data_7Q2O # _model_server_result.job_id 5kqZOzAwNnMLOAUBAzO6mg _model_server_result.datetime_utc '2024-10-20 01:32:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q2o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":301}' # _entry.id 7Q2O # _exptl.entry_id 7Q2O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Q2O _cell.length_a 55.667 _cell.length_b 70.145 _cell.length_c 179.018 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q2O _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 AAA CYS 66 1_555 A SG CYS 160 AAA CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 A SG CYS 106 AAA CYS 106 1_555 A SG CYS 119 AAA CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 B SG CYS 66 BBB CYS 66 1_555 B SG CYS 160 BBB CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf4 B SG CYS 106 BBB CYS 106 1_555 B SG CYS 119 BBB CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 127 n n C1 C2 EDO sing 128 n n C1 H11 EDO sing 129 n n C1 H12 EDO sing 130 n n O1 HO1 EDO sing 131 n n C2 O2 EDO sing 132 n n C2 H21 EDO sing 133 n n C2 H22 EDO sing 134 n n O2 HO2 EDO sing 135 n n # _atom_sites.entry_id 7Q2O _atom_sites.fract_transf_matrix[1][1] 0.017964 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014256 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 AAA 1 201 163 SO4 SO4 . D 3 DSM AAA 1 202 165 DSM DSM . E 3 DSM AAA 1 203 166 DSM DSM . F 4 CL AAA 1 204 168 CL CL . G 3 DSM AAA 1 205 701 DSM DSM . H 5 EDO AAA 1 206 801 EDO EDO . I 5 EDO BBB 1 301 301 EDO EDO . J 3 DSM BBB 1 302 401 DSM DSM . K 6 HOH AAA 1 301 858 HOH HOH . K 6 HOH AAA 2 302 9 HOH HOH . K 6 HOH AAA 3 303 809 HOH HOH . K 6 HOH AAA 4 304 845 HOH HOH . K 6 HOH AAA 5 305 831 HOH HOH . K 6 HOH AAA 6 306 867 HOH HOH . K 6 HOH AAA 7 307 825 HOH HOH . K 6 HOH AAA 8 308 815 HOH HOH . K 6 HOH AAA 9 309 848 HOH HOH . K 6 HOH AAA 10 310 899 HOH HOH . K 6 HOH AAA 11 311 842 HOH HOH . K 6 HOH AAA 12 312 869 HOH HOH . K 6 HOH AAA 13 313 886 HOH HOH . K 6 HOH AAA 14 314 843 HOH HOH . K 6 HOH AAA 15 315 849 HOH HOH . K 6 HOH AAA 16 316 884 HOH HOH . K 6 HOH AAA 17 317 803 HOH HOH . K 6 HOH AAA 18 318 860 HOH HOH . K 6 HOH AAA 19 319 821 HOH HOH . K 6 HOH AAA 20 320 841 HOH HOH . K 6 HOH AAA 21 321 836 HOH HOH . K 6 HOH AAA 22 322 805 HOH HOH . K 6 HOH AAA 23 323 802 HOH HOH . K 6 HOH AAA 24 324 808 HOH HOH . K 6 HOH AAA 25 325 813 HOH HOH . K 6 HOH AAA 26 326 844 HOH HOH . K 6 HOH AAA 27 327 818 HOH HOH . K 6 HOH AAA 28 328 851 HOH HOH . K 6 HOH AAA 29 329 823 HOH HOH . K 6 HOH AAA 30 330 804 HOH HOH . K 6 HOH AAA 31 331 807 HOH HOH . K 6 HOH AAA 32 332 812 HOH HOH . K 6 HOH AAA 33 333 876 HOH HOH . K 6 HOH AAA 34 334 811 HOH HOH . K 6 HOH AAA 35 335 828 HOH HOH . K 6 HOH AAA 36 336 833 HOH HOH . K 6 HOH AAA 37 337 832 HOH HOH . K 6 HOH AAA 38 338 837 HOH HOH . K 6 HOH AAA 39 339 879 HOH HOH . K 6 HOH AAA 40 340 863 HOH HOH . K 6 HOH AAA 41 341 2 HOH HOH . K 6 HOH AAA 42 342 914 HOH HOH . K 6 HOH AAA 43 343 852 HOH HOH . K 6 HOH AAA 44 344 820 HOH HOH . K 6 HOH AAA 45 345 904 HOH HOH . K 6 HOH AAA 46 346 810 HOH HOH . K 6 HOH AAA 47 347 819 HOH HOH . K 6 HOH AAA 48 348 854 HOH HOH . K 6 HOH AAA 49 349 856 HOH HOH . K 6 HOH AAA 50 350 916 HOH HOH . K 6 HOH AAA 51 351 839 HOH HOH . K 6 HOH AAA 52 352 824 HOH HOH . K 6 HOH AAA 53 353 817 HOH HOH . K 6 HOH AAA 54 354 912 HOH HOH . K 6 HOH AAA 55 355 859 HOH HOH . K 6 HOH AAA 56 356 830 HOH HOH . K 6 HOH AAA 57 357 829 HOH HOH . K 6 HOH AAA 58 358 838 HOH HOH . K 6 HOH AAA 59 359 814 HOH HOH . K 6 HOH AAA 60 360 877 HOH HOH . K 6 HOH AAA 61 361 902 HOH HOH . K 6 HOH AAA 62 362 901 HOH HOH . K 6 HOH AAA 63 363 897 HOH HOH . K 6 HOH AAA 64 364 826 HOH HOH . K 6 HOH AAA 65 365 806 HOH HOH . K 6 HOH AAA 66 366 857 HOH HOH . K 6 HOH AAA 67 367 846 HOH HOH . K 6 HOH AAA 68 368 822 HOH HOH . K 6 HOH AAA 69 369 871 HOH HOH . K 6 HOH AAA 70 370 850 HOH HOH . K 6 HOH AAA 71 371 834 HOH HOH . K 6 HOH AAA 72 372 872 HOH HOH . K 6 HOH AAA 73 373 907 HOH HOH . K 6 HOH AAA 74 374 893 HOH HOH . K 6 HOH AAA 75 375 885 HOH HOH . K 6 HOH AAA 76 376 3 HOH HOH . K 6 HOH AAA 77 377 898 HOH HOH . K 6 HOH AAA 78 378 880 HOH HOH . K 6 HOH AAA 79 379 896 HOH HOH . K 6 HOH AAA 80 380 572 HOH HOH . K 6 HOH AAA 81 381 881 HOH HOH . K 6 HOH AAA 82 382 868 HOH HOH . K 6 HOH AAA 83 383 878 HOH HOH . K 6 HOH AAA 84 384 910 HOH HOH . K 6 HOH AAA 85 385 862 HOH HOH . K 6 HOH AAA 86 386 840 HOH HOH . K 6 HOH AAA 87 387 530 HOH HOH . K 6 HOH AAA 88 388 888 HOH HOH . K 6 HOH AAA 89 389 889 HOH HOH . K 6 HOH AAA 90 390 827 HOH HOH . K 6 HOH AAA 91 391 909 HOH HOH . K 6 HOH AAA 92 392 866 HOH HOH . L 6 HOH BBB 1 401 583 HOH HOH . L 6 HOH BBB 2 402 523 HOH HOH . L 6 HOH BBB 3 403 577 HOH HOH . L 6 HOH BBB 4 404 546 HOH HOH . L 6 HOH BBB 5 405 525 HOH HOH . L 6 HOH BBB 6 406 503 HOH HOH . L 6 HOH BBB 7 407 564 HOH HOH . L 6 HOH BBB 8 408 519 HOH HOH . L 6 HOH BBB 9 409 540 HOH HOH . L 6 HOH BBB 10 410 522 HOH HOH . L 6 HOH BBB 11 411 7 HOH HOH . L 6 HOH BBB 12 412 508 HOH HOH . L 6 HOH BBB 13 413 514 HOH HOH . L 6 HOH BBB 14 414 517 HOH HOH . L 6 HOH BBB 15 415 594 HOH HOH . L 6 HOH BBB 16 416 511 HOH HOH . L 6 HOH BBB 17 417 510 HOH HOH . L 6 HOH BBB 18 418 545 HOH HOH . L 6 HOH BBB 19 419 504 HOH HOH . L 6 HOH BBB 20 420 506 HOH HOH . L 6 HOH BBB 21 421 524 HOH HOH . L 6 HOH BBB 22 422 516 HOH HOH . L 6 HOH BBB 23 423 507 HOH HOH . L 6 HOH BBB 24 424 529 HOH HOH . L 6 HOH BBB 25 425 532 HOH HOH . L 6 HOH BBB 26 426 578 HOH HOH . L 6 HOH BBB 27 427 555 HOH HOH . L 6 HOH BBB 28 428 518 HOH HOH . L 6 HOH BBB 29 429 535 HOH HOH . L 6 HOH BBB 30 430 559 HOH HOH . L 6 HOH BBB 31 431 512 HOH HOH . L 6 HOH BBB 32 432 527 HOH HOH . L 6 HOH BBB 33 433 538 HOH HOH . L 6 HOH BBB 34 434 502 HOH HOH . L 6 HOH BBB 35 435 509 HOH HOH . L 6 HOH BBB 36 436 515 HOH HOH . L 6 HOH BBB 37 437 563 HOH HOH . L 6 HOH BBB 38 438 543 HOH HOH . L 6 HOH BBB 39 439 552 HOH HOH . L 6 HOH BBB 40 440 541 HOH HOH . L 6 HOH BBB 41 441 547 HOH HOH . L 6 HOH BBB 42 442 513 HOH HOH . L 6 HOH BBB 43 443 505 HOH HOH . L 6 HOH BBB 44 444 560 HOH HOH . L 6 HOH BBB 45 445 557 HOH HOH . L 6 HOH BBB 46 446 534 HOH HOH . L 6 HOH BBB 47 447 567 HOH HOH . L 6 HOH BBB 48 448 593 HOH HOH . L 6 HOH BBB 49 449 11 HOH HOH . L 6 HOH BBB 50 450 537 HOH HOH . L 6 HOH BBB 51 451 553 HOH HOH . L 6 HOH BBB 52 452 12 HOH HOH . L 6 HOH BBB 53 453 569 HOH HOH . L 6 HOH BBB 54 454 542 HOH HOH . L 6 HOH BBB 55 455 551 HOH HOH . L 6 HOH BBB 56 456 528 HOH HOH . L 6 HOH BBB 57 457 568 HOH HOH . L 6 HOH BBB 58 458 892 HOH HOH . L 6 HOH BBB 59 459 13 HOH HOH . L 6 HOH BBB 60 460 544 HOH HOH . L 6 HOH BBB 61 461 5 HOH HOH . L 6 HOH BBB 62 462 531 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 5 47.354 0.564 64.444 1 54.1 0 C1 EDO 301 BBB 1 HETATM 2 O O1 EDO . . . I 5 47.622 1.235 65.724 1 55.26 0 O1 EDO 301 BBB 1 HETATM 3 C C2 EDO . . . I 5 46.271 1.116 63.573 1 62.81 0 C2 EDO 301 BBB 1 HETATM 4 O O2 EDO . . . I 5 45.006 0.481 63.742 1 48.73 0 O2 EDO 301 BBB 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #