data_7Q2N # _model_server_result.job_id oU9-9ZVX6-vU2MXMLRyRuA _model_server_result.datetime_utc '2024-10-20 22:39:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q2n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 7Q2N # _exptl.entry_id 7Q2N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Q2N _cell.length_a 55.821 _cell.length_b 73.34 _cell.length_c 179.701 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q2N _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 AAA CYS 66 1_555 A SG CYS 160 AAA CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? disulf ? disulf2 A SG CYS 106 AAA CYS 106 1_555 A SG CYS 119 AAA CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? disulf ? disulf3 B SG CYS 66 BBB CYS 66 1_555 B SG CYS 160 BBB CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf4 B SG CYS 106 BBB CYS 106 1_555 B SG CYS 119 BBB CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 182 n n C1 C2 GOL sing 183 n n C1 H11 GOL sing 184 n n C1 H12 GOL sing 185 n n O1 HO1 GOL sing 186 n n C2 O2 GOL sing 187 n n C2 C3 GOL sing 188 n n C2 H2 GOL sing 189 n n O2 HO2 GOL sing 190 n n C3 O3 GOL sing 191 n n C3 H31 GOL sing 192 n n C3 H32 GOL sing 193 n n O3 HO3 GOL sing 194 n n # _atom_sites.entry_id 7Q2N _atom_sites.fract_transf_matrix[1][1] 0.017914 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005565 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DSM AAA 1 201 201 DSM DSM . D 2 DSM AAA 1 202 301 DSM DSM . E 3 GOL AAA 1 203 163 GOL GOL . F 2 DSM AAA 1 204 164 DSM DSM . G 4 CL AAA 1 205 166 CL CL . H 5 EDO AAA 1 206 167 EDO EDO . I 6 SO4 AAA 1 207 1 SO4 SO4 . J 2 DSM BBB 1 201 165 DSM DSM . K 6 SO4 BBB 1 202 2 SO4 SO4 . L 7 HOH AAA 1 301 199 HOH HOH . L 7 HOH AAA 2 302 202 HOH HOH . L 7 HOH AAA 3 303 217 HOH HOH . L 7 HOH AAA 4 304 200 HOH HOH . L 7 HOH AAA 5 305 185 HOH HOH . L 7 HOH AAA 6 306 214 HOH HOH . L 7 HOH AAA 7 307 203 HOH HOH . L 7 HOH AAA 8 308 191 HOH HOH . L 7 HOH AAA 9 309 230 HOH HOH . L 7 HOH AAA 10 310 174 HOH HOH . L 7 HOH AAA 11 311 20 HOH HOH . L 7 HOH AAA 12 312 224 HOH HOH . L 7 HOH AAA 13 313 233 HOH HOH . L 7 HOH AAA 14 314 177 HOH HOH . L 7 HOH AAA 15 315 180 HOH HOH . L 7 HOH AAA 16 316 193 HOH HOH . L 7 HOH AAA 17 317 25 HOH HOH . L 7 HOH AAA 18 318 188 HOH HOH . L 7 HOH AAA 19 319 175 HOH HOH . L 7 HOH AAA 20 320 212 HOH HOH . L 7 HOH AAA 21 321 196 HOH HOH . L 7 HOH AAA 22 322 184 HOH HOH . L 7 HOH AAA 23 323 189 HOH HOH . L 7 HOH AAA 24 324 222 HOH HOH . L 7 HOH AAA 25 325 179 HOH HOH . L 7 HOH AAA 26 326 198 HOH HOH . L 7 HOH AAA 27 327 181 HOH HOH . L 7 HOH AAA 28 328 242 HOH HOH . L 7 HOH AAA 29 329 176 HOH HOH . L 7 HOH AAA 30 330 192 HOH HOH . L 7 HOH AAA 31 331 235 HOH HOH . L 7 HOH AAA 32 332 186 HOH HOH . L 7 HOH AAA 33 333 182 HOH HOH . L 7 HOH AAA 34 334 197 HOH HOH . L 7 HOH AAA 35 335 187 HOH HOH . L 7 HOH AAA 36 336 178 HOH HOH . L 7 HOH AAA 37 337 7 HOH HOH . L 7 HOH AAA 38 338 190 HOH HOH . L 7 HOH AAA 39 339 210 HOH HOH . L 7 HOH AAA 40 340 205 HOH HOH . L 7 HOH AAA 41 341 172 HOH HOH . L 7 HOH AAA 42 342 204 HOH HOH . L 7 HOH AAA 43 343 208 HOH HOH . L 7 HOH AAA 44 344 16 HOH HOH . L 7 HOH AAA 45 345 211 HOH HOH . L 7 HOH AAA 46 346 195 HOH HOH . L 7 HOH AAA 47 347 236 HOH HOH . L 7 HOH AAA 48 348 221 HOH HOH . L 7 HOH AAA 49 349 215 HOH HOH . L 7 HOH AAA 50 350 237 HOH HOH . L 7 HOH AAA 51 351 201 HOH HOH . L 7 HOH AAA 52 352 207 HOH HOH . L 7 HOH AAA 53 353 226 HOH HOH . L 7 HOH AAA 54 354 231 HOH HOH . L 7 HOH AAA 55 355 260 HOH HOH . L 7 HOH AAA 56 