data_7Q2O
#
_model_server_result.job_id            XyozIJmEorpETR7XiZW8Qg 
_model_server_result.datetime_utc      '2024-10-20 01:30:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7q2o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":205}' 
#
_entry.id    7Q2O 
#
_exptl.entry_id    7Q2O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              266.381 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3-(10,11-DIHYDRO-5H-DIBENZO[B,F]AZEPIN-5-YL)-N-METHYLPROPAN-1-AMINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7Q2O 
_cell.length_a            55.667 
_cell.length_b            70.145 
_cell.length_c            179.018 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Q2O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        24 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 G N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 66 AAA CYS 66 1_555 A SG CYS 160 AAA CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf2 A SG CYS 106 AAA CYS 106 1_555 A SG CYS 119 AAA CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf3 B SG CYS 66 BBB CYS 66 1_555 B SG CYS 160 BBB CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf4 B SG CYS 106 BBB CYS 106 1_555 B SG CYS 119 BBB CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
#
_chem_comp.formula           'C18 H22 N2' 
_chem_comp.formula_weight    266.381 
_chem_comp.id                DSM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3-(10,11-DIHYDRO-5H-DIBENZO[B,F]AZEPIN-5-YL)-N-METHYLPROPAN-1-AMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Desipramine;Norpramin 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 N2 DSM sing 83 n n 
C18 H181 DSM sing 84 n n 
C18 H182 DSM sing 85 n n 
C18 H183 DSM sing 86 n n 
N2 C17 DSM sing 87 n n 
N2 HN2 DSM sing 88 n n 
C17 C16 DSM sing 89 n n 
C17 H171 DSM sing 90 n n 
C17 H172 DSM sing 91 n n 
C16 C15 DSM sing 92 n n 
C16 H161 DSM sing 93 n n 
C16 H162 DSM sing 94 n n 
C15 N1 DSM sing 95 n n 
C15 H151 DSM sing 96 n n 
C15 H152 DSM sing 97 n n 
N1 C11 DSM sing 98 n n 
N1 C14 DSM sing 99 n n 
C14 C1 DSM sing 100 n y 
C14 C13 DSM doub 101 n y 
C1 C2 DSM doub 102 n y 
C1 H1 DSM sing 103 n n 
C2 C3 DSM sing 104 n y 
C2 H2 DSM sing 105 n n 
C3 C4 DSM doub 106 n y 
C3 H3 DSM sing 107 n n 
C4 C13 DSM sing 108 n y 
C4 H4 DSM sing 109 n n 
C13 C5 DSM sing 110 n n 
C5 C6 DSM sing 111 n n 
C5 H51 DSM sing 112 n n 
C5 H52 DSM sing 113 n n 
C6 C12 DSM sing 114 n n 
C6 H61 DSM sing 115 n n 
C6 H62 DSM sing 116 n n 
C12 C11 DSM doub 117 n y 
C12 C7 DSM sing 118 n y 
C11 C10 DSM sing 119 n y 
C7 C8 DSM doub 120 n y 
C7 H7 DSM sing 121 n n 
C8 C9 DSM sing 122 n y 
C8 H8 DSM sing 123 n n 
C9 C10 DSM doub 124 n y 
C9 H9 DSM sing 125 n n 
C10 H10 DSM sing 126 n n 
#
_atom_sites.entry_id                     7Q2O 
_atom_sites.fract_transf_matrix[1][1]    0.017964 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014256 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005586 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 AAA 1 201 163 SO4 SO4 . 
D 3 DSM AAA 1 202 165 DSM DSM . 
E 3 DSM AAA 1 203 166 DSM DSM . 
F 4 CL AAA 1 204 168 CL CL . 
G 3 DSM AAA 1 205 701 DSM DSM . 
H 5 EDO AAA 1 206 801 EDO EDO . 
I 5 EDO BBB 1 301 301 EDO EDO . 
J 3 DSM BBB 1 302 401 DSM DSM . 
K 6 HOH AAA 1 301 858 HOH HOH . 
K 6 HOH AAA 2 302 9 HOH HOH . 
K 6 HOH AAA 3 303 809 HOH HOH . 
K 6 HOH AAA 4 304 845 HOH HOH . 
K 6 HOH AAA 5 305 831 HOH HOH . 
K 6 HOH AAA 6 306 867 HOH HOH . 
K 6 HOH AAA 7 307 825 HOH HOH . 
K 6 HOH AAA 8 308 815 HOH HOH . 
K 6 HOH AAA 9 309 848 HOH HOH . 
K 6 HOH AAA 10 310 899 HOH HOH . 
K 6 HOH AAA 11 311 842 HOH HOH . 
K 6 HOH AAA 12 312 869 HOH HOH . 
K 6 HOH AAA 13 313 886 HOH HOH . 
K 6 HOH AAA 14 314 843 HOH HOH . 
K 6 HOH AAA 15 315 849 HOH HOH . 
K 6 HOH AAA 16 316 884 HOH HOH . 
K 6 HOH AAA 17 317 803 HOH HOH . 
K 6 HOH AAA 18 318 860 HOH HOH . 
K 6 HOH AAA 19 319 821 HOH HOH . 
K 6 HOH AAA 20 320 841 HOH HOH . 
K 6 HOH AAA 21 321 836 HOH HOH . 
K 6 HOH AAA 22 322 805 HOH HOH . 
K 6 HOH AAA 23 323 802 HOH HOH . 
K 6 HOH AAA 24 324 808 HOH HOH . 
K 6 HOH AAA 25 325 813 HOH HOH . 
K 6 HOH AAA 26 326 844 HOH HOH . 
K 6 HOH AAA 27 327 818 HOH HOH . 
K 6 HOH AAA 28 328 851 HOH HOH . 
K 6 HOH AAA 29 329 823 HOH HOH . 
K 6 HOH AAA 30 330 804 HOH HOH . 
K 6 HOH AAA 31 331 807 HOH HOH . 
K 6 HOH AAA 32 332 812 HOH HOH . 
K 6 HOH AAA 33 333 876 HOH HOH . 
K 6 HOH AAA 34 334 811 HOH HOH . 
K 6 HOH AAA 35 335 828 HOH HOH . 
K 6 HOH AAA 36 336 833 HOH HOH . 
K 6 HOH AAA 37 337 832 HOH HOH . 
K 6 HOH AAA 38 338 837 HOH HOH . 
K 6 HOH AAA 39 339 879 HOH HOH . 
K 6 HOH AAA 40 340 863 HOH HOH . 
K 6 HOH AAA 41 341 2 HOH HOH . 
K 6 HOH AAA 42 342 914 HOH HOH . 
K 6 HOH AAA 43 343 852 HOH HOH . 
K 6 HOH AAA 44 344 820 HOH HOH . 
K 6 HOH AAA 45 345 904 HOH HOH . 
K 6 HOH AAA 46 346 810 HOH HOH . 
K 6 HOH AAA 47 347 819 HOH HOH . 
K 6 HOH AAA 48 348 854 HOH HOH . 
K 6 HOH AAA 49 349 856 HOH HOH . 
K 6 HOH AAA 50 350 916 HOH HOH . 
K 6 HOH AAA 51 351 839 HOH HOH . 
K 6 HOH AAA 52 352 824 HOH HOH . 
K 6 HOH AAA 53 353 817 HOH HOH . 
K 6 HOH AAA 54 354 912 HOH HOH . 
K 6 HOH AAA 55 355 859 HOH HOH . 
K 6 HOH AAA 56 356 830 HOH HOH . 
K 6 HOH AAA 57 357 829 HOH HOH . 
K 6 HOH AAA 58 358 838 HOH HOH . 
K 6 HOH AAA 59 359 814 HOH HOH . 
K 6 HOH AAA 60 360 877 HOH HOH . 
K 6 HOH AAA 61 361 902 HOH HOH . 
K 6 HOH AAA 62 362 901 HOH HOH . 
K 6 HOH AAA 63 363 897 HOH HOH . 
K 6 HOH AAA 64 364 826 HOH HOH . 
K 6 HOH AAA 65 365 806 HOH HOH . 
K 6 HOH AAA 66 366 857 HOH HOH . 
K 6 HOH AAA 67 367 846 HOH HOH . 
K 6 HOH AAA 68 368 822 HOH HOH . 
K 6 HOH AAA 69 369 871 HOH HOH . 
K 6 HOH AAA 70 370 850 HOH HOH . 
K 6 HOH AAA 71 371 834 HOH HOH . 
K 6 HOH AAA 72 372 872 HOH HOH . 
K 6 HOH AAA 73 373 907 HOH HOH . 
K 6 HOH AAA 74 374 893 HOH HOH . 
K 6 HOH AAA 75 375 885 HOH HOH . 
K 6 HOH AAA 76 376 3 HOH HOH . 
K 6 HOH AAA 77 377 898 HOH HOH . 
K 6 HOH AAA 78 378 880 HOH HOH . 
K 6 HOH AAA 79 379 896 HOH HOH . 
K 6 HOH AAA 80 380 572 HOH HOH . 
K 6 HOH AAA 81 381 881 HOH HOH . 
K 6 HOH AAA 82 382 868 HOH HOH . 
K 6 HOH AAA 83 383 878 HOH HOH . 
K 6 HOH AAA 84 384 910 HOH HOH . 
K 6 HOH AAA 85 385 862 HOH HOH . 
K 6 HOH AAA 86 386 840 HOH HOH . 
K 6 HOH AAA 87 387 530 HOH HOH . 
K 6 HOH AAA 88 388 888 HOH HOH . 
K 6 HOH AAA 89 389 889 HOH HOH . 
K 6 HOH AAA 90 390 827 HOH HOH . 
K 6 HOH AAA 91 391 909 HOH HOH . 
K 6 HOH AAA 92 392 866 HOH HOH . 
L 6 HOH BBB 1 401 583 HOH HOH . 
L 6 HOH BBB 2 402 523 HOH HOH . 
L 6 HOH BBB 3 403 577 HOH HOH . 
L 6 HOH BBB 4 404 546 HOH HOH . 
L 6 HOH BBB 5 405 525 HOH HOH . 
L 6 HOH BBB 6 406 503 HOH HOH . 
L 6 HOH BBB 7 407 564 HOH HOH . 
L 6 HOH BBB 8 408 519 HOH HOH . 
L 6 HOH BBB 9 409 540 HOH HOH . 
L 6 HOH BBB 10 410 522 HOH HOH . 
L 6 HOH BBB 11 411 7 HOH HOH . 
L 6 HOH BBB 12 412 508 HOH HOH . 
L 6 HOH BBB 13 413 514 HOH HOH . 
L 6 HOH BBB 14 414 517 HOH HOH . 
L 6 HOH BBB 15 415 594 HOH HOH . 
L 6 HOH BBB 16 416 511 HOH HOH . 
L 6 HOH BBB 17 417 510 HOH HOH . 
L 6 HOH BBB 18 418 545 HOH HOH . 
L 6 HOH BBB 19 419 504 HOH HOH . 
L 6 HOH BBB 20 420 506 HOH HOH . 
L 6 HOH BBB 21 421 524 HOH HOH . 
L 6 HOH BBB 22 422 516 HOH HOH . 
L 6 HOH BBB 23 423 507 HOH HOH . 
L 6 HOH BBB 24 424 529 HOH HOH . 
L 6 HOH BBB 25 425 532 HOH HOH . 
L 6 HOH BBB 26 426 578 HOH HOH . 
L 6 HOH BBB 27 427 555 HOH HOH . 
L 6 HOH BBB 28 428 518 HOH HOH . 
L 6 HOH BBB 29 429 535 HOH HOH . 
L 6 HOH BBB 30 430 559 HOH HOH . 
L 6 HOH BBB 31 431 512 HOH HOH . 
L 6 HOH BBB 32 432 527 HOH HOH . 
L 6 HOH BBB 33 433 538 HOH HOH . 
L 6 HOH BBB 34 434 502 HOH HOH . 
L 6 HOH BBB 35 435 509 HOH HOH . 
L 6 HOH BBB 36 436 515 HOH HOH . 
L 6 HOH BBB 37 437 563 HOH HOH . 
L 6 HOH BBB 38 438 543 HOH HOH . 
L 6 HOH BBB 39 439 552 HOH HOH . 
L 6 HOH BBB 40 440 541 HOH HOH . 
L 6 HOH BBB 41 441 547 HOH HOH . 
L 6 HOH BBB 42 442 513 HOH HOH . 
L 6 HOH BBB 43 443 505 HOH HOH . 
L 6 HOH BBB 44 444 560 HOH HOH . 
L 6 HOH BBB 45 445 557 HOH HOH . 
L 6 HOH BBB 46 446 534 HOH HOH . 
L 6 HOH BBB 47 447 567 HOH HOH . 
L 6 HOH BBB 48 448 593 HOH HOH . 
L 6 HOH BBB 49 449 11 HOH HOH . 
L 6 HOH BBB 50 450 537 HOH HOH . 
L 6 HOH BBB 51 451 553 HOH HOH . 
L 6 HOH BBB 52 452 12 HOH HOH . 
L 6 HOH BBB 53 453 569 HOH HOH . 
L 6 HOH BBB 54 454 542 HOH HOH . 
L 6 HOH BBB 55 455 551 HOH HOH . 
L 6 HOH BBB 56 456 528 HOH HOH . 
L 6 HOH BBB 57 457 568 HOH HOH . 
L 6 HOH BBB 58 458 892 HOH HOH . 
L 6 HOH BBB 59 459 13 HOH HOH . 
L 6 HOH BBB 60 460 544 HOH HOH . 
L 6 HOH BBB 61 461 5 HOH HOH . 
L 6 HOH BBB 62 462 531 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 DSM . . . G 3 23.538 11.174 50.38 0.8 65.81 0 C18 DSM 205 AAA 1 
HETATM 2 N N2 DSM . . . G 3 22.077 11.09 50.453 0.8 72.08 0 N2 DSM 205 AAA 1 
HETATM 3 C C17 DSM . . . G 3 21.585 10.017 51.322 0.8 94.41 0 C17 DSM 205 AAA 1 
HETATM 4 C C16 DSM . . . G 3 20.145 9.632 51.037 0.8 60.32 0 C16 DSM 205 AAA 1 
HETATM 5 C C15 DSM . . . G 3 19.109 10.336 51.889 0.8 82.38 0 C15 DSM 205 AAA 1 
HETATM 6 N N1 DSM . . . G 3 18.05 9.438 52.336 0.8 65.74 0 N1 DSM 205 AAA 1 
HETATM 7 C C14 DSM . . . G 3 17.236 9.836 53.436 0.8 48.81 0 C14 DSM 205 AAA 1 
HETATM 8 C C1 DSM . . . G 3 16.772 11.14 53.55 0.8 53.8 0 C1 DSM 205 AAA 1 
HETATM 9 C C2 DSM . . . G 3 16.02 11.488 54.657 0.8 53.92 0 C2 DSM 205 AAA 1 
HETATM 10 C C3 DSM . . . G 3 15.707 10.547 55.616 0.8 32.82 0 C3 DSM 205 AAA 1 
HETATM 11 C C4 DSM . . . G 3 16.118 9.237 55.469 0.8 47.52 0 C4 DSM 205 AAA 1 
HETATM 12 C C13 DSM . . . G 3 16.892 8.859 54.381 0.8 49.43 0 C13 DSM 205 AAA 1 
HETATM 13 C C5 DSM . . . G 3 17.353 7.423 54.306 0.8 51.44 0 C5 DSM 205 AAA 1 
HETATM 14 C C6 DSM . . . G 3 17.437 6.711 52.957 0.8 46.5 0 C6 DSM 205 AAA 1 
HETATM 15 C C12 DSM . . . G 3 16.925 7.419 51.721 0.8 70.19 0 C12 DSM 205 AAA 1 
HETATM 16 C C11 DSM . . . G 3 17.34 8.704 51.354 0.8 60.24 0 C11 DSM 205 AAA 1 
HETATM 17 C C7 DSM . . . G 3 16.011 6.772 50.896 0.8 95.84 0 C7 DSM 205 AAA 1 
HETATM 18 C C8 DSM . . . G 3 15.535 7.386 49.749 0.8 109.33 0 C8 DSM 205 AAA 1 
HETATM 19 C C9 DSM . . . G 3 15.991 8.639 49.382 0.8 82.02 0 C9 DSM 205 AAA 1 
HETATM 20 C C10 DSM . . . G 3 16.905 9.308 50.178 0.8 70.78 0 C10 DSM 205 AAA 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           20 
#