data_7Q7F
#
_model_server_result.job_id            mDWHBCR4XMeFeoJ6ZQ9TGw 
_model_server_result.datetime_utc      '2024-11-27 20:04:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7q7f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Z","auth_seq_id":412}' 
#
_entry.id    7Q7F 
#
_exptl.entry_id    7Q7F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          12 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7Q7F 
_cell.length_a            102.5 
_cell.length_b            102.5 
_cell.length_c            237.84 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Q7F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    'P 4n 2n' 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      12 
_struct_asym.id                             Z 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B NE2 HIS 190 L HIS 190 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc2 B NE2 HIS 230 L HIS 230 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? 
metalc ? metalc3 C NE2 HIS 219 M HIS 219 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? 
metalc ? metalc4 C OE1 GLU 234 M GLU 234 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc5 C OE2 GLU 234 M GLU 234 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? 
metalc ? metalc6 C NE2 HIS 266 M HIS 266 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 364 n n 
C1 O2 CIT sing 365 n n 
C1 C2 CIT sing 366 n n 
O2 HO2 CIT sing 367 n n 
C2 C3 CIT sing 368 n n 
C2 H21 CIT sing 369 n n 
C2 H22 CIT sing 370 n n 
C3 O7 CIT sing 371 n n 
C3 C4 CIT sing 372 n n 
C3 C6 CIT sing 373 n n 
O7 HO7 CIT sing 374 n n 
C4 C5 CIT sing 375 n n 
C4 H41 CIT sing 376 n n 
C4 H42 CIT sing 377 n n 
C5 O3 CIT doub 378 n n 
C5 O4 CIT sing 379 n n 
O4 HO4 CIT sing 380 n n 
C6 O5 CIT doub 381 n n 
C6 O6 CIT sing 382 n n 
O6 HO6 CIT sing 383 n n 
#
_atom_sites.entry_id                     7Q7F 
_atom_sites.fract_transf_matrix[1][1]    0.009756 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009756 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004205 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 LDA H 1 301 702 LDA LDA . 
E 4 LDA H 1 302 704 LDA LDA . 
F 4 LDA H 1 303 1008 LDA LDA . 
G 5 BPH L 1 301 301 BPH BPH . 
H 6 BCL L 1 302 302 BCL BCL . 
I 6 BCL L 1 303 303 BCL BCL . 
J 7 OLC L 1 305 1 OLC OLC . 
K 4 LDA L 1 306 1004 LDA LDA . 
L 4 LDA L 1 307 1005 LDA LDA . 
M 4 LDA L 1 308 1006 LDA LDA . 
N 5 BPH M 1 304 404 BPH BPH . 
O 8 UQ7 M 1 401 401 UQ7 U10 . 
P 6 BCL M 1 402 402 BCL BCL . 
Q 6 BCL M 1 403 403 BCL BCL . 
R 9 FE M 1 404 500 FE FE . 
S 4 LDA M 1 405 701 LDA LDA . 
T 4 LDA M 1 406 703 LDA LDA . 
U 10 PO4 M 1 407 800 PO4 PO4 . 
V 7 OLC M 1 408 2 OLC OLC . 
W 11 SPN M 1 409 3 SPN SPN . 
X 4 LDA M 1 410 1002 LDA LDA . 
Y 10 PO4 M 1 411 1 PO4 PO4 . 
Z 12 CIT M 1 412 1 CIT CIT . 
AA 13 CL M 1 413 1 CL CL . 
BA 14 HOH H 1 401 51 HOH HOH . 
BA 14 HOH H 2 402 157 HOH HOH . 
BA 14 HOH H 3 403 156 HOH HOH . 
BA 14 HOH H 4 404 100 HOH HOH . 
BA 14 HOH H 5 405 32 HOH HOH . 
BA 14 HOH H 6 406 203 HOH HOH . 
BA 14 HOH H 7 407 61 HOH HOH . 
BA 14 HOH H 8 408 54 HOH HOH . 
BA 14 HOH H 9 409 237 HOH HOH . 
BA 14 HOH H 10 410 29 HOH HOH . 
BA 14 HOH H 11 411 146 HOH HOH . 
BA 14 HOH H 12 412 43 HOH HOH . 
BA 14 HOH H 13 413 117 HOH HOH . 
BA 14 HOH H 14 414 249 HOH HOH . 
BA 14 HOH H 15 415 47 HOH HOH . 
BA 14 HOH H 16 416 235 HOH HOH . 
BA 14 HOH H 17 417 35 HOH HOH . 
BA 14 HOH H 18 418 2 HOH HOH . 
BA 14 HOH H 19 419 64 HOH HOH . 
BA 14 HOH H 20 420 38 HOH HOH . 
BA 14 HOH H 21 421 177 HOH HOH . 
BA 14 HOH H 22 422 229 HOH HOH . 
BA 14 HOH H 23 423 20 HOH HOH . 
BA 14 HOH H 24 424 158 HOH HOH . 
BA 14 HOH H 25 425 8 HOH HOH . 
BA 14 HOH H 26 426 84 HOH HOH . 
BA 14 HOH H 27 427 127 HOH HOH . 
BA 14 HOH H 28 428 148 HOH HOH . 
BA 14 HOH H 29 429 74 HOH HOH . 
BA 14 HOH H 30 430 109 HOH HOH . 
BA 14 HOH H 31 431 6 HOH HOH . 
BA 14 HOH H 32 432 170 HOH HOH . 
BA 14 HOH H 33 433 182 HOH HOH . 
BA 14 HOH H 34 434 101 HOH HOH . 
BA 14 HOH H 35 435 135 HOH HOH . 
BA 14 HOH H 36 436 162 HOH HOH . 
BA 14 HOH H 37 437 23 HOH HOH . 
BA 14 HOH H 38 438 121 HOH HOH . 
BA 14 HOH H 39 439 27 HOH HOH . 
BA 14 HOH H 40 440 33 HOH HOH . 
BA 14 HOH H 41 441 37 HOH HOH . 
BA 14 HOH H 42 442 78 HOH HOH . 
BA 14 HOH H 43 443 73 HOH HOH . 
BA 14 HOH H 44 444 41 HOH HOH . 
BA 14 HOH H 45 445 24 HOH HOH . 
BA 14 HOH H 46 446 264 HOH HOH . 
BA 14 HOH H 47 447 25 HOH HOH . 
BA 14 HOH H 48 448 175 HOH HOH . 
BA 14 HOH H 49 449 22 HOH HOH . 
BA 14 HOH H 50 450 242 HOH HOH . 
BA 14 HOH H 51 451 26 HOH HOH . 
BA 14 HOH H 52 452 145 HOH HOH . 
BA 14 HOH H 53 453 165 HOH HOH . 
BA 14 HOH H 54 454 232 HOH HOH . 
BA 14 HOH H 55 455 128 HOH HOH . 
BA 14 HOH H 56 456 228 HOH HOH . 
BA 14 HOH H 57 457 77 HOH HOH . 
BA 14 HOH H 58 458 224 HOH HOH . 
BA 14 HOH H 59 459 231 HOH HOH . 
BA 14 HOH H 60 460 253 HOH HOH . 
BA 14 HOH H 61 461 265 HOH HOH . 
CA 14 HOH L 1 401 62 HOH HOH . 
CA 14 HOH L 2 402 59 HOH HOH . 
CA 14 HOH L 3 403 60 HOH HOH . 
CA 14 HOH L 4 404 16 HOH HOH . 
CA 14 HOH L 5 405 28 HOH HOH . 
CA 14 HOH L 6 406 46 HOH HOH . 
CA 14 HOH L 7 407 45 HOH HOH . 
CA 14 HOH L 8 408 31 HOH HOH . 
CA 14 HOH L 9 409 42 HOH HOH . 
CA 14 HOH L 10 410 68 HOH HOH . 
CA 14 HOH L 11 411 9 HOH HOH . 
CA 14 HOH L 12 412 19 HOH HOH . 
CA 14 HOH L 13 413 90 HOH HOH . 
CA 14 HOH L 14 414 105 HOH HOH . 
CA 14 HOH L 15 415 130 HOH HOH . 
CA 14 HOH L 16 416 69 HOH HOH . 
CA 14 HOH L 17 417 116 HOH HOH . 
CA 14 HOH L 18 418 11 HOH HOH . 
CA 14 HOH L 19 419 166 HOH HOH . 
CA 14 HOH L 20 420 149 HOH HOH . 
CA 14 HOH L 21 421 40 HOH HOH . 
CA 14 HOH L 22 422 50 HOH HOH . 
CA 14 HOH L 23 423 58 HOH HOH . 
CA 14 HOH L 24 424 108 HOH HOH . 
CA 14 HOH L 25 425 52 HOH HOH . 
CA 14 HOH L 26 426 173 HOH HOH . 
CA 14 HOH L 27 427 65 HOH HOH . 
CA 14 HOH L 28 428 7 HOH HOH . 
CA 14 HOH L 29 429 225 HOH HOH . 
CA 14 HOH L 30 430 104 HOH HOH . 
CA 14 HOH L 31 431 80 HOH HOH . 
CA 14 HOH L 32 432 55 HOH HOH . 
CA 14 HOH L 33 433 267 HOH HOH . 
CA 14 HOH L 34 434 226 HOH HOH . 
CA 14 HOH L 35 435 88 HOH HOH . 
CA 14 HOH L 36 436 230 HOH HOH . 
CA 14 HOH L 37 437 70 HOH HOH . 
CA 14 HOH L 38 438 97 HOH HOH . 
CA 14 HOH L 39 439 164 HOH HOH . 
CA 14 HOH L 40 440 136 HOH HOH . 
CA 14 HOH L 41 441 119 HOH HOH . 
CA 14 HOH L 42 442 268 HOH HOH . 
CA 14 HOH L 43 443 270 HOH HOH . 
CA 14 HOH L 44 444 258 HOH HOH . 
CA 14 HOH L 45 445 241 HOH HOH . 
CA 14 HOH L 46 446 260 HOH HOH . 
CA 14 HOH L 47 447 243 HOH HOH . 
CA 14 HOH L 48 448 261 HOH HOH . 
CA 14 HOH L 49 449 256 HOH HOH . 
DA 14 HOH M 1 501 155 HOH HOH . 
DA 14 HOH M 2 502 244 HOH HOH . 
DA 14 HOH M 3 503 151 HOH HOH . 
DA 14 HOH M 4 504 142 HOH HOH . 
DA 14 HOH M 5 505 12 HOH HOH . 
DA 14 HOH M 6 506 17 HOH HOH . 
DA 14 HOH M 7 507 34 HOH HOH . 
DA 14 HOH M 8 508 5 HOH HOH . 
DA 14 HOH M 9 509 150 HOH HOH . 
DA 14 HOH M 10 510 56 HOH HOH . 
DA 14 HOH M 11 511 137 HOH HOH . 
DA 14 HOH M 12 512 30 HOH HOH . 
DA 14 HOH M 13 513 14 HOH HOH . 
DA 14 HOH M 14 514 57 HOH HOH . 
DA 14 HOH M 15 515 143 HOH HOH . 
DA 14 HOH M 16 516 15 HOH HOH . 
DA 14 HOH M 17 517 81 HOH HOH . 
DA 14 HOH M 18 518 53 HOH HOH . 
DA 14 HOH M 19 519 180 HOH HOH . 
DA 14 HOH M 20 520 185 HOH HOH . 
DA 14 HOH M 21 521 83 HOH HOH . 
DA 14 HOH M 22 522 91 HOH HOH . 
DA 14 HOH M 23 523 72 HOH HOH . 
DA 14 HOH M 24 524 227 HOH HOH . 
DA 14 HOH M 25 525 13 HOH HOH . 
DA 14 HOH M 26 526 75 HOH HOH . 
DA 14 HOH M 27 527 39 HOH HOH . 
DA 14 HOH M 28 528 4 HOH HOH . 
DA 14 HOH M 29 529 3 HOH HOH . 
DA 14 HOH M 30 530 163 HOH HOH . 
DA 14 HOH M 31 531 152 HOH HOH . 
DA 14 HOH M 32 532 221 HOH HOH . 
DA 14 HOH M 33 533 95 HOH HOH . 
DA 14 HOH M 34 534 123 HOH HOH . 
DA 14 HOH M 35 535 144 HOH HOH . 
DA 14 HOH M 36 536 172 HOH HOH . 
DA 14 HOH M 37 537 21 HOH HOH . 
DA 14 HOH M 38 538 86 HOH HOH . 
DA 14 HOH M 39 539 87 HOH HOH . 
DA 14 HOH M 40 540 49 HOH HOH . 
DA 14 HOH M 41 541 66 HOH HOH . 
DA 14 HOH M 42 542 141 HOH HOH . 
DA 14 HOH M 43 543 271 HOH HOH . 
DA 14 HOH M 44 544 272 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . Z 12 21.485 37.451 -41.258 1 100.92 ? C1 CIT 412 M 1 
HETATM 2 O O1 CIT . . . Z 12 22.223 38.264 -41.968 1 100.93 ? O1 CIT 412 M 1 
HETATM 3 O O2 CIT . . . Z 12 21.857 36.945 -40.219 1 100.43 ? O2 CIT 412 M 1 
HETATM 4 C C2 CIT . . . Z 12 20.128 37.194 -41.855 1 101.6 ? C2 CIT 412 M 1 
HETATM 5 C C3 CIT . . . Z 12 18.964 37.904 -41.149 1 101.88 ? C3 CIT 412 M 1 
HETATM 6 O O7 CIT . . . Z 12 17.73 37.444 -41.693 1 101.96 ? O7 CIT 412 M 1 
HETATM 7 C C4 CIT . . . Z 12 19.042 37.517 -39.666 1 102.04 ? C4 CIT 412 M 1 
HETATM 8 C C5 CIT . . . Z 12 17.76 37.704 -38.901 1 102.66 ? C5 CIT 412 M 1 
HETATM 9 O O3 CIT . . . Z 12 16.886 38.472 -39.249 1 103.58 ? O3 CIT 412 M 1 
HETATM 10 O O4 CIT . . . Z 12 17.681 36.96 -37.829 1 102.12 ? O4 CIT 412 M 1 
HETATM 11 C C6 CIT . . . Z 12 19.053 39.419 -41.332 1 101.79 ? C6 CIT 412 M 1 
HETATM 12 O O5 CIT . . . Z 12 20.111 40.011 -41.409 1 101.48 ? O5 CIT 412 M 1 
HETATM 13 O O6 CIT . . . Z 12 17.88 39.996 -41.402 1 101.77 ? O6 CIT 412 M 1 
HETATM 14 H H21 CIT . . . Z 12 20.133 37.482 -42.905 1 121.88 ? H21 CIT 412 M 1 
HETATM 15 H H22 CIT . . . Z 12 19.934 36.122 -41.867 1 121.88 ? H22 CIT 412 M 1 
HETATM 16 H HO7 CIT . . . Z 12 17.211 38.247 -41.961 1 122.31 ? HO7 CIT 412 M 1 
HETATM 17 H H41 CIT . . . Z 12 19.837 38.091 -39.192 1 122.4 ? H41 CIT 412 M 1 
HETATM 18 H H42 CIT . . . Z 12 19.367 36.481 -39.587 1 122.4 ? H42 CIT 412 M 1 
#
_model_server_stats.io_time_ms              40 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           18 
#