110 HOH HOH . H 5 HOH A 50 550 180 HOH HOH . H 5 HOH A 51 551 66 HOH HOH . H 5 HOH A 52 552 99 HOH HOH . H 5 HOH A 53 553 34 HOH HOH . H 5 HOH A 54 554 1 HOH HOH . H 5 HOH A 55 555 42 HOH HOH . H 5 HOH A 56 556 98 HOH HOH . H 5 HOH A 57 557 102 HOH HOH . H 5 HOH A 58 558 16 HOH HOH . H 5 HOH A 59 559 9 HOH HOH . H 5 HOH A 60 560 41 HOH HOH . H 5 HOH A 61 561 15 HOH HOH . H 5 HOH A 62 562 69 HOH HOH . H 5 HOH A 63 563 93 HOH HOH . H 5 HOH A 64 564 95 HOH HOH . H 5 HOH A 65 565 65 HOH HOH . H 5 HOH A 66 566 59 HOH HOH . H 5 HOH A 67 567 89 HOH HOH . H 5 HOH A 68 568 67 HOH HOH . H 5 HOH A 69 569 31 HOH HOH . H 5 HOH A 70 570 19 HOH HOH . H 5 HOH A 71 571 105 HOH HOH . H 5 HOH A 72 572 12 HOH HOH . H 5 HOH A 73 573 51 HOH HOH . H 5 HOH A 74 574 5 HOH HOH . H 5 HOH A 75 575 39 HOH HOH . H 5 HOH A 76 576 81 HOH HOH . H 5 HOH A 77 577 147 HOH HOH . H 5 HOH A 78 578 6 HOH HOH . H 5 HOH A 79 579 53 HOH HOH . H 5 HOH A 80 580 28 HOH HOH . H 5 HOH A 81 581 178 HOH HOH . H 5 HOH A 82 582 24 HOH HOH . H 5 HOH A 83 583 126 HOH HOH . H 5 HOH A 84 584 141 HOH HOH . H 5 HOH A 85 585 18 HOH HOH . H 5 HOH A 86 586 91 HOH HOH . H 5 HOH A 87 587 30 HOH HOH . H 5 HOH A 88 588 73 HOH HOH . H 5 HOH A 89 589 33 HOH HOH . H 5 HOH A 90 590 75 HOH HOH . H 5 HOH A 91 591 167 HOH HOH . H 5 HOH A 92 592 14 HOH HOH . H 5 HOH A 93 593 125 HOH HOH . H 5 HOH A 94 594 151 HOH HOH . H 5 HOH A 95 595 172 HOH HOH . H 5 HOH A 96 596 54 HOH HOH . H 5 HOH A 97 597 145 HOH HOH . H 5 HOH A 98 598 71 HOH HOH . H 5 HOH A 99 599 130 HOH HOH . H 5 HOH A 100 600 74 HOH HOH . H 5 HOH A 101 601 46 HOH HOH . H 5 HOH A 102 602 103 HOH HOH . H 5 HOH A 103 603 3 HOH HOH . H 5 HOH A 104 604 87 HOH HOH . H 5 HOH A 105 605 138 HOH HOH . H 5 HOH A 106 606 168 HOH HOH . H 5 HOH A 107 607 17 HOH HOH . H 5 HOH A 108 608 114 HOH HOH . H 5 HOH A 109 609 10 HOH HOH . H 5 HOH A 110 610 26 HOH HOH . H 5 HOH A 111 611 142 HOH HOH . H 5 HOH A 112 612 152 HOH HOH . H 5 HOH A 113 613 160 HOH HOH . H 5 HOH A 114 614 149 HOH HOH . H 5 HOH A 115 615 176 HOH HOH . H 5 HOH A 116 616 20 HOH HOH . H 5 HOH A 117 617 35 HOH HOH . H 5 HOH A 118 618 158 HOH HOH . H 5 HOH A 119 619 57 HOH HOH . H 5 HOH A 120 620 21 HOH HOH . H 5 HOH A 121 621 36 HOH HOH . H 5 HOH A 122 622 