data_7Q9S # _model_server_result.job_id o86LBMPwotv04f4G5IhFiw _model_server_result.datetime_utc '2024-11-13 17:01:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7q9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":205}' # _entry.id 7Q9S # _exptl.entry_id 7Q9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7Q9S _cell.length_a 77.104 _cell.length_b 81.123 _cell.length_c 118.514 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7Q9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,Q,R,U 1 1 B,C,K,L,M,N,O,P,S,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 N N N ? 5 O N N ? 5 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE ARG 61 BBB ARG 61 1_555 E C4 9TI . BBB 9TI 201 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.367 ? covale ? covale2 A NE ARG 61 BBB ARG 61 1_555 E C7 9TI . BBB 9TI 201 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.519 ? covale ? covale3 A CZ ARG 61 BBB ARG 61 1_555 E C5 9TI . BBB 9TI 201 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale4 A NH1 ARG 61 BBB ARG 61 1_555 E C2 9TI . BBB 9TI 201 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.359 ? covale ? covale5 L C1 FAR . AAA FAR 202 1_555 C SG CMT 13 CCC CMT 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.629 ? covale ? covale6 C C LYS 12 CCC LYS 23 1_555 C N CMT 13 CCC CMT 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.275 ? covale ? covale7 D C LYS 12 DDD LYS 4 1_555 D N CMT 13 DDD CMT 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.283 ? covale ? covale8 D SG CMT 13 DDD CMT 6 1_555 Q C1 FAR . DDD FAR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.621 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 135 n n C1 C2 EDO sing 136 n n C1 H11 EDO sing 137 n n C1 H12 EDO sing 138 n n O1 HO1 EDO sing 139 n n C2 O2 EDO sing 140 n n C2 H21 EDO sing 141 n n C2 H22 EDO sing 142 n n O2 HO2 EDO sing 143 n n # _atom_sites.entry_id 7Q9S _atom_sites.fract_transf_matrix[1][1] 0.012969 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012327 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008438 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 9TI BBB 1 201 201 9TI 241 . F 4 SO4 BBB 1 202 6 SO4 SO4 . G 5 EDO BBB 1 203 10 EDO EDO . H 5 EDO BBB 1 204 15 EDO EDO . I 5 EDO BBB 1 205 20 EDO EDO . J 5 EDO BBB 1 206 25 EDO EDO . K 6 DMS AAA 1 201 101 DMS DMS . L 7 FAR AAA 1 202 2 FAR FAR . M 3 9TI AAA 1 203 3 9TI 241 . N 5 EDO AAA 1 204 5 EDO EDO . O 5 EDO AAA 1 205 7 EDO EDO . P 5 EDO AAA 1 206 10 EDO EDO . Q 7 FAR DDD 1 101 2 FAR FAR . R 8 HOH BBB 1 301 173 HOH HOH . R 8 HOH BBB 2 302 100 HOH HOH . R 8 HOH BBB 3 303 223 HOH HOH . R 8 HOH BBB 4 304 176 HOH HOH . R 8 HOH BBB 5 305 89 HOH HOH . R 8 HOH BBB 6 306 188 HOH HOH . R 8 HOH BBB 7 307 113 HOH HOH . R 8 HOH BBB 8 308 205 HOH HOH . R 8 HOH BBB 9 309 199 HOH HOH . R 8 HOH BBB 10 310 116 HOH HOH . R 8 HOH BBB 11 311 120 HOH HOH . R 8 HOH BBB 12 312 76 HOH HOH . R 8 HOH BBB 13 313 91 HOH HOH . R 8 HOH BBB 14 314 195 HOH HOH . R 8 HOH BBB 15 315 12 HOH HOH . R 8 HOH BBB 16 316 128 HOH HOH . R 8 HOH BBB 17 317 54 HOH HOH . R 8 HOH BBB 18 318 202 HOH HOH . R 8 HOH BBB 19 319 93 HOH HOH . R 8 HOH BBB 20 320 203 HOH HOH . R 8 HOH BBB 21 321 108 HOH HOH . R 8 HOH BBB 22 322 153 HOH HOH . R 8 HOH BBB 23 323 71 HOH HOH . R 8 HOH BBB 24 324 185 HOH HOH . R 8 HOH BBB 25 325 63 HOH HOH . R 8 HOH BBB 26 326 167 HOH HOH . R 8 HOH BBB 27 327 134 HOH HOH . R 8 HOH BBB 28 328 218 HOH HOH . R 8 HOH BBB 29 329 22 HOH HOH . R 8 HOH BBB 30 330 131 HOH HOH . R 8 HOH BBB 31 331 150 HOH HOH . R 8 HOH BBB 32 332 3 HOH HOH . R 8 HOH BBB 33 333 215 HOH HOH . R 8 HOH BBB 34 334 156 HOH HOH . R 8 HOH BBB 35 335 86 HOH HOH . R 8 HOH BBB 36 336 8 HOH HOH . R 8 HOH BBB 37 337 217 HOH HOH . R 8 HOH BBB 38 338 115 HOH HOH . R 8 HOH BBB 39 339 206 HOH HOH . R 8 HOH BBB 40 340 192 HOH HOH . R 8 HOH BBB 41 341 122 HOH HOH . R 8 HOH BBB 42 342 53 HOH HOH . R 8 HOH BBB 43 343 231 HOH HOH . R 8 HOH BBB 44 344 4 HOH HOH . R 8 HOH BBB 45 345 73 HOH HOH . R 8 HOH BBB 46 346 196 HOH HOH . R 8 HOH BBB 47 347 211 HOH HOH . R 8 HOH BBB 48 348 214 HOH HOH . R 8 HOH BBB 49 349 143 HOH HOH . R 8 HOH BBB 50 350 35 HOH HOH . R 8 HOH BBB 51 351 152 HOH HOH . R 8 HOH BBB 52 352 16 HOH HOH . R 8 HOH BBB 53 353 70 HOH HOH . R 8 HOH BBB 54 354 105 HOH HOH . R 8 HOH BBB 55 355 34 HOH HOH . R 8 HOH BBB 56 356 220 HOH HOH . R 8 HOH BBB 57 357 172 HOH HOH . R 8 HOH BBB 58 358 124 HOH HOH . R 8 HOH BBB 59 359 83 HOH HOH . R 8 HOH BBB 60 360 236 HOH HOH . R 8 HOH BBB 61 361 37 HOH HOH . R 8 HOH BBB 62 362 125 HOH HOH . R 8 HOH BBB 63 363 166 HOH HOH . R 8 HOH BBB 64 364 42 HOH HOH . R 8 HOH BBB 65 365 148 HOH HOH . R 8 HOH BBB 66 366 19 HOH HOH . R 8 HOH BBB 67 367 235 HOH HOH . R 8 HOH BBB 68 368 186 HOH HOH . R 8 HOH BBB 69 369 29 HOH HOH . R 8 HOH BBB 70 370 151 HOH HOH . R 8 HOH BBB 71 371 102 HOH HOH . R 8 HOH BBB 72 372 180 HOH HOH . R 8 HOH BBB 73 373 62 HOH HOH . R 8 HOH BBB 74 374 20 HOH HOH . R 8 HOH BBB 75 375 84 HOH HOH . R 8 HOH BBB 76 376 123 HOH HOH . R 8 HOH BBB 77 377 178 HOH HOH . R 8 HOH BBB 78 378 219 HOH HOH . R 8 HOH BBB 79 379 30 