data_7Q8B # _model_server_result.job_id mNd4IyT6GkgXNhLZQPfZrQ _model_server_result.datetime_utc '2024-11-24 01:40:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q8b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":803}' # _entry.id 7Q8B # _exptl.entry_id 7Q8B _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Q8B _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q8B _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 K N N ? 4 N N N ? 4 Q N N ? 4 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 214 A LYS 213 1_555 G O2' ADP . A ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? covale ? covale2 B NZ LYS 214 B LYS 213 1_555 J O2' ADP . B ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.298 ? covale ? covale3 C NZ LYS 214 C LYS 213 1_555 M O2' ADP . C ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.298 ? covale ? covale4 D NZ LYS 214 D LYS 213 1_555 P O2' ADP . D ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? covale ? covale5 E NZ LYS 214 E LYS 213 1_555 S O2' ADP . E ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? metalc ? metalc1 F MG MG . A MG 801 1_555 G O2B ADP . A ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc2 F MG MG . A MG 801 1_555 H O4 PO4 . A PO4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc3 I MG MG . B MG 801 1_555 J O2B ADP . B ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc4 I MG MG . B MG 801 1_555 K O4 PO4 . B PO4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc5 L MG MG . C MG 801 1_555 M O2B ADP . C ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc6 L MG MG . C MG 801 1_555 N O4 PO4 . C PO4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc7 O MG MG . D MG 801 1_555 P O2B ADP . D ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc8 O MG MG . D MG 801 1_555 Q O4 PO4 . D PO4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc9 R MG MG . E MG 801 1_555 S O2B ADP . E ADP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc10 R MG MG . E MG 801 1_555 T O4 PO4 . E PO4 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7Q8B _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 MG A 1 801 801 MG MG . G 3 ADP A 1 802 802 ADP ADP . H 4 PO4 A 1 803 803 PO4 PO4 . I 2 MG B 1 801 801 MG MG . J 3 ADP B 1 802 802 ADP ADP . K 4 PO4 B 1 803 803 PO4 PO4 . L 2 MG C 1 801 801 MG MG . M 3 ADP C 1 802 802 ADP ADP . N 4 PO4 C 1 803 803 PO4 PO4 . O 2 MG D 1 801 801 MG MG . P 3 ADP D 1 802 802 ADP ADP . Q 4 PO4 D 1 803 803 PO4 PO4 . R 2 MG E 1 801 801 MG MG . S 3 ADP E 1 802 802 ADP ADP . T 4 PO4 E 1 803 803 PO4 PO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . Q 4 118.169 137.236 144.374 1 9.6 ? P PO4 803 D 1 HETATM 2 O O1 PO4 . . . Q 4 117.77 136.447 143.154 1 9.6 ? O1 PO4 803 D 1 HETATM 3 O O2 PO4 . . . Q 4 117.901 136.415 145.609 1 9.6 ? O2 PO4 803 D 1 HETATM 4 O O3 PO4 . . . Q 4 119.637 137.568 144.297 1 9.6 ? O3 PO4 803 D 1 HETATM 5 O O4 PO4 . . . Q 4 117.365 138.511 144.436 1 9.6 ? O4 PO4 803 D 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 239 _model_server_stats.query_time_ms 517 _model_server_stats.encode_time_ms 47 _model_server_stats.element_count 5 #