107 HOH HOH . H 5 HOH A 123 623 29 HOH HOH . H 5 HOH A 124 624 155 HOH HOH . H 5 HOH A 125 625 27 HOH HOH . H 5 HOH A 126 626 25 HOH HOH . H 5 HOH A 127 627 148 HOH HOH . H 5 HOH A 128 628 61 HOH HOH . H 5 HOH A 129 629 90 HOH HOH . H 5 HOH A 130 630 77 HOH HOH . H 5 HOH A 131 631 120 HOH HOH . H 5 HOH A 132 632 80 HOH HOH . H 5 HOH A 133 633 143 HOH HOH . H 5 HOH A 134 634 124 HOH HOH . H 5 HOH A 135 635 128 HOH HOH . H 5 HOH A 136 636 84 HOH HOH . H 5 HOH A 137 637 165 HOH HOH . H 5 HOH A 138 638 137 HOH HOH . H 5 HOH A 139 639 82 HOH HOH . H 5 HOH A 140 640 121 HOH HOH . H 5 HOH A 141 641 49 HOH HOH . H 5 HOH A 142 642 104 HOH HOH . H 5 HOH A 143 643 119 HOH HOH . H 5 HOH A 144 644 116 HOH HOH . H 5 HOH A 145 645 37 HOH HOH . H 5 HOH A 146 646 122 HOH HOH . H 5 HOH A 147 647 144 HOH HOH . H 5 HOH A 148 648 106 HOH HOH . H 5 HOH A 149 649 85 HOH HOH . H 5 HOH A 150 650 115 HOH HOH . H 5 HOH A 151 651 159 HOH HOH . H 5 HOH A 152 652 64 HOH HOH . H 5 HOH A 153 653 86 HOH HOH . H 5 HOH A 154 654 153 HOH HOH . H 5 HOH A 155 655 40 HOH HOH . H 5 HOH A 156 656 96 HOH HOH . H 5 HOH A 157 657 170 HOH HOH . H 5 HOH A 158 658 174 HOH HOH . H 5 HOH A 159 659 127 HOH HOH . H 5 HOH A 160 660 171 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA M6H . . . B 2 -32.827 -11.327 10.992 1 41.75 ? CAA M6H 401 A 1 HETATM 2 C CAB M6H . . . B 2 -31.455 -11.316 10.799 1 47.18 ? CAB M6H 401 A 1 HETATM 3 C CAC M6H . . . B 2 -33.361 -11.247 12.264 1 40.84 ? CAC M6H 401 A 1 HETATM 4 C CAD M6H . . . B 2 -30.604 -11.217 11.892 1 40.02 ? CAD M6H 401 A 1 HETATM 5 C CAE M6H . . . B 2 -32.516 -11.151 13.351 1 48.31 ? CAE M6H 401 A 1 HETATM 6 C CAF M6H . . . B 2 -27.455 -13.323 14.174 1 46.72 ? CAF M6H 401 A 1 HETATM 7 C CAG M6H . . . B 2 -28.082 -13.722 15.35 1 52.47 ? CAG M6H 401 A 1 HETATM 8 C CAH M6H . . . B 2 -30.242 -10.997 14.395 1 40.91 ? CAH M6H 401 A 1 HETATM 9 C CAK M6H . . . B 2 -29.171 -12.08 14.525 1 41.81 ? CAK M6H 401 A 1 HETATM 10 C CAL M6H . . . B 2 -31.137 -11.143 13.169 1 39.91 ? CAL M6H 401 A 1 HETATM 11 N NAI M6H . . . B 2 -28.156 -12.304 13.704 1 46.34 ? NAI M6H 401 A 1 HETATM 12 N NAJ M6H . . . B 2 -29.126 -12.929 15.538 1 50.74 ? NAJ M6H 401 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #