data_7Q4X # _model_server_result.job_id 1votQvYPeva6wfYejfg83Q _model_server_result.datetime_utc '2024-11-13 20:31:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q4x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 7Q4X # _exptl.entry_id 7Q4X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 367.807 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Cefaclor _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7Q4X _cell.length_a 94.75 _cell.length_b 94.75 _cell.length_c 142.62 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q4X _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 50 A CYS 53 1_555 A SG CYS 59 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? disulf ? disulf2 A SG CYS 72 A CYS 75 1_555 A SG CYS 88 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf3 A SG CYS 87 A CYS 90 1_555 A SG CYS 98 A CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf4 A SG CYS 120 A CYS 123 1_555 A SG CYS 165 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf5 A SG CYS 164 A CYS 167 1_555 A SG CYS 173 A CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf6 A SG CYS 196 A CYS 199 1_555 A SG CYS 242 A CYS 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf7 A SG CYS 241 A CYS 244 1_555 A SG CYS 249 A CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf8 A SG CYS 261 A CYS 264 1_555 A SG CYS 275 A CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf9 A SG CYS 274 A CYS 277 1_555 A SG CYS 285 A CYS 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? disulf ? disulf10 A SG CYS 312 A CYS 315 1_555 A SG CYS 357 A CYS 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf11 A SG CYS 356 A CYS 359 1_555 A SG CYS 365 A CYS 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf12 A SG CYS 388 A CYS 391 1_555 A SG CYS 434 A CYS 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf13 A SG CYS 433 A CYS 436 1_555 A SG CYS 444 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf14 A SG CYS 457 A CYS 460 1_555 A SG CYS 473 A CYS 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? disulf ? disulf15 A SG CYS 472 A CYS 475 1_555 A SG CYS 483 A CYS 486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? disulf ? disulf16 A SG CYS 510 A CYS 513 1_555 A SG CYS 555 A CYS 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? disulf ? disulf17 A SG CYS 554 A CYS 557 1_555 A SG CYS 563 A CYS 566 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? # _chem_comp.formula 'C15 H14 Cl N3 O4 S' _chem_comp.formula_weight 367.807 _chem_comp.id 8XI _chem_comp.mon_nstd_flag . _chem_comp.name Cefaclor _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(6R,7R)-7-[[(2R)-2-azanyl-2-phenyl-ethanoyl]amino]-3-chloranyl-8-oxidanylidene-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C15 8XI doub 1 n n C15 C2 8XI sing 2 n n C15 O4 8XI sing 3 n n C1 N1 8XI sing 4 n n C1 O1 8XI doub 5 n n C1 C6 8XI sing 6 n n N1 C2 8XI sing 7 n n N1 C5 8XI sing 8 n n C2 C3 8XI doub 9 n n CL1 C3 8XI sing 10 n n C6 C5 8XI sing 11 n n C6 N2 8XI sing 12 n n C5 S1 8XI sing 13 n n C3 C4 8XI sing 14 n n O2 C7 8XI doub 15 n n N2 C7 8XI sing 16 n n C7 C8 8XI sing 17 n n C4 S1 8XI sing 18 n n C8 N3 8XI sing 19 n n C8 C9 8XI sing 20 n n C10 C9 8XI doub 21 n y C10 C11 8XI sing 22 n y C9 C14 8XI sing 23 n y C11 C12 8XI doub 24 n y C14 C13 8XI doub 25 n y C12 C13 8XI sing 26 n y O4 H3 8XI sing 27 n n C4 H4 8XI sing 28 n n C4 H5 8XI sing 29 n n C5 H6 8XI sing 30 n n C6 H7 8XI sing 31 n n N2 H8 8XI sing 32 n n C8 H9 8XI sing 33 n n N3 H10 8XI sing 34 n n N3 H11 8XI sing 35 n n C14 H13 8XI sing 36 n n C13 H14 8XI sing 37 n n C12 H15 8XI sing 38 n n C11 H16 8XI sing 39 n n C10 H17 8XI sing 40 n n # _atom_sites.entry_id 7Q4X _atom_sites.fract_transf_matrix[1][1] 0.010554 _atom_sites.fract_transf_matrix[1][2] 0.006093 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8XI A 1 601 1 8XI CEC . C 2 8XI A 1 602 2 8XI CEC . D 3 MLI A 1 603 1 MLI MLI . E 3 MLI A 1 604 2 MLI MLI . F 3 MLI A 1 605 3 MLI MLI . G 3 MLI A 1 606 4 MLI MLI . H 3 MLI A 1 607 5 MLI MLI . I 4 LMR A 1 608 1 LMR LMR . J 5 FMT A 1 609 1 FMT FMT . K 5 FMT A 1 610 2 FMT FMT . L 5 FMT A 1 611 3 FMT FMT . M 5 FMT A 1 612 4 FMT FMT . N 5 FMT A 1 613 5 FMT FMT . O 5 FMT A 1 614 6 FMT FMT . P 5 FMT A 1 615 7 FMT FMT . Q 6 ACT A 1 616 1 ACT ACT . R 6 ACT A 1 617 2 ACT ACT . S 7 HOH A 1 701 116 HOH HOH . S 7 HOH A 2 702 20 HOH HOH . S 7 HOH A 3 703 97 HOH HOH . S 7 HOH A 4 704 96 HOH HOH . S 7 HOH A 5 705 6 HOH HOH . S 7 HOH A 6 706 23 HOH HOH . S 7 HOH A 7 707 135 HOH HOH . S 7 HOH A 8 708 103 HOH HOH . S 7 HOH A 9 709 75 HOH HOH . S 7 HOH A 10 710 33 HOH HOH . S 7 HOH A 11 711 29 HOH HOH . S 7 HOH A 12 712 3 HOH HOH . S 7 HOH A 13 713 22 HOH HOH . S 7 HOH A 14 714 101 HOH HOH . S 7 HOH A 15 715 15 HOH HOH . S 7 HOH A 16 716 71 HOH HOH . S 7 HOH A 17 717 64 HOH HOH . S 7 HOH A 18 718 26 HOH HOH . S 7 HOH A 19 719 125 HOH HOH . S 7 HOH A 20 720 41 HOH HOH . S 7 HOH A 21 721 24 HOH HOH . S 7 HOH A 22 722 121 HOH HOH . S 7 HOH A 23 723 95 HOH HOH . S 7 HOH A 24 724 7 HOH HOH . S 7 HOH A 25 725 21 HOH HOH . S 7 HOH A 26 726 30 HOH HOH . S 7 HOH A 27 727 45 HOH HOH . S 7 HOH A 28 728 12 HOH HOH . S 7 HOH A 29 729 13 HOH HOH . S 7 HOH A 30 730 67 HOH HOH . S 7 HOH A 31 731 36 HOH HOH . S 7 HOH A 32 732 114 HOH HOH . S 7 HOH A 33 733 8 HOH HOH . S 7 HOH A 34 734 5 HOH HOH . S 7 HOH A 35 735 88 HOH HOH . S 7 HOH A 36 736 28 HOH HOH . S 7 HOH A 37 737 137 HOH HOH . S 7 HOH A 38 738 90 HOH HOH . S 7 HOH A 39 739 123 HOH HOH . S 7 HOH A 40 740 4 HOH HOH . S 7 HOH A 41 741 2 HOH HOH . S 7 HOH A 42 742 128 HOH HOH . S 7 HOH A 43 743 127 HOH HOH . S 7 HOH A 44 744 37 HOH HOH . S 7 HOH A 45 745 16 HOH HOH . S 7 HOH A 46 746 81 HOH HOH . S 7 HOH A 47 747 107 HOH HOH . S 7 HOH A 48 748 102 HOH HOH . S 7 HOH A 49 749 72 HOH HOH . S 7 HOH A 50 750 10 HOH HOH . S 7 HOH A 51 751 61 HOH HOH . S 7 HOH A 52 752 9 HOH HOH . S 7 HOH A 53 753 42 HOH HOH . S 7 HOH A 54 754 27 HOH HOH . S 7 HOH A 55 755 108 HOH HOH . S 7 HOH A 56 756 85 HOH HOH . S 7 HOH A 57 757 84 HOH HOH . S 7 HOH A 58 758 17 HOH HOH . S 7 HOH A 59 759 131 HOH HOH . S 7 HOH A 60 760 77 HOH HOH . S 7 HOH A 61 761 51 HOH HOH . S 7 HOH A 62 762 19 HOH HOH . S 7 HOH A 63 763 35 HOH HOH . S 7 HOH A 64 764 32 HOH HOH . S 7 HOH A 65 765 52 HOH HOH . S 7 HOH A 66 766 47 HOH HOH . S 7 HOH A 67 767 40 HOH HOH . S 7 HOH A 68 768 11 HOH HOH . S 7 HOH A 69 769 39 HOH HOH . S 7 HOH A 70 770 38 HOH HOH . S 7 HOH A 71 771 43 HOH HOH . S 7 HOH A 72 772 48 HOH HOH . S 7 HOH A 73 773 82 HOH HOH . S 7 HOH A 74 774 62 HOH HOH . S 7 HOH A 75 775 58 HOH HOH . S 7 HOH A 76 776 60 HOH HOH . S 7 HOH A 77 777 53 HOH HOH . S 7 HOH A 78 778 56 HOH HOH . S 7 HOH A 79 779 31 HOH HOH . S 7 HOH A 80 780 133 HOH HOH . S 7 HOH A 81 781 66 HOH HOH . S 7 HOH A 82 782 111 HOH HOH . S 7 HOH A 83 783 55 HOH HOH . S 7 HOH A 84 784 124 HOH HOH . S 7 HOH A 85 785 120 HOH HOH . S 7 HOH A 86 786 25 HOH HOH . S 7 HOH A 87 787 106 HOH HOH . S 7 HOH A 88 788 122 HOH HOH . S 7 HOH A 89 789 132 HOH HOH . S 7 HOH A 90 790 87 HOH HOH . S 7 HOH A 91 791 98 HOH HOH . S 7 HOH A 92 792 105 HOH HOH . S 7 HOH A 93 793 49 HOH HOH . S 7 HOH A 94 794 100 HOH HOH . S 7 HOH A 95 795 74 HOH HOH . S 7 HOH A 96 796 117 HOH HOH . S 7 HOH A 97 797 34 HOH HOH . S 7 HOH A 98 798 109 HOH HOH . S 7 HOH A 99 799 14 HOH HOH . S 7 HOH A 100 800 126 HOH HOH . S 7 HOH A 101 801 94 HOH HOH . S 7 HOH A 102 802 129 HOH HOH . S 7 HOH A 103 803 78 HOH HOH . S 7 HOH A 104 804 113 HOH HOH . S 7 HOH A 105 805 91 HOH HOH . S 7 HOH A 106 806 99 HOH HOH . S 7 HOH A 107 807 89 HOH HOH . S 7 HOH A 108 808 115 HOH HOH . S 7 HOH A 109 809 79 HOH HOH . S 7 HOH A 110 810 44 HOH HOH . S 7 HOH A 111 811 68 HOH HOH . S 7 HOH A 112 812 92 HOH HOH . S 7 HOH A 113 813 86 HOH HOH . S 7 HOH A 114 814 110 HOH HOH . S 7 HOH A 115 815 76 HOH HOH . S 7 HOH A 116 816 46 HOH HOH . S 7 HOH A 117 817 59 HOH HOH . S 7 HOH A 118 818 80 HOH HOH . S 7 HOH A 119 819 136 HOH HOH . S 7 HOH A 120 820 93 HOH HOH . S 7 HOH A 121 821 50 HOH HOH . S 7 HOH A 122 822 54 HOH HOH . S 7 HOH A 123 823 139 HOH HOH . S 7 HOH A 124 824 119 HOH HOH . S 7 HOH A 125 825 138 HOH HOH . S 7 HOH A 126 826 70 HOH HOH . S 7 HOH A 127 827 69 HOH HOH . S 7 HOH A 128 828 1 HOH HOH . S 7 HOH A 129 829 73 HOH HOH . S 7 HOH A 130 830 130 HOH HOH . S 7 HOH A 131 831 112 HOH HOH . S 7 HOH A 132 832 63 HOH HOH . S 7 HOH A 133 833 18 HOH HOH . S 7 HOH A 134 834 83 HOH HOH . S 7 HOH A 135 835 57 HOH HOH . S 7 HOH A 136 836 118 HOH HOH . S 7 HOH A 137 837 134 HOH HOH . S 7 HOH A 138 838 104 HOH HOH . S 7 HOH A 139 839 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 8XI . . . B 2 56.649 37.538 64.707 1 87.37 ? C1 8XI 601 A 1 HETATM 2 O O1 8XI . . . B 2 57.504 38.362 64.985 1 81.7 ? O1 8XI 601 A 1 HETATM 3 N N1 8XI . . . B 2 55.387 37.672 64.727 1 72.01 ? N1 8XI 601 A 1 HETATM 4 C C2 8XI . . . B 2 54.73 38.828 64.933 1 77.42 ? C2 8XI 601 A 1 HETATM 5 C C3 8XI . . . B 2 53.538 38.816 65.571 1 74.29 ? C3 8XI 601 A 1 HETATM 6 CL CL1 8XI . . . B 2 52.273 39.927 65.048 1 82.52 ? CL1 8XI 601 A 1 HETATM 7 O O4 8XI . . . B 2 56.206 40.645 65.189 1 84.22 ? O4 8XI 601 A 1 HETATM 8 C C15 8XI . . . B 2 55.349 40.095 64.473 1 85.88 ? C15 8XI 601 A 1 HETATM 9 O O3 8XI . . . B 2 54.986 40.593 63.387 1 90.95 ? O3 8XI 601 A 1 HETATM 10 C C4 8XI . . . B 2 53.303 37.938 66.821 1 70.59 ? C4 8XI 601 A 1 HETATM 11 S S1 8XI . . . B 2 54.487 36.643 66.897 1 76.38 ? S1 8XI 601 A 1 HETATM 12 C C5 8XI . . . B 2 55.032 36.371 65.271 1 76.77 ? C5 8XI 601 A 1 HETATM 13 C C6 8XI . . . B 2 56.598 36.148 65.207 1 83.34 ? C6 8XI 601 A 1 HETATM 14 N N2 8XI . . . B 2 57.092 36.011 66.571 1 81.62 ? N2 8XI 601 A 1 HETATM 15 C C7 8XI . . . B 2 58.23 35.326 66.807 1 90.81 ? C7 8XI 601 A 1 HETATM 16 O O2 8XI . . . B 2 58.87 34.765 65.921 1 83.75 ? O2 8XI 601 A 1 HETATM 17 C C8 8XI . . . B 2 58.667 35.208 68.237 1 90.68 ? C8 8XI 601 A 1 HETATM 18 N N3 8XI . . . B 2 60.134 34.99 68.291 1 89.31 ? N3 8XI 601 A 1 HETATM 19 C C9 8XI . . . B 2 57.981 34.055 68.843 1 96.46 ? C9 8XI 601 A 1 HETATM 20 C C14 8XI . . . B 2 56.715 34.23 69.443 1 93.63 ? C14 8XI 601 A 1 HETATM 21 C C13 8XI . . . B 2 56.048 33.135 69.995 1 83.76 ? C13 8XI 601 A 1 HETATM 22 C C12 8XI . . . B 2 56.633 31.846 69.933 1 94.33 ? C12 8XI 601 A 1 HETATM 23 C C11 8XI . . . B 2 57.895 31.664 69.325 1 97.17 ? C11 8XI 601 A 1 HETATM 24 C C10 8XI . . . B 2 58.565 32.765 68.771 1 92.68 ? C10 8XI 601 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 24 #