data_7Q56
#
_model_server_result.job_id            wpRiPWUE1at_QYMkxYBeGQ 
_model_server_result.datetime_utc      '2024-10-20 00:49:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7q56 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":401}' 
#
_entry.id    7Q56 
#
_exptl.entry_id    7Q56 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7Q56 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Q56 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexadecameric 
_pdbx_struct_assembly.oligomeric_count      16 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
? 3 CA N N 
? 3 DA N N 
? 3 EA N N 
? 3 FA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 355 I CYS 349 1_555 A SG CYS 364 I CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 C SG CYS 355 K CYS 349 1_555 C SG CYS 364 K CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf3 E SG CYS 355 A CYS 349 1_555 E SG CYS 364 A CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 G SG CYS 355 C CYS 349 1_555 G SG CYS 364 C CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf5 I SG CYS 355 Q CYS 349 1_555 I SG CYS 364 Q CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf6 K SG CYS 355 O CYS 349 1_555 K SG CYS 364 O CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf7 M SG CYS 355 G CYS 349 1_555 M SG CYS 364 G CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf8 O SG CYS 355 E CYS 349 1_555 O SG CYS 364 E CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7Q56 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Q 3 NAD J 1 401 370 NAD NAD . 
R 3 NAD K 1 401 365 NAD NAD . 
S 3 NAD K 1 402 365 NAD NAD . 
T 3 NAD L 1 401 370 NAD NAD . 
U 3 NAD A 1 401 365 NAD NAD . 
V 3 NAD B 1 401 370 NAD NAD . 
W 3 NAD C 1 401 365 NAD NAD . 
X 3 NAD D 1 401 370 NAD NAD . 
Y 3 NAD Q 1 401 365 NAD NAD . 
Z 3 NAD Q 1 402 365 NAD NAD . 
AA 3 NAD R 1 401 370 NAD NAD . 
BA 3 NAD O 1 401 365 NAD NAD . 
CA 3 NAD P 1 401 370 NAD NAD . 
DA 3 NAD G 1 401 365 NAD NAD . 
EA 3 NAD H 1 401 370 NAD NAD . 
FA 3 NAD F 1 401 370 NAD NAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . X 3 235.374 224.516 162.495 1 252.87 ? PA NAD 401 D 1 
HETATM 2 O O1A NAD . . . X 3 236.327 224.774 163.63 1 252.87 ? O1A NAD 401 D 1 
HETATM 3 O O2A NAD . . . X 3 234.119 223.896 163.033 1 252.87 ? O2A NAD 401 D 1 
HETATM 4 O O5B NAD . . . X 3 236.083 223.44 161.434 1 252.87 ? O5B NAD 401 D 1 
HETATM 5 C C5B NAD . . . X 3 236.621 222.249 162.016 1 252.87 ? C5B NAD 401 D 1 
HETATM 6 C C4B NAD . . . X 3 235.771 221.007 161.587 1 252.87 ? C4B NAD 401 D 1 
HETATM 7 O O4B NAD . . . X 3 236.666 220.021 160.678 1 252.87 ? O4B NAD 401 D 1 
HETATM 8 C C3B NAD . . . X 3 235.393 220.336 162.63 1 252.87 ? C3B NAD 401 D 1 
HETATM 9 O O3B NAD . . . X 3 233.926 220.043 162.527 1 252.87 ? O3B NAD 401 D 1 
HETATM 10 C C2B NAD . . . X 3 236.171 218.994 162.586 1 252.87 ? C2B NAD 401 D 1 
HETATM 11 O O2B NAD . . . X 3 235.391 217.99 163.075 1 252.87 ? O2B NAD 401 D 1 
HETATM 12 C C1B NAD . . . X 3 236.419 218.801 161.101 1 252.87 ? C1B NAD 401 D 1 
HETATM 13 N N9A NAD . . . X 3 237.581 217.947 160.874 1 252.87 ? N9A NAD 401 D 1 
HETATM 14 C C8A NAD . . . X 3 238.388 217.153 161.566 1 252.87 ? C8A NAD 401 D 1 
HETATM 15 N N7A NAD . . . X 3 239.29 216.66 160.685 1 252.87 ? N7A NAD 401 D 1 
HETATM 16 C C5A NAD . . . X 3 239.011 217.161 159.465 1 252.87 ? C5A NAD 401 D 1 
HETATM 17 C C6A NAD . . . X 3 239.615 216.989 158.222 1 252.87 ? C6A NAD 401 D 1 
HETATM 18 N N6A NAD . . . X 3 240.775 216.192 157.754 1 252.87 ? N6A NAD 401 D 1 
HETATM 19 N N1A NAD . . . X 3 239.142 217.606 157.158 1 252.87 ? N1A NAD 401 D 1 
HETATM 20 C C2A NAD . . . X 3 238.052 218.435 157.27 1 252.87 ? C2A NAD 401 D 1 
HETATM 21 N N3A NAD . . . X 3 237.457 218.608 158.465 1 252.87 ? N3A NAD 401 D 1 
HETATM 22 C C4A NAD . . . X 3 237.95 217.965 159.57 1 252.87 ? C4A NAD 401 D 1 
HETATM 23 O O3 NAD . . . X 3 235.018 225.934 161.744 1 252.87 ? O3 NAD 401 D 1 
HETATM 24 P PN NAD . . . X 3 233.681 226.888 162.168 1 252.87 ? PN NAD 401 D 1 
HETATM 25 O O1N NAD . . . X 3 232.566 226.031 162.785 1 252.87 ? O1N NAD 401 D 1 
HETATM 26 O O2N NAD . . . X 3 233.125 227.541 160.934 1 252.87 ? O2N NAD 401 D 1 
HETATM 27 O O5D NAD . . . X 3 234.085 227.992 163.293 1 252.87 ? O5D NAD 401 D 1 
HETATM 28 C C5D NAD . . . X 3 235.164 227.711 164.141 1 252.87 ? C5D NAD 401 D 1 
HETATM 29 C C4D NAD . . . X 3 236.396 228.284 163.479 1 252.87 ? C4D NAD 401 D 1 
HETATM 30 O O4D NAD . . . X 3 236.603 229.818 163.91 1 252.87 ? O4D NAD 401 D 1 
HETATM 31 C C3D NAD . . . X 3 237.472 227.685 163.913 1 252.87 ? C3D NAD 401 D 1 
HETATM 32 O O3D NAD . . . X 3 237.744 226.449 163.054 1 252.87 ? O3D NAD 401 D 1 
HETATM 33 C C2D NAD . . . X 3 238.542 228.703 163.688 1 252.87 ? C2D NAD 401 D 1 
HETATM 34 O O2D NAD . . . X 3 239.239 228.379 162.541 1 252.87 ? O2D NAD 401 D 1 
HETATM 35 C C1D NAD . . . X 3 237.767 230.053 163.481 1 252.87 ? C1D NAD 401 D 1 
HETATM 36 N N1N NAD . . . X 3 238.435 231.149 164.253 1 252.87 ? N1N NAD 401 D 1 
HETATM 37 C C2N NAD . . . X 3 237.705 232.085 164.957 1 252.87 ? C2N NAD 401 D 1 
HETATM 38 C C3N NAD . . . X 3 238.377 233.089 165.656 1 252.87 ? C3N NAD 401 D 1 
HETATM 39 C C7N NAD . . . X 3 237.599 234.182 166.47 1 252.87 ? C7N NAD 401 D 1 
HETATM 40 O O7N NAD . . . X 3 238.214 234.974 167.114 1 252.87 ? O7N NAD 401 D 1 
HETATM 41 N N7N NAD . . . X 3 236.115 234.227 166.429 1 252.87 ? N7N NAD 401 D 1 
HETATM 42 C C4N NAD . . . X 3 239.741 233.151 165.647 1 252.87 ? C4N NAD 401 D 1 
HETATM 43 C C5N NAD . . . X 3 240.457 232.217 164.948 1 252.87 ? C5N NAD 401 D 1 
HETATM 44 C C6N NAD . . . X 3 239.796 231.21 164.245 1 252.87 ? C6N NAD 401 D 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    45 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           44 
#