data_7Q7G # _model_server_result.job_id qBQjCE7psH5zFWLtsye3wQ _model_server_result.datetime_utc '2024-11-24 03:36:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q7g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":412}' # _entry.id 7Q7G # _exptl.entry_id 7Q7G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 12 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Q7G _cell.length_a 102.44 _cell.length_b 102.44 _cell.length_c 238.16 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q7G _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall 'P 4n 2n' _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 12 _struct_asym.id X _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 190 L HIS 190 1_555 P FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc2 B NE2 HIS 230 L HIS 230 1_555 P FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc3 C NE2 HIS 219 M HIS 219 1_555 P FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc4 C OE1 GLU 234 M GLU 234 1_555 P FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc5 C OE2 GLU 234 M GLU 234 1_555 P FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc6 C NE2 HIS 266 M HIS 266 1_555 P FE FE . M FE 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 364 n n C1 O2 CIT sing 365 n n C1 C2 CIT sing 366 n n O2 HO2 CIT sing 367 n n C2 C3 CIT sing 368 n n C2 H21 CIT sing 369 n n C2 H22 CIT sing 370 n n C3 O7 CIT sing 371 n n C3 C4 CIT sing 372 n n C3 C6 CIT sing 373 n n O7 HO7 CIT sing 374 n n C4 C5 CIT sing 375 n n C4 H41 CIT sing 376 n n C4 H42 CIT sing 377 n n C5 O3 CIT doub 378 n n C5 O4 CIT sing 379 n n O4 HO4 CIT sing 380 n n C6 O5 CIT doub 381 n n C6 O6 CIT sing 382 n n O6 HO6 CIT sing 383 n n # _atom_sites.entry_id 7Q7G _atom_sites.fract_transf_matrix[1][1] 0.009762 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009762 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 LDA H 1 301 702 LDA LDA . E 5 BPH L 1 301 301 BPH BPH . F 6 BCL L 1 302 302 BCL BCL . G 6 BCL L 1 303 303 BCL BCL . H 7 OLC L 1 305 1 OLC OLC . I 4 LDA L 1 306 1004 LDA LDA . J 4 LDA L 1 307 1005 LDA LDA . K 4 LDA L 1 308 1006 LDA LDA . L 5 BPH M 1 304 404 BPH BPH . M 8 UQ7 M 1 401 401 UQ7 U10 . N 6 BCL M 1 402 402 BCL BCL . O 6 BCL M 1 403 403 BCL BCL . P 9 FE M 1 404 500 FE FE . Q 4 LDA M 1 405 701 LDA LDA . R 10 PO4 M 1 406 800 PO4 PO4 . S 7 OLC M 1 407 2 OLC OLC . T 11 SPN M 1 408 3 SPN SPN . U 4 LDA M 1 409 1002 LDA LDA . V 4 LDA M 1 410 1007 LDA LDA . W 10 PO4 M 1 411 1 PO4 PO4 . X 12 CIT M 1 412 1 CIT CIT . Y 13 CL M 1 413 1 CL CL . Z 14 HOH H 1 401 61 HOH HOH . Z 14 HOH H 2 402 237 HOH HOH . Z 14 HOH H 3 403 156 HOH HOH . Z 14 HOH H 4 404 51 HOH HOH . Z 14 HOH H 5 405 29 HOH HOH . Z 14 HOH H 6 406 161 HOH HOH . Z 14 HOH H 7 407 74 HOH HOH . Z 14 HOH H 8 408 100 HOH HOH . Z 14 HOH H 9 409 43 HOH HOH . Z 14 HOH H 10 410 35 HOH HOH . Z 14 HOH H 11 411 196 HOH HOH . Z 14 HOH H 12 412 203 HOH HOH . Z 14 HOH H 13 413 117 HOH HOH . Z 14 HOH H 14 414 54 HOH HOH . Z 14 HOH H 15 415 229 HOH HOH . Z 14 HOH H 16 416 33 HOH HOH . Z 14 HOH H 17 417 32 HOH HOH . Z 14 HOH H 18 418 38 HOH HOH . Z 14 HOH H 19 419 8 HOH HOH . Z 14 HOH H 20 420 109 HOH HOH . Z 14 HOH H 21 421 27 HOH HOH . Z 14 HOH H 22 422 20 HOH HOH . Z 14 HOH H 23 423 2 HOH HOH . Z 14 HOH H 24 424 47 HOH HOH . Z 14 HOH H 25 425 249 HOH HOH . Z 14 HOH H 26 426 6 HOH HOH . Z 14 HOH H 27 427 41 HOH HOH . Z 14 HOH H 28 428 37 HOH HOH . Z 14 HOH H 29 429 22 HOH HOH . Z 14 HOH H 30 430 121 HOH HOH . Z 14 HOH H 31 431 26 HOH HOH . Z 14 HOH H 32 432 146 HOH HOH . Z 14 HOH H 33 433 157 HOH HOH . Z 14 HOH H 34 434 182 HOH HOH . Z 14 HOH H 35 435 158 HOH HOH . Z 14 HOH H 36 436 23 HOH HOH . Z 14 HOH H 37 437 177 HOH HOH . Z 14 HOH H 38 438 53 HOH HOH . Z 14 HOH H 39 439 101 HOH HOH . Z 14 HOH H 40 440 85 HOH HOH . Z 14 HOH H 41 441 24 HOH HOH . Z 14 HOH H 42 442 87 HOH HOH . Z 14 HOH H 43 443 135 HOH HOH . Z 14 HOH H 44 444 145 HOH HOH . Z 14 HOH H 45 445 268 HOH HOH . Z 14 HOH H 46 446 273 HOH HOH . Z 14 HOH H 47 447 128 HOH HOH . Z 14 HOH H 48 448 25 HOH HOH . Z 14 HOH H 49 449 165 HOH HOH . Z 14 HOH H 50 450 264 HOH HOH . Z 14 HOH H 51 451 175 HOH HOH . Z 14 HOH H 52 452 93 HOH HOH . Z 14 HOH H 53 453 232 HOH HOH . Z 14 HOH H 54 454 179 HOH HOH . Z 14 HOH H 55 455 77 HOH HOH . Z 14 HOH H 56 456 231 HOH HOH . Z 14 HOH H 57 457 246 HOH HOH . AA 14 HOH L 1 401 275 HOH HOH . AA 14 HOH L 2 402 132 HOH HOH . AA 14 HOH L 3 403 68 HOH HOH . AA 14 HOH L 4 404 130 HOH HOH . AA 14 HOH L 5 405 46 HOH HOH . AA 14 HOH L 6 406 59 HOH HOH . AA 14 HOH L 7 407 19 HOH HOH . AA 14 HOH L 8 408 40 HOH HOH . AA 14 HOH L 9 409 52 HOH HOH . AA 14 HOH L 10 410 45 HOH HOH . AA 14 HOH L 11 411 60 HOH HOH . AA 14 HOH L 12 412 31 HOH HOH . AA 14 HOH L 13 413 108 HOH HOH . AA 14 HOH L 14 414 42 HOH HOH . AA 14 HOH L 15 415 11 HOH HOH . AA 14 HOH L 16 416 149 HOH HOH . AA 14 HOH L 17 417 199 HOH HOH . AA 14 HOH L 18 418 166 HOH HOH . AA 14 HOH L 19 419 16 HOH HOH . AA 14 HOH L 20 420 28 HOH HOH . AA 14 HOH L 21 421 9 HOH HOH . AA 14 HOH L 22 422 105 HOH HOH . AA 14 HOH L 23 423 70 HOH HOH . AA 14 HOH L 24 424 65 HOH HOH . AA 14 HOH L 25 425 50 HOH HOH . AA 14 HOH L 26 426 90 HOH HOH . AA 14 HOH L 27 427 7 HOH HOH . AA 14 HOH L 28 428 164 HOH HOH . AA 14 HOH L 29 429 55 HOH HOH . AA 14 HOH L 30 430 225 HOH HOH . AA 14 HOH L 31 431 88 HOH HOH . AA 14 HOH L 32 432 226 HOH HOH . AA 14 HOH L 33 433 270 HOH HOH . AA 14 HOH L 34 434 58 HOH HOH . AA 14 HOH L 35 435 144 HOH HOH . AA 14 HOH L 36 436 80 HOH HOH . AA 14 HOH L 37 437 245 HOH HOH . AA 14 HOH L 38 438 104 HOH HOH . AA 14 HOH L 39 439 119 HOH HOH . AA 14 HOH L 40 440 271 HOH HOH . AA 14 HOH L 41 441 261 HOH HOH . AA 14 HOH L 42 442 243 HOH HOH . AA 14 HOH L 43 443 256 HOH HOH . BA 14 HOH M 1 501 151 HOH HOH . BA 14 HOH M 2 502 195 HOH HOH . BA 14 HOH M 3 503 155 HOH HOH . BA 14 HOH M 4 504 12 HOH HOH . BA 14 HOH M 5 505 81 HOH HOH . BA 14 HOH M 6 506 142 HOH HOH . BA 14 HOH M 7 507 57 HOH HOH . BA 14 HOH M 8 508 34 HOH HOH . BA 14 HOH M 9 509 150 HOH HOH . BA 14 HOH M 10 510 30 HOH HOH . BA 14 HOH M 11 511 5 HOH HOH . BA 14 HOH M 12 512 244 HOH HOH . BA 14 HOH M 13 513 39 HOH HOH . BA 14 HOH M 14 514 227 HOH HOH . BA 14 HOH M 15 515 15 HOH HOH . BA 14 HOH M 16 516 56 HOH HOH . BA 14 HOH M 17 517 17 HOH HOH . BA 14 HOH M 18 518 14 HOH HOH . BA 14 HOH M 19 519 72 HOH HOH . BA 14 HOH M 20 520 95 HOH HOH . BA 14 HOH M 21 521 152 HOH HOH . BA 14 HOH M 22 522 78 HOH HOH . BA 14 HOH M 23 523 4 HOH HOH . BA 14 HOH M 24 524 173 HOH HOH . BA 14 HOH M 25 525 83 HOH HOH . BA 14 HOH M 26 526 143 HOH HOH . BA 14 HOH M 27 527 13 HOH HOH . BA 14 HOH M 28 528 76 HOH HOH . BA 14 HOH M 29 529 49 HOH HOH . BA 14 HOH M 30 530 160 HOH HOH . BA 14 HOH M 31 531 123 HOH HOH . BA 14 HOH M 32 532 91 HOH HOH . BA 14 HOH M 33 533 3 HOH HOH . BA 14 HOH M 34 534 242 HOH HOH . BA 14 HOH M 35 535 75 HOH HOH . BA 14 HOH M 36 536 153 HOH HOH . BA 14 HOH M 37 537 172 HOH HOH . BA 14 HOH M 38 538 247 HOH HOH . BA 14 HOH M 39 539 66 HOH HOH . BA 14 HOH M 40 540 107 HOH HOH . BA 14 HOH M 41 541 86 HOH HOH . BA 14 HOH M 42 542 21 HOH HOH . BA 14 HOH M 43 543 141 HOH HOH . BA 14 HOH M 44 544 272 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . X 12 21.542 37.367 -41.049 1 111.49 ? C1 CIT 412 M 1 HETATM 2 O O1 CIT . . . X 12 22.125 36.662 -40.254 1 111.11 ? O1 CIT 412 M 1 HETATM 3 O O2 CIT . . . X 12 22.067 38.447 -41.574 1 111.1 ? O2 CIT 412 M 1 HETATM 4 C C2 CIT . . . X 12 20.147 37.091 -41.553 1 112.6 ? C2 CIT 412 M 1 HETATM 5 C C3 CIT . . . X 12 19.045 37.963 -40.936 1 113.48 ? C3 CIT 412 M 1 HETATM 6 O O7 CIT . . . X 12 17.827 37.736 -41.639 1 113.62 ? O7 CIT 412 M 1 HETATM 7 C C4 CIT . . . X 12 18.869 37.567 -39.464 1 113.58 ? C4 CIT 412 M 1 HETATM 8 C C5 CIT . . . X 12 17.53 37.951 -38.882 1 113.98 ? C5 CIT 412 M 1 HETATM 9 O O3 CIT . . . X 12 17.015 37.367 -37.95 1 113.78 ? O3 CIT 412 M 1 HETATM 10 O O4 CIT . . . X 12 16.983 38.985 -39.474 1 114.25 ? O4 CIT 412 M 1 HETATM 11 C C6 CIT . . . X 12 19.42 39.44 -41.047 1 114.03 ? C6 CIT 412 M 1 HETATM 12 O O5 CIT . . . X 12 19.502 40.171 -40.079 1 114.1 ? O5 CIT 412 M 1 HETATM 13 O O6 CIT . . . X 12 19.638 39.822 -42.278 1 114.06 ? O6 CIT 412 M 1 HETATM 14 H HO2 CIT . . . X 12 22.984 38.613 -41.232 1 133.34 ? HO2 CIT 412 M 1 HETATM 15 H H21 CIT . . . X 12 20.124 37.207 -42.636 1 135.15 ? H21 CIT 412 M 1 HETATM 16 H H22 CIT . . . X 12 19.903 36.043 -41.386 1 135.15 ? H22 CIT 412 M 1 HETATM 17 H HO7 CIT . . . X 12 17.727 38.476 -42.294 1 136.37 ? HO7 CIT 412 M 1 HETATM 18 H H41 CIT . . . X 12 19.669 38.014 -38.876 1 136.32 ? H41 CIT 412 M 1 HETATM 19 H H42 CIT . . . X 12 19.02 36.493 -39.363 1 136.32 ? H42 CIT 412 M 1 HETATM 20 H HO4 CIT . . . X 12 16.104 39.217 -39.074 1 137.12 ? HO4 CIT 412 M 1 HETATM 21 H HO6 CIT . . . X 12 19.879 40.785 -42.316 1 136.89 ? HO6 CIT 412 M 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #