data_7Q38 # _model_server_result.job_id w68HGlhGYpytw4aA6ZMpkg _model_server_result.datetime_utc '2024-11-23 09:00:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q38 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":309}' # _entry.id 7Q38 # _exptl.entry_id 7Q38 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.547 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description EICOSANE _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Q38 _cell.length_a 115.657 _cell.length_b 119.245 _cell.length_c 36.393 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q38 _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 217 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 216 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.301 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C20 H42' _chem_comp.formula_weight 282.547 _chem_comp.id LFA _chem_comp.mon_nstd_flag . _chem_comp.name EICOSANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'LIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LFA sing 200 n n C1 H11 LFA sing 201 n n C1 H12 LFA sing 202 n n C1 H13 LFA sing 203 n n C2 C3 LFA sing 204 n n C2 H21 LFA sing 205 n n C2 H22 LFA sing 206 n n C3 C4 LFA sing 207 n n C3 H31 LFA sing 208 n n C3 H32 LFA sing 209 n n C4 C5 LFA sing 210 n n C4 H41 LFA sing 211 n n C4 H42 LFA sing 212 n n C5 C6 LFA sing 213 n n C5 H51 LFA sing 214 n n C5 H52 LFA sing 215 n n C6 C7 LFA sing 216 n n C6 H61 LFA sing 217 n n C6 H62 LFA sing 218 n n C7 C8 LFA sing 219 n n C7 H71 LFA sing 220 n n C7 H72 LFA sing 221 n n C8 C9 LFA sing 222 n n C8 H81 LFA sing 223 n n C8 H82 LFA sing 224 n n C9 C10 LFA sing 225 n n C9 H91 LFA sing 226 n n C9 H92 LFA sing 227 n n C10 C11 LFA sing 228 n n C10 H101 LFA sing 229 n n C10 H102 LFA sing 230 n n C11 C12 LFA sing 231 n n C11 H111 LFA sing 232 n n C11 H112 LFA sing 233 n n C12 C13 LFA sing 234 n n C12 H121 LFA sing 235 n n C12 H122 LFA sing 236 n n C13 C14 LFA sing 237 n n C13 H131 LFA sing 238 n n C13 H132 LFA sing 239 n n C14 C15 LFA sing 240 n n C14 H141 LFA sing 241 n n C14 H142 LFA sing 242 n n C15 C16 LFA sing 243 n n C15 H151 LFA sing 244 n n C15 H152 LFA sing 245 n n C16 C17 LFA sing 246 n n C16 H161 LFA sing 247 n n C16 H162 LFA sing 248 n n C17 C18 LFA sing 249 n n C17 H171 LFA sing 250 n n C17 H172 LFA sing 251 n n C18 C19 LFA sing 252 n n C18 H181 LFA sing 253 n n C18 H182 LFA sing 254 n n C19 C20 LFA sing 255 n n C19 H191 LFA sing 256 n n C19 H192 LFA sing 257 n n C20 H201 LFA sing 258 n n C20 H202 LFA sing 259 n n C20 H203 LFA sing 260 n n # _atom_sites.entry_id 7Q38 _atom_sites.fract_transf_matrix[1][1] 0.008646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008386 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 301 301 RET RET . C 3 LFA A 1 302 1 LFA LFA . D 3 LFA A 1 303 2 LFA LFA . E 3 LFA A 1 304 3 LFA LFA . F 3 LFA A 1 305 4 LFA LFA . G 3 LFA A 1 306 5 LFA LFA . H 3 LFA A 1 307 6 LFA LFA . I 3 LFA A 1 308 7 LFA LFA . J 3 LFA A 1 309 8 LFA LFA . K 3 LFA A 1 310 9 LFA LFA . L 3 LFA A 1 311 10 LFA LFA . M 4 OLC A 1 312 11 OLC OLC . N 5 OLA A 1 313 12 