356 170 HOH HOH . L 7 HOH AAA 57 357 41 HOH HOH . L 7 HOH AAA 58 358 250 HOH HOH . L 7 HOH AAA 59 359 206 HOH HOH . L 7 HOH AAA 60 360 213 HOH HOH . L 7 HOH AAA 61 361 248 HOH HOH . L 7 HOH AAA 62 362 205 HOH HOH . L 7 HOH AAA 63 363 241 HOH HOH . L 7 HOH AAA 64 364 246 HOH HOH . L 7 HOH AAA 65 365 17 HOH HOH . L 7 HOH AAA 66 366 216 HOH HOH . L 7 HOH AAA 67 367 232 HOH HOH . L 7 HOH AAA 68 368 229 HOH HOH . L 7 HOH AAA 69 369 256 HOH HOH . L 7 HOH AAA 70 370 244 HOH HOH . L 7 HOH AAA 71 371 220 HOH HOH . M 7 HOH BBB 1 301 174 HOH HOH . M 7 HOH BBB 2 302 185 HOH HOH . M 7 HOH BBB 3 303 200 HOH HOH . M 7 HOH BBB 4 304 214 HOH HOH . M 7 HOH BBB 5 305 233 HOH HOH . M 7 HOH BBB 6 306 188 HOH HOH . M 7 HOH BBB 7 307 248 HOH HOH . M 7 HOH BBB 8 308 192 HOH HOH . M 7 HOH BBB 9 309 197 HOH HOH . M 7 HOH BBB 10 310 207 HOH HOH . M 7 HOH BBB 11 311 170 HOH HOH . M 7 HOH BBB 12 312 171 HOH HOH . M 7 HOH BBB 13 313 173 HOH HOH . M 7 HOH BBB 14 314 247 HOH HOH . M 7 HOH BBB 15 315 193 HOH HOH . M 7 HOH BBB 16 316 224 HOH HOH . M 7 HOH BBB 17 317 184 HOH HOH . M 7 HOH BBB 18 318 182 HOH HOH . M 7 HOH BBB 19 319 167 HOH HOH . M 7 HOH BBB 20 320 206 HOH HOH . M 7 HOH BBB 21 321 195 HOH HOH . M 7 HOH BBB 22 322 178 HOH HOH . M 7 HOH BBB 23 323 166 HOH HOH . M 7 HOH BBB 24 324 218 HOH HOH . M 7 HOH BBB 25 325 209 HOH HOH . M 7 HOH BBB 26 326 172 HOH HOH . M 7 HOH BBB 27 327 202 HOH HOH . M 7 HOH BBB 28 328 175 HOH HOH . M 7 HOH BBB 29 329 229 HOH HOH . M 7 HOH BBB 30 330 241 HOH HOH . M 7 HOH BBB 31 331 29 HOH HOH . M 7 HOH BBB 32 332 177 HOH HOH . M 7 HOH BBB 33 333 38 HOH HOH . M 7 HOH BBB 34 334 168 HOH HOH . M 7 HOH BBB 35 335 204 HOH HOH . M 7 HOH BBB 36 336 176 HOH HOH . M 7 HOH BBB 37 337 165 HOH HOH . M 7 HOH BBB 38 338 2 HOH HOH . M 7 HOH BBB 39 339 187 HOH HOH . M 7 HOH BBB 40 340 179 HOH HOH . M 7 HOH BBB 41 341 18 HOH HOH . M 7 HOH BBB 42 342 186 HOH HOH . M 7 HOH BBB 43 343 220 HOH HOH . M 7 HOH BBB 44 344 183 HOH HOH . M 7 HOH BBB 45 345 198 HOH HOH . M 7 HOH BBB 46 346 189 HOH HOH . M 7 HOH BBB 47 347 201 HOH HOH . M 7 HOH BBB 48 348 180 HOH HOH . M 7 HOH BBB 49 349 37 HOH HOH . M 7 HOH BBB 50 350 211 HOH HOH . M 7 HOH BBB 51 351 226 HOH HOH . M 7 HOH BBB 52 352 234 HOH HOH . M 7 HOH BBB 53 353 169 HOH HOH . M 7 HOH BBB 54 354 221 HOH HOH . M 7 HOH BBB 55 355 22 HOH HOH . M 7 HOH BBB 56 356 213 HOH HOH . M 7 HOH BBB 57 357 190 HOH HOH . M 7 HOH BBB 58 358 238 HOH HOH . M 7 HOH BBB 59 359 235 HOH HOH . M 7 HOH BBB 60 360 230 HOH HOH . M 7 HOH BBB 61 361 194 HOH HOH . M 7 HOH BBB 62 362 194 HOH HOH . M 7 HOH BBB 63 363 33 HOH HOH . M 7 HOH BBB 64 364 215 HOH HOH . M 7 HOH BBB 65 365 232 HOH HOH . M 7 HOH BBB 66 366 223 HOH HOH . M 7 HOH BBB 67 367 219 HOH HOH . M 7 HOH BBB 68 368 228 HOH HOH . M 7 HOH BBB 69 369 39 HOH HOH . M 7 HOH BBB 70 370 199 HOH HOH . M 7 HOH BBB 71 371 36 HOH HOH . M 7 HOH BBB 72 372 40 HOH HOH . M 7 HOH BBB 73 373 236 HOH HOH . M 7 HOH BBB 74 374 225 HOH HOH . M 7 HOH BBB 75 375 227 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 18.871 -13.531 54.443 1 80.23 0 C1 GOL 203 AAA 1 HETATM 2 O O1 GOL . . . E 3 19.945 -12.648 54.773 1 78.71 0 O1 GOL 203 AAA 1 HETATM 3 C C2 GOL . . . E 3 17.935 -12.963 53.389 1 79.33 0 C2 GOL 203 AAA 1 HETATM 4 O O2 GOL . . . E 3 18.634 -12.101 52.494 1 76.78 0 O2 GOL 203 AAA 1 HETATM 5 C C3 GOL . . . E 3 17.231 -14.031 52.573 1 81.62 0 C3 GOL 203 AAA 1 HETATM 6 O O3 GOL . . . E 3 16.199 -13.481 51.753 1 80.04 0 O3 GOL 203 AAA 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #