data_7Q9A
#
_model_server_result.job_id            Db8GUaOJDMVSqedkqibp9g 
_model_server_result.datetime_utc      '2024-11-02 07:18:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7q9a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":301}' 
#
_entry.id    7Q9A 
#
_exptl.entry_id    7Q9A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7Q9A 
_cell.length_a            122.019 
_cell.length_b            122.019 
_cell.length_c            82.418 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Q9A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 G N N 
? 6 H N N 
? 6 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf4 D SG CYS 22 D CYS 23 1_555 D SG CYS 88 D CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf5 D SG CYS 131 D CYS 132 1_555 D SG CYS 181 D CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
disulf ? disulf6 D SG CYS 156 D CYS 157 1_555 E SG CYS 171 E CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf7 E SG CYS 23 E CYS 23 1_555 E SG CYS 91 E CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
disulf ? disulf8 E SG CYS 145 E CYS 145 1_555 E SG CYS 210 E CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7Q9A 
_atom_sites.fract_transf_matrix[1][1]    0.008195 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008195 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012133 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 GOL A 1 301 1 GOL GOL . 
G 6 GOL A 1 302 2 GOL GOL . 
H 6 GOL D 1 301 4 GOL GOL . 
I 6 GOL E 1 301 3 GOL GOL . 
J 7 HOH A 1 401 169 HOH HOH . 
J 7 HOH A 2 402 37 HOH HOH . 
J 7 HOH A 3 403 194 HOH HOH . 
J 7 HOH A 4 404 149 HOH HOH . 
J 7 HOH A 5 405 136 HOH HOH . 
J 7 HOH A 6 406 76 HOH HOH . 
J 7 HOH A 7 407 128 HOH HOH . 
J 7 HOH A 8 408 160 HOH HOH . 
J 7 HOH A 9 409 212 HOH HOH . 
J 7 HOH A 10 410 79 HOH HOH . 
J 7 HOH A 11 411 101 HOH HOH . 
J 7 HOH A 12 412 12 HOH HOH . 
J 7 HOH A 13 413 67 HOH HOH . 
J 7 HOH A 14 414 228 HOH HOH . 
J 7 HOH A 15 415 189 HOH HOH . 
J 7 HOH A 16 416 159 HOH HOH . 
J 7 HOH A 17 417 2 HOH HOH . 
J 7 HOH A 18 418 96 HOH HOH . 
J 7 HOH A 19 419 112 HOH HOH . 
J 7 HOH A 20 420 193 HOH HOH . 
J 7 HOH A 21 421 218 HOH HOH . 
J 7 HOH A 22 422 130 HOH HOH . 
J 7 HOH A 23 423 22 HOH HOH . 
J 7 HOH A 24 424 114 HOH HOH . 
J 7 HOH A 25 425 49 HOH HOH . 
J 7 HOH A 26 426 46 HOH HOH . 
J 7 HOH A 27 427 3 HOH HOH . 
J 7 HOH A 28 428 64 HOH HOH . 
J 7 HOH A 29 429 125 HOH HOH . 
J 7 HOH A 30 430 53 HOH HOH . 
J 7 HOH A 31 431 133 HOH HOH . 
J 7 HOH A 32 432 48 HOH HOH . 
J 7 HOH A 33 433 216 HOH HOH . 
J 7 HOH A 34 434 141 HOH HOH . 
J 7 HOH A 35 435 180 HOH HOH . 
J 7 HOH A 36 436 11 HOH HOH . 
J 7 HOH A 37 437 206 HOH HOH . 
J 7 HOH A 38 438 29 HOH HOH . 
J 7 HOH A 39 439 84 HOH HOH . 
J 7 HOH A 40 440 86 HOH HOH . 
J 7 HOH A 41 441 24 HOH HOH . 
J 7 HOH A 42 442 184 HOH HOH . 
J 7 HOH A 43 443 26 HOH HOH . 
J 7 HOH A 44 444 109 HOH HOH . 
J 7 HOH A 45 445 44 HOH HOH . 
J 7 HOH A 46 446 214 HOH HOH . 
J 7 HOH A 47 447 138 HOH HOH . 
J 7 HOH A 48 448 78 HOH HOH . 
J 7 HOH A 49 449 164 HOH HOH . 
J 7 HOH A 50 450 21 HOH HOH . 
J 7 HOH A 51 451 85 HOH HOH . 
J 7 HOH A 52 452 183 HOH HOH . 
J 7 HOH A 53 453 14 HOH HOH . 
J 7 HOH A 54 454 219 HOH HOH . 
J 7 HOH A 55 455 205 HOH HOH . 
J 7 HOH A 56 456 190 HOH HOH . 
J 7 HOH A 57 457 97 HOH HOH . 
J 7 HOH A 58 458 134 HOH HOH . 
J 7 HOH A 59 459 45 HOH HOH . 
J 7 HOH A 60 460 32 HOH HOH . 
J 7 HOH A 61 461 69 HOH HOH . 
J 7 HOH A 62 462 111 HOH HOH . 
J 7 HOH A 63 463 36 HOH HOH . 
J 7 HOH A 64 464 82 HOH HOH . 
J 7 HOH A 65 465 178 HOH HOH . 
J 7 HOH A 66 466 73 HOH HOH . 
J 7 HOH A 67 467 71 HOH HOH . 
J 7 HOH A 68 468 148 HOH HOH . 
J 7 HOH A 69 469 197 HOH HOH . 
J 7 HOH A 70 470 38 HOH HOH . 
J 7 HOH A 71 471 107 HOH HOH . 
J 7 HOH A 72 472 119 HOH HOH . 
J 7 HOH A 73 473 177 HOH HOH . 
J 7 HOH A 74 474 104 HOH HOH . 
J 7 HOH A 75 475 56 HOH HOH . 
J 7 HOH A 76 476 124 HOH HOH . 
J 7 HOH A 77 477 196 HOH HOH . 
J 7 HOH A 78 478 42 HOH HOH . 
J 7 HOH A 79 479 222 HOH HOH . 
J 7 HOH A 80 480 126 HOH HOH . 
J 7 HOH A 81 481 118 HOH HOH . 
J 7 HOH A 82 482 123 HOH HOH . 
J 7 HOH A 83 483 70 HOH HOH . 
J 7 HOH A 84 484 103 HOH HOH . 
K 7 HOH B 1 101 139 HOH HOH . 
K 7 HOH B 2 102 54 HOH HOH . 
K 7 HOH B 3 103 170 HOH HOH . 
K 7 HOH B 4 104 161 HOH HOH . 
K 7 HOH B 5 105 137 HOH HOH . 
K 7 HOH B 6 106 47 HOH HOH . 
K 7 HOH B 7 107 43 HOH HOH . 
K 7 HOH B 8 108 1 HOH HOH . 
K 7 HOH B 9 109 98 HOH HOH . 
K 7 HOH B 10 110 173 HOH HOH . 
K 7 HOH B 11 111 188 HOH HOH . 
K 7 HOH B 12 112 162 HOH HOH . 
K 7 HOH B 13 113 131 HOH HOH . 
K 7 HOH B 14 114 165 HOH HOH . 
K 7 HOH B 15 115 52 HOH HOH . 
K 7 HOH B 16 116 66 HOH HOH . 
K 7 HOH B 17 117 50 HOH HOH . 
K 7 HOH B 18 118 174 HOH HOH . 
K 7 HOH B 19 119 191 HOH HOH . 
K 7 HOH B 20 120 186 HOH HOH . 
K 7 HOH B 21 121 89 HOH HOH . 
K 7 HOH B 22 122 81 HOH HOH . 
K 7 HOH B 23 123 211 HOH HOH . 
L 7 HOH C 1 101 129 HOH HOH . 
L 7 HOH C 2 102 61 HOH HOH . 
L 7 HOH C 3 103 39 HOH HOH . 
M 7 HOH D 1 401 213 HOH HOH . 
M 7 HOH D 2 402 200 HOH HOH . 
M 7 HOH D 3 403 199 HOH HOH . 
M 7 HOH D 4 404 176 HOH HOH . 
M 7 HOH D 5 405 203 HOH HOH . 
M 7 HOH D 6 406 127 HOH HOH . 
M 7 HOH D 7 407 135 HOH HOH . 
M 7 HOH D 8 408 227 HOH HOH . 
M 7 HOH D 9 409 202 HOH HOH . 
M 7 HOH D 10 410 41 HOH HOH . 
M 7 HOH D 11 411 204 HOH HOH . 
M 7 HOH D 12 412 140 HOH HOH . 
M 7 HOH D 13 413 57 HOH HOH . 
M 7 HOH D 14 414 166 HOH HOH . 
M 7 HOH D 15 415 207 HOH HOH . 
M 7 HOH D 16 416 221 HOH HOH . 
M 7 HOH D 17 417 16 HOH HOH . 
M 7 HOH D 18 418 40 HOH HOH . 
M 7 HOH D 19 419 51 HOH HOH . 
M 7 HOH D 20 420 59 HOH HOH . 
M 7 HOH D 21 421 115 HOH HOH . 
M 7 HOH D 22 422 88 HOH HOH . 
M 7 HOH D 23 423 152 HOH HOH . 
M 7 HOH D 24 424 215 HOH HOH . 
M 7 HOH D 25 425 7 HOH HOH . 
M 7 HOH D 26 426 145 HOH HOH . 
M 7 HOH D 27 427 31 HOH HOH . 
M 7 HOH D 28 428 33 HOH HOH . 
M 7 HOH D 29 429 210 HOH HOH . 
M 7 HOH D 30 430 60 HOH HOH . 
M 7 HOH D 31 431 15 HOH HOH . 
M 7 HOH D 32 432 9 HOH HOH . 
M 7 HOH D 33 433 172 HOH HOH . 
M 7 HOH D 34 434 65 HOH HOH . 
M 7 HOH D 35 435 91 HOH HOH . 
M 7 HOH D 36 436 171 HOH HOH . 
M 7 HOH D 37 437 223 HOH HOH . 
M 7 HOH D 38 438 100 HOH HOH . 
M 7 HOH D 39 439 220 HOH HOH . 
M 7 HOH D 40 440 94 HOH HOH . 
M 7 HOH D 41 441 6 HOH HOH . 
M 7 HOH D 42 442 10 HOH HOH . 
M 7 HOH D 43 443 90 HOH HOH . 
M 7 HOH D 44 444 27 HOH HOH . 
M 7 HOH D 45 445 154 HOH HOH . 
M 7 HOH D 46 446 226 HOH HOH . 
M 7 HOH D 47 447 143 HOH HOH . 
M 7 HOH D 48 448 150 HOH HOH . 
M 7 HOH D 49 449 146 HOH HOH . 
M 7 HOH D 50 450 147 HOH HOH . 
M 7 HOH D 51 451 95 HOH HOH . 
N 7 HOH E 1 401 62 HOH HOH . 
N 7 HOH E 2 402 105 HOH HOH . 
N 7 HOH E 3 403 74 HOH HOH . 
N 7 HOH E 4 404 181 HOH HOH . 
N 7 HOH E 5 405 132 HOH HOH . 
N 7 HOH E 6 406 113 HOH HOH . 
N 7 HOH E 7 407 208 HOH HOH . 
N 7 HOH E 8 408 5 HOH HOH . 
N 7 HOH E 9 409 20 HOH HOH . 
N 7 HOH E 10 410 217 HOH HOH . 
N 7 HOH E 11 411 106 HOH HOH . 
N 7 HOH E 12 412 144 HOH HOH . 
N 7 HOH E 13 413 120 HOH HOH . 
N 7 HOH E 14 414 209 HOH HOH . 
N 7 HOH E 15 415 108 HOH HOH . 
N 7 HOH E 16 416 182 HOH HOH . 
N 7 HOH E 17 417 225 HOH HOH . 
N 7 HOH E 18 418 121 HOH HOH . 
N 7 HOH E 19 419 30 HOH HOH . 
N 7 HOH E 20 420 8 HOH HOH . 
N 7 HOH E 21 421 77 HOH HOH . 
N 7 HOH E 22 422 168 HOH HOH . 
N 7 HOH E 23 423 142 HOH HOH . 
N 7 HOH E 24 424 75 HOH HOH . 
N 7 HOH E 25 425 116 HOH HOH . 
N 7 HOH E 26 426 155 HOH HOH . 
N 7 HOH E 27 427 92 HOH HOH . 
N 7 HOH E 28 428 34 HOH HOH . 
N 7 HOH E 29 429 4 HOH HOH . 
N 7 HOH E 30 430 28 HOH HOH . 
N 7 HOH E 31 431 68 HOH HOH . 
N 7 HOH E 32 432 163 HOH HOH . 
N 7 HOH E 33 433 117 HOH HOH . 
N 7 HOH E 34 434 195 HOH HOH . 
N 7 HOH E 35 435 72 HOH HOH . 
N 7 HOH E 36 436 83 HOH HOH . 
N 7 HOH E 37 437 25 HOH HOH . 
N 7 HOH E 38 438 63 HOH HOH . 
N 7 HOH E 39 439 187 HOH HOH . 
N 7 HOH E 40 440 201 HOH HOH . 
N 7 HOH E 41 441 55 HOH HOH . 
N 7 HOH E 42 442 167 HOH HOH . 
N 7 HOH E 43 443 18 HOH HOH . 
N 7 HOH E 44 444 99 HOH HOH . 
N 7 HOH E 45 445 157 HOH HOH . 
N 7 HOH E 46 446 192 HOH HOH . 
N 7 HOH E 47 447 185 HOH HOH . 
N 7 HOH E 48 448 224 HOH HOH . 
N 7 HOH E 49 449 23 HOH HOH . 
N 7 HOH E 50 450 151 HOH HOH . 
N 7 HOH E 51 451 156 HOH HOH . 
N 7 HOH E 52 452 80 HOH HOH . 
N 7 HOH E 53 453 35 HOH HOH . 
N 7 HOH E 54 454 175 HOH HOH . 
N 7 HOH E 55 455 58 HOH HOH . 
N 7 HOH E 56 456 179 HOH HOH . 
N 7 HOH E 57 457 153 HOH HOH . 
N 7 HOH E 58 458 19 HOH HOH . 
N 7 HOH E 59 459 158 HOH HOH . 
N 7 HOH E 60 460 13 HOH HOH . 
N 7 HOH E 61 461 87 HOH HOH . 
N 7 HOH E 62 462 93 HOH HOH . 
N 7 HOH E 63 463 198 HOH HOH . 
N 7 HOH E 64 464 110 HOH HOH . 
N 7 HOH E 65 465 102 HOH HOH . 
N 7 HOH E 66 466 17 HOH HOH . 
N 7 HOH E 67 467 122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 6 41.524 11.735 -11.243 1 88.52 ? C1 GOL 301 D 1 
HETATM 2 O O1 GOL . . . H 6 42.558 10.794 -11.537 1 77.24 ? O1 GOL 301 D 1 
HETATM 3 C C2 GOL . . . H 6 41.817 13.125 -11.789 1 83.45 ? C2 GOL 301 D 1 
HETATM 4 O O2 GOL . . . H 6 42.07 13.051 -13.186 1 80.73 ? O2 GOL 301 D 1 
HETATM 5 C C3 GOL . . . H 6 40.712 14.138 -11.565 1 79.96 ? C3 GOL 301 D 1 
HETATM 6 O O3 GOL . . . H 6 39.572 13.54 -10.956 1 79.61 ? O3 GOL 301 D 1 
#
_model_server_stats.io_time_ms              34 
_model_server_stats.parse_time_ms           39 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#