data_7Q7F # _model_server_result.job_id MFjx9CF9kVEPaxxGtvcP7g _model_server_result.datetime_utc '2024-11-13 07:15:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q7f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Z","auth_seq_id":412}' # _entry.id 7Q7F # _exptl.entry_id 7Q7F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 12 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Q7F _cell.length_a 102.5 _cell.length_b 102.5 _cell.length_c 237.84 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q7F _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall 'P 4n 2n' _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 12 _struct_asym.id Z _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 190 L HIS 190 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc2 B NE2 HIS 230 L HIS 230 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc3 C NE2 HIS 219 M HIS 219 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc4 C OE1 GLU 234 M GLU 234 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc5 C OE2 GLU 234 M GLU 234 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc6 C NE2 HIS 266 M HIS 266 1_555 R FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 364 n n C1 O2 CIT sing 365 n n C1 C2 CIT sing 366 n n O2 HO2 CIT sing 367 n n C2 C3 CIT sing 368 n n C2 H21 CIT sing 369 n n C2 H22 CIT sing 370 n n C3 O7 CIT sing 371 n n C3 C4 CIT sing 372 n n C3 C6 CIT sing 373 n n O7 HO7 CIT sing 374 n n C4 C5 CIT sing 375 n n C4 H41 CIT sing 376 n n C4 H42 CIT sing 377 n n C5 O3 CIT doub 378 n n C5 O4 CIT sing 379 n n O4 HO4 CIT sing 380 n n C6 O5 CIT doub 381 n n C6 O6 CIT sing 382 n n O6 HO6 CIT sing 383 n n # _atom_sites.entry_id 7Q7F _atom_sites.fract_transf_matrix[1][1] 0.009756 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009756 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004205 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 LDA H 1 301 702 LDA LDA . E 4 LDA H 1 302 704 LDA LDA . F 4 LDA H 1 303 1008 LDA LDA . G 5 BPH L 1 301 301 BPH BPH . H 6 BCL L 1 302 302 BCL BCL . I 6 BCL L 1 303 303 BCL BCL . J 7 OLC L 1 305 1 OLC OLC . K 4 LDA L 1 306 1004 LDA LDA . L 4 LDA L 1 307 1005 LDA LDA . M 4 LDA L 1 308 1006 LDA LDA . N 5 BPH M 1 304 404 BPH BPH . O 8 UQ7 M 1 401 401 UQ7 U10 . P 6 BCL M 1 402 402 BCL BCL . Q 6 BCL M 1 403 403 BCL BCL . R 9 FE M 1 404 500 FE FE . S 4 LDA M 1 405 701 LDA LDA . T 4 LDA M 1 406 703 LDA LDA . U 10 PO4 M 1 407 800 PO4 PO4 . V 7 OLC M 1 408 2 OLC OLC . W 11 SPN M 1 409 3 SPN SPN . X 4 LDA M 1 410 1002 LDA LDA . Y 10 PO4 M 1 411 1 PO4 PO4 . Z 12 CIT M 1 412 1 CIT CIT . AA 13 CL M 1 413 1 CL CL . BA 14 HOH H 1 401 51 HOH HOH . BA 14 HOH H 2 402 157 HOH HOH . BA 14 HOH H 3 403 156 HOH HOH . BA 14 HOH H 4 404 100 HOH HOH . BA 14 HOH H 5 405 32 HOH HOH . BA 14 HOH H 6 406 203 HOH HOH . BA 14 HOH H 7 407 61 HOH HOH . BA 14 HOH H 8 408 54 HOH HOH . BA 14 HOH H 9 409 237 HOH HOH . BA 14 HOH H 10 410 29 HOH HOH . BA 14 HOH H 11 411 146 HOH HOH . BA 14 HOH H 12 412 43 HOH HOH . BA 14 HOH H 13 413 117 HOH HOH . BA 14 HOH H 14 414 249 HOH HOH . BA 14 HOH H 15 415 47 HOH HOH . BA 14 HOH H 16 416 235 HOH HOH . BA 14 HOH H 17 417 35 HOH HOH . BA 14 HOH H 18 418 2 HOH HOH . BA 14 HOH H 19 419 64 HOH HOH . BA 14 HOH H 20 420 38 HOH HOH . BA 14 HOH H 21 421 177 HOH HOH . BA 14 HOH H 22 422 229 HOH HOH . BA 14 HOH H 23 423 20 HOH HOH . BA 14 HOH H 24 424 158 HOH HOH . BA 14 HOH H 25 425 8 HOH HOH . BA 14 HOH H 26 426 84 HOH HOH . BA 14 HOH H 27 427 127 HOH HOH . BA 14 HOH H 28 428 148 HOH HOH . BA 14 HOH H 29 429 74 HOH HOH . BA 14 HOH H 30 430 109 HOH HOH . BA 14 HOH H 31 431 6 HOH HOH . BA 14 HOH H 32 432 170 HOH HOH . BA 14 HOH H 33 433 182 HOH HOH . BA 14 HOH H 34 434 101 HOH HOH . BA 14 HOH H 35 435 135 HOH HOH . BA 14 HOH H 36 436 162 HOH HOH . BA 14 HOH H 37 437 23 HOH HOH . BA 14 HOH H 38 438 121 HOH HOH . BA 14 HOH H 39 439 27 HOH HOH . BA 14 HOH H 40 440 33 HOH HOH . BA 14 HOH H 41 441 37 HOH HOH . BA 14 HOH H 42 442 78 HOH HOH . BA 14 HOH H 43 443 73 HOH HOH . BA 14 HOH H 44 444 41 HOH HOH . BA 14 HOH H 45 445 24 HOH HOH . BA 14 HOH H 46 446 264 HOH HOH . BA 14 HOH H 47 447 25 HOH HOH . BA 14 HOH H 48 448 175 HOH HOH . BA 14 HOH H 49 449 22 HOH HOH . BA 14 HOH H 50 450 242 HOH HOH . BA 14 HOH H 51 451 26 HOH HOH . BA 14 HOH H 52 452 145 HOH HOH . BA 14 HOH H 53 453 165 HOH HOH . BA 14 HOH H 54 454 232 HOH HOH . BA 14 HOH H 55 455 128 HOH HOH . BA 14 HOH H 56 456 228 HOH HOH . BA 14 HOH H 57 457 77 HOH HOH . BA 14 HOH H 58 458 224 HOH HOH . BA 14 HOH H 59 459 231 HOH HOH . BA 14 HOH H 60 460 253 HOH HOH . BA 14 HOH H 61 461 265 HOH HOH . CA 14 HOH L 1 401 62 HOH HOH . CA 14 HOH L 2 402 59 HOH HOH . CA 14 HOH L 3 403 60 HOH HOH . CA 14 HOH L 4 404 16 HOH HOH . CA 14 HOH L 5 405 28 HOH HOH . CA 14 HOH L 6 406 46 HOH HOH . CA 14 HOH L 7 407 45 HOH HOH . CA 14 HOH L 8 408 31 HOH HOH . CA 14 HOH L 9 409 42 HOH HOH . CA 14 HOH L 10 410 68 HOH HOH . CA 14 HOH L 11 411 9 HOH HOH . CA 14 HOH L 12 412 19 HOH HOH . CA 14 HOH L 13 413 90 HOH HOH . CA 14 HOH L 14 414 105 HOH HOH . CA 14 HOH L 15 415 130 HOH HOH . CA 14 HOH L 16 416 69 HOH HOH . CA 14 HOH L 17 417 116 HOH HOH . CA 14 HOH L 18 418 11 HOH HOH . CA 14 HOH L 19 419 166 HOH HOH . CA 14 HOH L 20 420 149 HOH HOH . CA 14 HOH L 21 421 40 HOH HOH . CA 14 HOH L 22 422 50 HOH HOH . CA 14 HOH L 23 423 58 HOH HOH . CA 14 HOH L 24 424 108 HOH HOH . CA 14 HOH L 25 425 52 HOH HOH . CA 14 HOH L 26 426 173 HOH HOH . CA 14 HOH L 27 427 65 HOH HOH . CA 14 HOH L 28 428 7 HOH HOH . CA 14 HOH L 29 429 225 HOH HOH . CA 14 HOH L 30 430 104 HOH HOH . CA 14 HOH L 31 431 80 HOH HOH . CA 14 HOH L 32 432 55 HOH HOH . CA 14 HOH L 33 433 267 HOH HOH . CA 14 HOH L 34 434 226 HOH HOH . CA 14 HOH L 35 435 88 HOH HOH . CA 14 HOH L 36 436 230 HOH HOH . CA 14 HOH L 37 437 70 HOH HOH . CA 14 HOH L 38 438 97 HOH HOH . CA 14 HOH L 39 439 164 HOH HOH . CA 14 HOH L 40 440 136 HOH HOH . CA 14 HOH L 41 441 119 HOH HOH . CA 14 HOH L 42 442 268 HOH HOH . CA 14 HOH L 43 443 270 HOH HOH . CA 14 HOH L 44 444 258 HOH HOH . CA 14 HOH L 45 445 241 HOH HOH . CA 14 