OLA OLA . O 5 OLA A 1 314 13 OLA OLA . P 5 OLA A 1 315 14 OLA OLA . Q 6 HEX A 1 316 15 HEX HEX . R 6 HEX A 1 317 16 HEX HEX . S 6 HEX A 1 318 17 HEX HEX . T 6 HEX A 1 319 18 HEX HEX . U 7 SO4 A 1 320 19 SO4 SO4 . V 7 SO4 A 1 321 20 SO4 SO4 . W 8 AR A 1 322 1 AR AR . X 8 AR A 1 323 2 AR AR . Y 8 AR A 1 324 3 AR AR . Z 8 AR A 1 325 4 AR AR . AA 8 AR A 1 326 5 AR AR . BA 8 AR A 1 327 6 AR AR . CA 8 AR A 1 328 7 AR AR . DA 8 AR A 1 329 8 AR AR . EA 8 AR A 1 330 9 AR AR . FA 8 AR A 1 331 10 AR AR . GA 8 AR A 1 332 11 AR AR . HA 8 AR A 1 333 12 AR AR . IA 8 AR A 1 334 13 AR AR . JA 8 AR A 1 335 14 AR AR . KA 8 AR A 1 336 15 AR AR . LA 8 AR A 1 337 16 AR AR . MA 8 AR A 1 338 17 AR AR . NA 8 AR A 1 339 18 AR AR . OA 8 AR A 1 340 19 AR AR . PA 8 AR A 1 341 20 AR AR . QA 8 AR A 1 342 21 AR AR . RA 8 AR A 1 343 22 AR AR . SA 8 AR A 1 344 23 AR AR . TA 8 AR A 1 345 24 AR AR . UA 8 AR A 1 346 25 AR AR . VA 8 AR A 1 347 26 AR AR . WA 8 AR A 1 348 27 AR AR . XA 8 AR A 1 349 28 AR AR . YA 8 AR A 1 350 29 AR AR . ZA 8 AR A 1 351 30 AR AR . AB 8 AR A 1 352 31 AR AR . BB 8 AR A 1 353 32 AR AR . CB 8 AR A 1 354 33 AR AR . DB 8 AR A 1 355 34 AR AR . EB 8 AR A 1 356 35 AR AR . FB 8 AR A 1 357 36 AR AR . GB 8 AR A 1 358 37 AR AR . HB 8 AR A 1 359 38 AR AR . IB 8 AR A 1 360 39 AR AR . JB 8 AR A 1 361 40 AR AR . KB 8 AR A 1 362 41 AR AR . LB 8 AR A 1 363 42 AR AR . MB 8 AR A 1 364 43 AR AR . NB 8 AR A 1 365 44 AR AR . OB 8 AR A 1 366 45 AR AR . PB 8 AR A 1 367 46 AR AR . QB 8 AR A 1 368 47 AR AR . RB 9 HOH A 1 401 72 HOH HOH . RB 9 HOH A 2 402 51 HOH HOH . RB 9 HOH A 3 403 14 HOH HOH . RB 9 HOH A 4 404 67 HOH HOH . RB 9 HOH A 5 405 73 HOH HOH . RB 9 HOH A 6 406 80 HOH HOH . RB 9 HOH A 7 407 29 HOH HOH . RB 9 HOH A 8 408 81 HOH HOH . RB 9 HOH A 9 409 5 HOH HOH . RB 9 HOH A 10 410 13 HOH HOH . RB 9 HOH A 11 411 90 HOH HOH . RB 9 HOH A 12 412 62 HOH HOH . RB 9 HOH A 13 413 64 HOH HOH . RB 9 HOH A 14 414 22 HOH HOH . RB 9 HOH A 15 415 20 HOH HOH . RB 9 HOH A 16 416 16 HOH HOH . RB 9 HOH A 17 417 17 HOH HOH . RB 9 HOH A 18 418 10 HOH HOH . RB 9 HOH A 19 419 7 HOH HOH . RB 9 HOH A 20 420 77 HOH HOH . RB 9 HOH A 21 421 101 HOH HOH . RB 9 HOH A 22 422 58 HOH HOH . RB 9 HOH A 23 423 89 HOH HOH . RB 9 HOH A 24 424 37 HOH HOH . RB 9 HOH A 25 425 25 HOH HOH . RB 9 HOH A 26 426 34 HOH HOH . RB 9 HOH A 27 427 39 HOH HOH . RB 9 HOH A 28 428 55 HOH HOH . RB 9 HOH A 29 429 100 HOH HOH . RB 9 HOH A 30 430 3 HOH HOH . RB 9 HOH A 31 431 88 HOH HOH . RB 9 HOH A 32 432 87 HOH HOH . RB 9 HOH A 33 433 12 HOH HOH . RB 9 HOH A 34 434 91 HOH HOH . RB 9 HOH A 35 435 38 HOH HOH . RB 9 HOH A 36 436 82 HOH HOH . RB 9 HOH A 37 437 50 HOH HOH . RB 9 HOH A 38 438 69 HOH HOH . RB 9 HOH A 39 439 92 HOH HOH . RB 9 HOH A 40 440 11 HOH HOH . RB 9 HOH A 41 441 41 HOH HOH . RB 9 HOH A 42 442 70 HOH HOH . RB 9 HOH A 43 443 54 HOH HOH . RB 9 HOH A 44 444 74 HOH HOH . RB 9 HOH A 45 445 36 HOH HOH . RB 9 HOH A 46 446 68 HOH HOH . RB 9 HOH A 47 447 23 HOH HOH . RB 9 HOH A 48 448 35 HOH HOH . RB 9 HOH A 49 449 15 HOH HOH . RB 9 HOH A 50 450 114 HOH HOH . RB 9 HOH A 51 451 6 HOH HOH . RB 9 