HOH HOH . R 8 HOH BBB 80 380 194 HOH HOH . R 8 HOH BBB 81 381 165 HOH HOH . R 8 HOH BBB 82 382 184 HOH HOH . R 8 HOH BBB 83 383 168 HOH HOH . R 8 HOH BBB 84 384 74 HOH HOH . R 8 HOH BBB 85 385 136 HOH HOH . R 8 HOH BBB 86 386 85 HOH HOH . R 8 HOH BBB 87 387 101 HOH HOH . R 8 HOH BBB 88 388 65 HOH HOH . R 8 HOH BBB 89 389 209 HOH HOH . R 8 HOH BBB 90 390 179 HOH HOH . R 8 HOH BBB 91 391 182 HOH HOH . R 8 HOH BBB 92 392 169 HOH HOH . R 8 HOH BBB 93 393 164 HOH HOH . R 8 HOH BBB 94 394 201 HOH HOH . R 8 HOH BBB 95 395 106 HOH HOH . R 8 HOH BBB 96 396 171 HOH HOH . S 8 HOH AAA 1 301 208 HOH HOH . S 8 HOH AAA 2 302 81 HOH HOH . S 8 HOH AAA 3 303 142 HOH HOH . S 8 HOH AAA 4 304 158 HOH HOH . S 8 HOH AAA 5 305 97 HOH HOH . S 8 HOH AAA 6 306 141 HOH HOH . S 8 HOH AAA 7 307 114 HOH HOH . S 8 HOH AAA 8 308 41 HOH HOH . S 8 HOH AAA 9 309 154 HOH HOH . S 8 HOH AAA 10 310 9 HOH HOH . S 8 HOH AAA 11 311 39 HOH HOH . S 8 HOH AAA 12 312 147 HOH HOH . S 8 HOH AAA 13 313 90 HOH HOH . S 8 HOH AAA 14 314 32 HOH HOH . S 8 HOH AAA 15 315 46 HOH HOH . S 8 HOH AAA 16 316 77 HOH HOH . S 8 HOH AAA 17 317 58 HOH HOH . S 8 HOH AAA 18 318 198 HOH HOH . S 8 HOH AAA 19 319 130 HOH HOH . S 8 HOH AAA 20 320 162 HOH HOH . S 8 HOH AAA 21 321 138 HOH HOH . S 8 HOH AAA 22 322 191 HOH HOH . S 8 HOH AAA 23 323 55 HOH HOH . S 8 HOH AAA 24 324 216 HOH HOH . S 8 HOH AAA 25 325 190 HOH HOH . S 8 HOH AAA 26 326 232 HOH HOH . S 8 HOH AAA 27 327 222 HOH HOH . S 8 HOH AAA 28 328 67 HOH HOH . S 8 HOH AAA 29 329 13 HOH HOH . S 8 HOH AAA 30 330 103 HOH HOH . S 8 HOH AAA 31 331 127 HOH HOH . S 8 HOH AAA 32 332 230 HOH HOH . S 8 HOH AAA 33 333 197 HOH HOH . S 8 HOH AAA 34 334 177 HOH HOH . S 8 HOH AAA 35 335 1 HOH HOH . S 8 HOH AAA 36 336 47 HOH HOH . S 8 HOH AAA 37 337 118 HOH HOH . S 8 HOH AAA 38 338 181 HOH HOH . S 8 HOH AAA 39 339 2 HOH HOH . S 8 HOH AAA 40 340 64 HOH HOH . S 8 HOH AAA 41 341 204 HOH HOH . S 8 HOH AAA 42 342 45 HOH HOH . S 8 HOH AAA 43 343 112 HOH HOH . S 8 HOH AAA 44 344 111 HOH HOH . S 8 HOH AAA 45 345 10 HOH HOH . S 8 HOH AAA 46 346 72 HOH HOH . S 8 HOH AAA 47 347 210 HOH HOH . S 8 HOH AAA 48 348 213 HOH HOH . S 8 HOH AAA 49 349 33 HOH HOH . S 8 HOH AAA 50 350 94 HOH HOH . S 8 HOH AAA 51 351 110 HOH HOH . S 8 HOH AAA 52 352 133 HOH HOH . S 8 HOH AAA 53 353 24 HOH HOH . S 8 HOH AAA 54 354 57 HOH HOH . S 8 HOH AAA 55 355 23 HOH HOH . S 8 HOH AAA 56 356 163 HOH HOH . S 8 HOH AAA 57 357 200 HOH HOH . S 8 HOH AAA 58 358 87 HOH HOH . S 8 HOH AAA 59 359 92 HOH HOH . S 8 HOH AAA 60 360 61 HOH HOH . S 8 HOH AAA 61 361 227 HOH HOH . S 8 HOH AAA 62 362 18 HOH HOH . S 8 HOH AAA 63 363 69 HOH HOH . S 8 HOH AAA 64 364 60 HOH HOH . S 8 HOH AAA 65 365 40 HOH HOH . S 8 HOH AAA 66 366 27 HOH HOH . S 8 HOH AAA 67 367 56 HOH HOH . S 8 HOH AAA 68 368 88 HOH HOH . S 8 HOH AAA 69 369 11 HOH HOH . S 8 HOH AAA 70 370 221 HOH HOH . S 8 HOH AAA 71 371 50 HOH HOH . S 8 HOH AAA 72 372 28 HOH HOH . S 8 HOH AAA 73 373 160 HOH HOH . S 8 HOH AAA 74 374 82 HOH HOH . S 8 HOH AAA 75 375 7 HOH HOH . S 8 HOH AAA 76 376 146 HOH HOH . S 8 HOH AAA 77 377 15 HOH HOH . S 8 HOH AAA 78 378 52 HOH HOH . S 8 HOH AAA 79 379 14 HOH HOH . S 8 HOH AAA 80 380 66 HOH HOH . S 8 HOH AAA 81 381 207 HOH HOH . S 8 HOH AAA 82 382 43 HOH HOH . S 8 HOH AAA 83 383 38 HOH HOH . S 8 HOH AAA 84 384 107 HOH HOH . S 8 HOH AAA 85 385 79 HOH HOH . S 8 HOH AAA 86 386 31 HOH HOH . S 8 HOH AAA 87 387 21 HOH HOH . S 8 HOH AAA 88 388 6 HOH HOH . S 8 HOH AAA 89 389 25 HOH HOH . S 8 HOH AAA 90 390 5 HOH HOH . S 8 HOH AAA 91 391 140 HOH HOH . S 8 HOH AAA 92 392 237 HOH HOH . S 8 HOH AAA 93 393 137 HOH HOH . S 8 HOH AAA 94 394 59 HOH HOH . S 8 HOH AAA 95 395 80 HOH HOH . S 8 HOH AAA 96 396 224 HOH HOH . S 8 HOH AAA 97 397 228 HOH HOH . S 8 HOH AAA 98 398 99 HOH HOH . S 8 HOH AAA 99 399 187 HOH HOH . S 8 HOH AAA 100 400 139 HOH HOH . S 8 HOH AAA 101 401 238 HOH HOH . S 8 HOH AAA 102 402 109 HOH HOH . S 8 HOH AAA 103 403 145 HOH HOH . S 8 HOH AAA 104 404 175 HOH HOH . S 8 HOH AAA 105 405 26 HOH HOH . S 8 HOH AAA 106 406 225 HOH HOH . S 8 HOH AAA 107 407 193 HOH HOH . S 8 HOH AAA 108 408 48 HOH HOH . S 8 HOH AAA 109 409 98 HOH HOH . S 8 HOH AAA 110 410 183 HOH HOH . S 8 HOH AAA 111 411 17 HOH HOH . S 8 HOH AAA 112 412 129 HOH HOH . S 8 HOH AAA 113 413 170 HOH HOH . S 8 HOH AAA 114 414 44 HOH HOH . S 8 HOH AAA 115 415 149 HOH HOH . S 8 HOH AAA 116 416 135 HOH HOH . S 8 HOH AAA 117 417 49 HOH HOH . S 8 HOH AAA 118 418 234 HOH HOH . S 8 HOH AAA 119 419 233 HOH HOH . S 8 HOH AAA 120 420 226 HOH HOH . S 8 HOH AAA 121 421 157 HOH HOH . S 8 HOH AAA 122 422 229 HOH HOH . S 8 HOH AAA 123 423 126 HOH HOH . T 8 HOH CCC 1 201 212 HOH HOH . T 8 HOH CCC 2 202 75 HOH HOH . T 8 HOH CCC 3 203 144 HOH HOH . U 8 HOH DDD 1 201 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 5 -17.711 -11.073 -15.322 1 66.58 ? C1 EDO 205 BBB 1 HETATM 2 O O1 EDO . . . I 5 -16.439 -11.276 -15.907 1 67.93 ? O1 EDO 205 BBB 1 HETATM 3 C C2 EDO . . . I 5 -18.377 -12.338 -14.919 1 65.19 ? C2 EDO 205 BBB 1 HETATM 4 O O2 EDO . . . I 5 -18.457 -12.516 -13.518 1 64.86 ? O2 EDO 205 BBB 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 4 #