data_7Q9O
#
_model_server_result.job_id            Zv72yXu-j7EB4YyKkTSsWQ 
_model_server_result.datetime_utc      '2024-11-23 01:41:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7q9o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    7Q9O 
#
_exptl.entry_id    7Q9O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7Q9O 
_cell.length_a            43.068 
_cell.length_b            64.304 
_cell.length_c            85.293 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Q9O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 43.068 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B O ASP 91 B ASP 99 1_555 F NA NA . B NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc2 F NA NA . B NA 202 1_555 H O HOH . B HOH 309 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc3 F NA NA . B NA 202 1_555 H O HOH . B HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? 
metalc ? metalc4 F NA NA . B NA 202 1_555 H O HOH . B HOH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? 
metalc ? metalc5 F NA NA . B NA 202 1_555 H O HOH . B HOH 376 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? 
metalc ? metalc6 F NA NA . B NA 202 1_555 H O HOH . B HOH 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 110 n n 
C1 C2 GOL sing 111 n n 
C1 H11 GOL sing 112 n n 
C1 H12 GOL sing 113 n n 
O1 HO1 GOL sing 114 n n 
C2 O2 GOL sing 115 n n 
C2 C3 GOL sing 116 n n 
C2 H2 GOL sing 117 n n 
O2 HO2 GOL sing 118 n n 
C3 O3 GOL sing 119 n n 
C3 H31 GOL sing 120 n n 
C3 H32 GOL sing 121 n n 
O3 HO3 GOL sing 122 n n 
#
_atom_sites.entry_id                     7Q9O 
_atom_sites.fract_transf_matrix[1][1]    0.023219 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015551 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011724 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 STL A 1 201 1 STL STL . 
D 3 GOL A 1 202 2 GOL GOL . 
E 2 STL B 1 201 2 STL STL . 
F 4 NA B 1 202 1 NA NA . 
G 5 HOH A 1 301 145 HOH HOH . 
G 5 HOH A 2 302 172 HOH HOH . 
G 5 HOH A 3 303 86 HOH HOH . 
G 5 HOH A 4 304 24 HOH HOH . 
G 5 HOH A 5 305 16 HOH HOH . 
G 5 HOH A 6 306 87 HOH HOH . 
G 5 HOH A 7 307 167 HOH HOH . 
G 5 HOH A 8 308 91 HOH HOH . 
G 5 HOH A 9 309 128 HOH HOH . 
G 5 HOH A 10 310 49 HOH HOH . 
G 5 HOH A 11 311 88 HOH HOH . 
G 5 HOH A 12 312 168 HOH HOH . 
G 5 HOH A 13 313 85 HOH HOH . 
G 5 HOH A 14 314 80 HOH HOH . 
G 5 HOH A 15 315 138 HOH HOH . 
G 5 HOH A 16 316 2 HOH HOH . 
G 5 HOH A 17 317 70 HOH HOH . 
G 5 HOH A 18 318 29 HOH HOH . 
G 5 HOH A 19 319 3 HOH HOH . 
G 5 HOH A 20 320 175 HOH HOH . 
G 5 HOH A 21 321 161 HOH HOH . 
G 5 HOH A 22 322 10 HOH HOH . 
G 5 HOH A 23 323 36 HOH HOH . 
G 5 HOH A 24 324 131 HOH HOH . 
G 5 HOH A 25 325 97 HOH HOH . 
G 5 HOH A 26 326 78 HOH HOH . 
G 5 HOH A 27 327 47 HOH HOH . 
G 5 HOH A 28 328 73 HOH HOH . 
G 5 HOH A 29 329 89 HOH HOH . 
G 5 HOH A 30 330 82 HOH HOH . 
G 5 HOH A 31 331 183 HOH HOH . 
G 5 HOH A 32 332 146 HOH HOH . 
G 5 HOH A 33 333 11 HOH HOH . 
G 5 HOH A 34 334 178 HOH HOH . 
G 5 HOH A 35 335 7 HOH HOH . 
G 5 HOH A 36 336 170 HOH HOH . 
G 5 HOH A 37 337 84 HOH HOH . 
G 5 HOH A 38 338 17 HOH HOH . 
G 5 HOH A 39 339 143 HOH HOH . 
G 5 HOH A 40 340 169 HOH HOH . 
G 5 HOH A 41 341 38 HOH HOH . 
G 5 HOH A 42 342 37 HOH HOH . 
G 5 HOH A 43 343 83 HOH HOH . 
G 5 HOH A 44 344 63 HOH HOH . 
G 5 HOH A 45 345 98 HOH HOH . 
G 5 HOH A 46 346 6 HOH HOH . 
G 5 HOH A 47 347 93 HOH HOH . 
G 5 HOH A 48 348 159 HOH HOH . 
G 5 HOH A 49 349 45 HOH HOH . 
G 5 HOH A 50 350 176 HOH HOH . 
G 5 HOH A 51 351 81 HOH HOH . 
G 5 HOH A 52 352 40 HOH HOH . 
G 5 HOH A 53 353 193 HOH HOH . 
G 5 HOH A 54 354 152 HOH HOH . 
G 5 HOH A 55 355 171 HOH HOH . 
G 5 HOH A 56 356 34 HOH HOH . 
G 5 HOH A 57 357 14 HOH HOH . 
G 5 HOH A 58 358 19 HOH HOH . 
G 5 HOH A 59 359 46 HOH HOH . 
G 5 HOH A 60 360 27 HOH HOH . 
G 5 HOH A 61 361 130 HOH HOH . 
G 5 HOH A 62 362 144 HOH HOH . 
G 5 HOH A 63 363 90 HOH HOH . 
G 5 HOH A 64 364 71 HOH HOH . 
G 5 HOH A 65 365 154 HOH HOH . 
G 5 HOH A 66 366 160 HOH HOH . 
G 5 HOH A 67 367 157 HOH HOH . 
G 5 HOH A 68 368 166 HOH HOH . 
G 5 HOH A 69 369 190 HOH HOH . 
G 5 HOH A 70 370 174 HOH HOH . 
G 5 HOH A 71 371 153 HOH HOH . 
G 5 HOH A 72 372 123 HOH HOH . 
G 5 HOH A 73 373 51 HOH HOH . 
G 5 HOH A 74 374 141 HOH HOH . 
G 5 HOH A 75 375 13 HOH HOH . 
G 5 HOH A 76 376 189 HOH HOH . 
G 5 HOH A 77 377 158 HOH HOH . 
G 5 HOH A 78 378 173 HOH HOH . 
G 5 HOH A 79 379 72 HOH HOH . 
G 5 HOH A 80 380 59 HOH HOH . 
G 5 HOH A 81 381 151 HOH HOH . 
G 5 HOH A 82 382 96 HOH HOH . 
G 5 HOH A 83 383 53 HOH HOH . 
G 5 HOH A 84 384 136 HOH HOH . 
G 5 HOH A 85 385 179 HOH HOH . 
G 5 HOH A 86 386 52 HOH HOH . 
G 5 HOH A 87 387 74 HOH HOH . 
G 5 HOH A 88 388 92 HOH HOH . 
G 5 HOH A 89 389 147 HOH HOH . 
G 5 HOH A 90 390 127 HOH HOH . 
G 5 HOH A 91 391 56 HOH HOH . 
G 5 HOH A 92 392 134 HOH HOH . 
G 5 HOH A 93 393 129 HOH HOH . 
G 5 HOH A 94 394 48 HOH HOH . 
G 5 HOH A 95 395 148 HOH HOH . 
H 5 HOH B 1 301 137 HOH HOH . 
H 5 HOH B 2 302 122 HOH HOH . 
H 5 HOH B 3 303 164 HOH HOH . 
H 5 HOH B 4 304 79 HOH HOH . 
H 5 HOH B 5 305 182 HOH HOH . 
H 5 HOH B 6 306 20 HOH HOH . 
H 5 HOH B 7 307 194 HOH HOH . 
H 5 HOH B 8 308 150 HOH HOH . 
H 5 HOH B 9 309 108 HOH HOH . 
H 5 HOH B 10 310 105 HOH HOH . 
H 5 HOH B 11 311 102 HOH HOH . 
H 5 HOH B 12 312 25 HOH HOH . 
H 5 HOH B 13 313 101 HOH HOH . 
H 5 HOH B 14 314 31 HOH HOH . 
H 5 HOH B 15 315 35 HOH HOH . 
H 5 HOH B 16 316 119 HOH HOH . 
H 5 HOH B 17 317 114 HOH HOH . 
H 5 HOH B 18 318 180 HOH HOH . 
H 5 HOH B 19 319 186 HOH HOH . 
H 5 HOH B 20 320 126 HOH HOH . 
H 5 HOH B 21 321 133 HOH HOH . 
H 5 HOH B 22 322 28 HOH HOH . 
H 5 HOH B 23 323 30 HOH HOH . 
H 5 HOH B 24 324 62 HOH HOH . 
H 5 HOH B 25 325 1 HOH HOH . 
H 5 HOH B 26 326 181 HOH HOH . 
H 5 HOH B 27 327 41 HOH HOH . 
H 5 HOH B 28 328 75 HOH HOH . 
H 5 HOH B 29 329 15 HOH HOH . 
H 5 HOH B 30 330 95 HOH HOH . 
H 5 HOH B 31 331 5 HOH HOH . 
H 5 HOH B 32 332 94 HOH HOH . 
H 5 HOH B 33 333 66 HOH HOH . 
H 5 HOH B 34 334 155 HOH HOH . 
H 5 HOH B 35 335 109 HOH HOH . 
H 5 HOH B 36 336 23 HOH HOH . 
H 5 HOH B 37 337 184 HOH HOH . 
H 5 HOH B 38 338 162 HOH HOH . 
H 5 HOH B 39 339 140 HOH HOH . 
H 5 HOH B 40 340 106 HOH HOH . 
H 5 HOH B 41 341 8 HOH HOH . 
H 5 HOH B 42 342 39 HOH HOH . 
H 5 HOH B 43 343 4 HOH HOH . 
H 5 HOH B 44 344 125 HOH HOH . 
H 5 HOH B 45 345 33 HOH HOH . 
H 5 HOH B 46 346 68 HOH HOH . 
H 5 HOH B 47 347 61 HOH HOH . 
H 5 HOH B 48 348 124 HOH HOH . 
H 5 HOH B 49 349 107 HOH HOH . 
H 5 HOH B 50 350 67 HOH HOH . 
H 5 HOH B 51 351 54 HOH HOH . 
H 5 HOH B 52 352 50 HOH HOH . 
H 5 HOH B 53 353 9 HOH HOH . 
H 5 HOH B 54 354 58 HOH HOH . 
H 5 HOH B 55 355 103 HOH HOH . 
H 5 HOH B 56 356 117 HOH HOH . 
H 5 HOH B 57 357 21 HOH HOH . 
H 5 HOH B 58 358 187 HOH HOH . 
H 5 HOH B 59 359 43 HOH HOH . 
H 5 HOH B 60 360 156 HOH HOH . 
H 5 HOH B 61 361 12 HOH HOH . 
H 5 HOH B 62 362 55 HOH HOH . 
H 5 HOH B 63 363 18 HOH HOH . 
H 5 HOH B 64 364 165 HOH HOH . 
H 5 HOH B 65 365 118 HOH HOH . 
H 5 HOH B 66 366 32 HOH HOH . 
H 5 HOH B 67 367 139 HOH HOH . 
H 5 HOH B 68 368 65 HOH HOH . 
H 5 HOH B 69 369 188 HOH HOH . 
H 5 HOH B 70 370 142 HOH HOH . 
H 5 HOH B 71 371 113 HOH HOH . 
H 5 HOH B 72 372 116 HOH HOH . 
H 5 HOH B 73 373 112 HOH HOH . 
H 5 HOH B 74 374 22 HOH HOH . 
H 5 HOH B 75 375 110 HOH HOH . 
H 5 HOH B 76 376 104 HOH HOH . 
H 5 HOH B 77 377 115 HOH HOH . 
H 5 HOH B 78 378 132 HOH HOH . 
H 5 HOH B 79 379 26 HOH HOH . 
H 5 HOH B 80 380 121 HOH HOH . 
H 5 HOH B 81 381 100 HOH HOH . 
H 5 HOH B 82 382 111 HOH HOH . 
H 5 HOH B 83 383 60 HOH HOH . 
H 5 HOH B 84 384 42 HOH HOH . 
H 5 HOH B 85 385 120 HOH HOH . 
H 5 HOH B 86 386 77 HOH HOH . 
H 5 HOH B 87 387 76 HOH HOH . 
H 5 HOH B 88 388 57 HOH HOH . 
H 5 HOH B 89 389 99 HOH HOH . 
H 5 HOH B 90 390 69 HOH HOH . 
H 5 HOH B 91 391 191 HOH HOH . 
H 5 HOH B 92 392 177 HOH HOH . 
H 5 HOH B 93 393 149 HOH HOH . 
H 5 HOH B 94 394 135 HOH HOH . 
H 5 HOH B 95 395 192 HOH HOH . 
H 5 HOH B 96 396 163 HOH HOH . 
H 5 HOH B 97 397 64 HOH HOH . 
H 5 HOH B 98 398 185 HOH HOH . 
H 5 HOH B 99 399 44 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . A . D 3 17.566 -16.004 0.108 0.5 34.57 ? C1 GOL 202 A 1 
HETATM 2 C C1 GOL . B . D 3 25.379 -16.862 0.079 0.5 29.89 ? C1 GOL 202 A 1 
HETATM 3 O O1 GOL . A . D 3 16.574 -16.943 -0.32 0.5 41.04 ? O1 GOL 202 A 1 
HETATM 4 O O1 GOL . B . D 3 24.245 -16.221 -0.506 0.5 44.32 ? O1 GOL 202 A 1 
HETATM 5 C C2 GOL . A . D 3 17.536 -15.79 1.607 0.5 30.58 ? C2 GOL 202 A 1 
HETATM 6 C C2 GOL . B . D 3 26.108 -15.937 1.021 0.5 29.8 ? C2 GOL 202 A 1 
HETATM 7 O O2 GOL . A . D 3 18.285 -16.81 2.27 0.5 28.6 ? O2 GOL 202 A 1 
HETATM 8 O O2 GOL . B . D 3 25.189 -15.296 1.902 0.5 29.77 ? O2 GOL 202 A 1 
HETATM 9 C C3 GOL . A . D 3 16.137 -15.79 2.166 0.5 25.46 ? C3 GOL 202 A 1 
HETATM 10 C C3 GOL . B . D 3 27.161 -16.681 1.79 0.5 25.35 ? C3 GOL 202 A 1 
HETATM 11 O O3 GOL . A . D 3 15.502 -14.557 1.956 0.5 23.77 ? O3 GOL 202 A 1 
HETATM 12 O O3 GOL . B . D 3 27.874 -17.502 0.909 0.5 25.82 ? O3 GOL 202 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           12 
#