HOH A 52 452 27 HOH HOH . RB 9 HOH A 53 453 1 HOH HOH . RB 9 HOH A 54 454 33 HOH HOH . RB 9 HOH A 55 455 75 HOH HOH . RB 9 HOH A 56 456 84 HOH HOH . RB 9 HOH A 57 457 86 HOH HOH . RB 9 HOH A 58 458 2 HOH HOH . RB 9 HOH A 59 459 8 HOH HOH . RB 9 HOH A 60 460 43 HOH HOH . RB 9 HOH A 61 461 71 HOH HOH . RB 9 HOH A 62 462 4 HOH HOH . RB 9 HOH A 63 463 21 HOH HOH . RB 9 HOH A 64 464 9 HOH HOH . RB 9 HOH A 65 465 79 HOH HOH . RB 9 HOH A 66 466 60 HOH HOH . RB 9 HOH A 67 467 99 HOH HOH . RB 9 HOH A 68 468 19 HOH HOH . RB 9 HOH A 69 469 102 HOH HOH . RB 9 HOH A 70 470 76 HOH HOH . RB 9 HOH A 71 471 32 HOH HOH . RB 9 HOH A 72 472 116 HOH HOH . RB 9 HOH A 73 473 31 HOH HOH . RB 9 HOH A 74 474 96 HOH HOH . RB 9 HOH A 75 475 40 HOH HOH . RB 9 HOH A 76 476 26 HOH HOH . RB 9 HOH A 77 477 98 HOH HOH . RB 9 HOH A 78 478 115 HOH HOH . RB 9 HOH A 79 479 83 HOH HOH . RB 9 HOH A 80 480 65 HOH HOH . RB 9 HOH A 81 481 63 HOH HOH . RB 9 HOH A 82 482 117 HOH HOH . RB 9 HOH A 83 483 78 HOH HOH . RB 9 HOH A 84 484 108 HOH HOH . RB 9 HOH A 85 485 95 HOH HOH . RB 9 HOH A 86 486 30 HOH HOH . RB 9 HOH A 87 487 44 HOH HOH . RB 9 HOH A 88 488 107 HOH HOH . RB 9 HOH A 89 489 112 HOH HOH . RB 9 HOH A 90 490 45 HOH HOH . RB 9 HOH A 91 491 46 HOH HOH . RB 9 HOH A 92 492 52 HOH HOH . RB 9 HOH A 93 493 42 HOH HOH . RB 9 HOH A 94 494 24 HOH HOH . RB 9 HOH A 95 495 110 HOH HOH . RB 9 HOH A 96 496 61 HOH HOH . RB 9 HOH A 97 497 48 HOH HOH . RB 9 HOH A 98 498 93 HOH HOH . RB 9 HOH A 99 499 119 HOH HOH . RB 9 HOH A 100 500 47 HOH HOH . RB 9 HOH A 101 501 85 HOH HOH . RB 9 HOH A 102 502 97 HOH HOH . RB 9 HOH A 103 503 57 HOH HOH . RB 9 HOH A 104 504 104 HOH HOH . RB 9 HOH A 105 505 106 HOH HOH . RB 9 HOH A 106 506 105 HOH HOH . RB 9 HOH A 107 507 18 HOH HOH . RB 9 HOH A 108 508 113 HOH HOH . RB 9 HOH A 109 509 53 HOH HOH . RB 9 HOH A 110 510 111 HOH HOH . RB 9 HOH A 111 511 59 HOH HOH . RB 9 HOH A 112 512 56 HOH HOH . RB 9 HOH A 113 513 118 HOH HOH . RB 9 HOH A 114 514 28 HOH HOH . RB 9 HOH A 115 515 49 HOH HOH . RB 9 HOH A 116 516 103 HOH HOH . RB 9 HOH A 117 517 66 HOH HOH . RB 9 HOH A 118 518 109 HOH HOH . RB 9 HOH A 119 519 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 LFA . . . J 3 -26.987 -34.492 0.66 0.37 24.63 ? C2 LFA 309 A 1 HETATM 2 C C3 LFA . . . J 3 -27.495 -34.218 2.07 0.37 23.08 ? C3 LFA 309 A 1 HETATM 3 C C4 LFA . . . J 3 -27.817 -35.418 2.896 0.37 24.98 ? C4 LFA 309 A 1 HETATM 4 C C5 LFA . . . J 3 -27.771 -35.272 4.417 0.37 25.42 ? C5 LFA 309 A 1 HETATM 5 C C6 LFA . . . J 3 -27.054 -36.42 5.148 0.37 23.1 ? C6 LFA 309 A 1 HETATM 6 C C7 LFA . . . J 3 -27.812 -37.031 6.351 0.37 22.79 ? C7 LFA 309 A 1 HETATM 7 C C8 LFA . . . J 3 -27.443 -38.477 6.688 0.37 25.09 ? C8 LFA 309 A 1 HETATM 8 C C9 LFA . . . J 3 -28.401 -39.25 7.591 0.37 20.48 ? C9 LFA 309 A 1 HETATM 9 C C10 LFA . . . J 3 -28.944 -38.44 8.748 0.37 20.51 ? C10 LFA 309 A 1 HETATM 10 C C11 LFA . . . J 3 -29.199 -39.192 9.975 0.37 20.38 ? C11 LFA 309 A 1 HETATM 11 C C12 LFA . . . J 3 -30.53 -39.913 10.033 0.37 21.24 ? C12 LFA 309 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 11 #