HOH L 46 446 260 HOH HOH . CA 14 HOH L 47 447 243 HOH HOH . CA 14 HOH L 48 448 261 HOH HOH . CA 14 HOH L 49 449 256 HOH HOH . DA 14 HOH M 1 501 155 HOH HOH . DA 14 HOH M 2 502 244 HOH HOH . DA 14 HOH M 3 503 151 HOH HOH . DA 14 HOH M 4 504 142 HOH HOH . DA 14 HOH M 5 505 12 HOH HOH . DA 14 HOH M 6 506 17 HOH HOH . DA 14 HOH M 7 507 34 HOH HOH . DA 14 HOH M 8 508 5 HOH HOH . DA 14 HOH M 9 509 150 HOH HOH . DA 14 HOH M 10 510 56 HOH HOH . DA 14 HOH M 11 511 137 HOH HOH . DA 14 HOH M 12 512 30 HOH HOH . DA 14 HOH M 13 513 14 HOH HOH . DA 14 HOH M 14 514 57 HOH HOH . DA 14 HOH M 15 515 143 HOH HOH . DA 14 HOH M 16 516 15 HOH HOH . DA 14 HOH M 17 517 81 HOH HOH . DA 14 HOH M 18 518 53 HOH HOH . DA 14 HOH M 19 519 180 HOH HOH . DA 14 HOH M 20 520 185 HOH HOH . DA 14 HOH M 21 521 83 HOH HOH . DA 14 HOH M 22 522 91 HOH HOH . DA 14 HOH M 23 523 72 HOH HOH . DA 14 HOH M 24 524 227 HOH HOH . DA 14 HOH M 25 525 13 HOH HOH . DA 14 HOH M 26 526 75 HOH HOH . DA 14 HOH M 27 527 39 HOH HOH . DA 14 HOH M 28 528 4 HOH HOH . DA 14 HOH M 29 529 3 HOH HOH . DA 14 HOH M 30 530 163 HOH HOH . DA 14 HOH M 31 531 152 HOH HOH . DA 14 HOH M 32 532 221 HOH HOH . DA 14 HOH M 33 533 95 HOH HOH . DA 14 HOH M 34 534 123 HOH HOH . DA 14 HOH M 35 535 144 HOH HOH . DA 14 HOH M 36 536 172 HOH HOH . DA 14 HOH M 37 537 21 HOH HOH . DA 14 HOH M 38 538 86 HOH HOH . DA 14 HOH M 39 539 87 HOH HOH . DA 14 HOH M 40 540 49 HOH HOH . DA 14 HOH M 41 541 66 HOH HOH . DA 14 HOH M 42 542 141 HOH HOH . DA 14 HOH M 43 543 271 HOH HOH . DA 14 HOH M 44 544 272 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . Z 12 21.485 37.451 -41.258 1 100.92 ? C1 CIT 412 M 1 HETATM 2 O O1 CIT . . . Z 12 22.223 38.264 -41.968 1 100.93 ? O1 CIT 412 M 1 HETATM 3 O O2 CIT . . . Z 12 21.857 36.945 -40.219 1 100.43 ? O2 CIT 412 M 1 HETATM 4 C C2 CIT . . . Z 12 20.128 37.194 -41.855 1 101.6 ? C2 CIT 412 M 1 HETATM 5 C C3 CIT . . . Z 12 18.964 37.904 -41.149 1 101.88 ? C3 CIT 412 M 1 HETATM 6 O O7 CIT . . . Z 12 17.73 37.444 -41.693 1 101.96 ? O7 CIT 412 M 1 HETATM 7 C C4 CIT . . . Z 12 19.042 37.517 -39.666 1 102.04 ? C4 CIT 412 M 1 HETATM 8 C C5 CIT . . . Z 12 17.76 37.704 -38.901 1 102.66 ? C5 CIT 412 M 1 HETATM 9 O O3 CIT . . . Z 12 16.886 38.472 -39.249 1 103.58 ? O3 CIT 412 M 1 HETATM 10 O O4 CIT . . . Z 12 17.681 36.96 -37.829 1 102.12 ? O4 CIT 412 M 1 HETATM 11 C C6 CIT . . . Z 12 19.053 39.419 -41.332 1 101.79 ? C6 CIT 412 M 1 HETATM 12 O O5 CIT . . . Z 12 20.111 40.011 -41.409 1 101.48 ? O5 CIT 412 M 1 HETATM 13 O O6 CIT . . . Z 12 17.88 39.996 -41.402 1 101.77 ? O6 CIT 412 M 1 HETATM 14 H H21 CIT . . . Z 12 20.133 37.482 -42.905 1 121.88 ? H21 CIT 412 M 1 HETATM 15 H H22 CIT . . . Z 12 19.934 36.122 -41.867 1 121.88 ? H22 CIT 412 M 1 HETATM 16 H HO7 CIT . . . Z 12 17.211 38.247 -41.961 1 122.31 ? HO7 CIT 412 M 1 HETATM 17 H H41 CIT . . . Z 12 19.837 38.091 -39.192 1 122.4 ? H41 CIT 412 M 1 HETATM 18 H H42 CIT . . . Z 12 19.367 36.481 -39.587 1 122.4 ? H42 CIT 412 M 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 18 #