data_7Q9U
#
_model_server_result.job_id            ocGl7a5_P_AGA_QKj98Dgw 
_model_server_result.datetime_utc      '2024-11-22 21:27:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7q9u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":204}' 
#
_entry.id    7Q9U 
#
_exptl.entry_id    7Q9U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          6 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         82.771 
_cell.angle_beta          81.709 
_cell.angle_gamma         68.447 
_cell.entry_id            7Q9U 
_cell.length_a            51.086 
_cell.length_b            57.925 
_cell.length_c            78.913 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7Q9U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,Q 1 1 
B,G,H,I,R 2 1 
C,J,K,L,S 3 1 
D,M,N,O,P,T 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 K N N 
? 6 L N N 
? 6 N N N 
? 6 O N N 
? 6 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ILE 184 AAA ILE 184 1_555 A N CMT 185 AAA CMT 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.267 ? 
covale ? covale2 A SG CMT 185 AAA CMT 185 1_555 F C1 FAR . AAA FAR 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.622 ? 
covale ? covale3 B C ILE 184 BBB ILE 184 1_555 B N CMT 185 BBB CMT 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.264 ? 
covale ? covale4 B SG CMT 185 BBB CMT 185 1_555 I C1 FAR . BBB FAR 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 99 n n 
C1 C2 EDO sing 100 n n 
C1 H11 EDO sing 101 n n 
C1 H12 EDO sing 102 n n 
O1 HO1 EDO sing 103 n n 
C2 O2 EDO sing 104 n n 
C2 H21 EDO sing 105 n n 
C2 H22 EDO sing 106 n n 
O2 HO2 EDO sing 107 n n 
#
_atom_sites.entry_id                     7Q9U 
_atom_sites.fract_transf_matrix[1][1]    0.019575 
_atom_sites.fract_transf_matrix[1][2]    -0.007732 
_atom_sites.fract_transf_matrix[1][3]    -0.002247 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018562 
_atom_sites.fract_transf_matrix[2][3]    -0.001474 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012846 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 GDP AAA 1 201 2 GDP GDP . 
F 4 FAR AAA 1 202 1 FAR FAR . 
G 5 SO4 BBB 1 201 201 SO4 SO4 . 
H 3 GDP BBB 1 202 1 GDP GDP . 
I 4 FAR BBB 1 203 2 FAR FAR . 
J 5 SO4 DDD 1 201 201 SO4 SO4 . 
K 6 EDO DDD 1 202 301 EDO EDO . 
L 6 EDO DDD 1 203 401 EDO EDO . 
M 5 SO4 CCC 1 201 201 SO4 SO4 . 
N 6 EDO CCC 1 202 301 EDO EDO . 
O 6 EDO CCC 1 203 401 EDO EDO . 
P 6 EDO CCC 1 204 501 EDO EDO . 
Q 7 HOH AAA 1 301 92 HOH HOH . 
Q 7 HOH AAA 2 302 13 HOH HOH . 
Q 7 HOH AAA 3 303 146 HOH HOH . 
Q 7 HOH AAA 4 304 105 HOH HOH . 
Q 7 HOH AAA 5 305 139 HOH HOH . 
Q 7 HOH AAA 6 306 34 HOH HOH . 
Q 7 HOH AAA 7 307 103 HOH HOH . 
Q 7 HOH AAA 8 308 61 HOH HOH . 
Q 7 HOH AAA 9 309 9 HOH HOH . 
Q 7 HOH AAA 10 310 47 HOH HOH . 
Q 7 HOH AAA 11 311 84 HOH HOH . 
Q 7 HOH AAA 12 312 72 HOH HOH . 
Q 7 HOH AAA 13 313 113 HOH HOH . 
Q 7 HOH AAA 14 314 80 HOH HOH . 
Q 7 HOH AAA 15 315 18 HOH HOH . 
Q 7 HOH AAA 16 316 11 HOH HOH . 
Q 7 HOH AAA 17 317 77 HOH HOH . 
Q 7 HOH AAA 18 318 101 HOH HOH . 
Q 7 HOH AAA 19 319 65 HOH HOH . 
Q 7 HOH AAA 20 320 12 HOH HOH . 
Q 7 HOH AAA 21 321 143 HOH HOH . 
Q 7 HOH AAA 22 322 123 HOH HOH . 
Q 7 HOH AAA 23 323 148 HOH HOH . 
Q 7 HOH AAA 24 324 57 HOH HOH . 
Q 7 HOH AAA 25 325 120 HOH HOH . 
Q 7 HOH AAA 26 326 131 HOH HOH . 
Q 7 HOH AAA 27 327 22 HOH HOH . 
Q 7 HOH AAA 28 328 132 HOH HOH . 
Q 7 HOH AAA 29 329 108 HOH HOH . 
Q 7 HOH AAA 30 330 157 HOH HOH . 
Q 7 HOH AAA 31 331 154 HOH HOH . 
Q 7 HOH AAA 32 332 19 HOH HOH . 
R 7 HOH BBB 1 301 136 HOH HOH . 
R 7 HOH BBB 2 302 128 HOH HOH . 
R 7 HOH BBB 3 303 155 HOH HOH . 
R 7 HOH BBB 4 304 38 HOH HOH . 
R 7 HOH BBB 5 305 42 HOH HOH . 
R 7 HOH BBB 6 306 121 HOH HOH . 
R 7 HOH BBB 7 307 127 HOH HOH . 
R 7 HOH BBB 8 308 5 HOH HOH . 
R 7 HOH BBB 9 309 55 HOH HOH . 
R 7 HOH BBB 10 310 2 HOH HOH . 
R 7 HOH BBB 11 311 21 HOH HOH . 
R 7 HOH BBB 12 312 62 HOH HOH . 
R 7 HOH BBB 13 313 99 HOH HOH . 
R 7 HOH BBB 14 314 64 HOH HOH . 
R 7 HOH BBB 15 315 142 HOH HOH . 
R 7 HOH BBB 16 316 27 HOH HOH . 
R 7 HOH BBB 17 317 119 HOH HOH . 
R 7 HOH BBB 18 318 25 HOH HOH . 
R 7 HOH BBB 19 319 7 HOH HOH . 
R 7 HOH BBB 20 320 23 HOH HOH . 
R 7 HOH BBB 21 321 97 HOH HOH . 
R 7 HOH BBB 22 322 63 HOH HOH . 
R 7 HOH BBB 23 323 76 HOH HOH . 
R 7 HOH BBB 24 324 70 HOH HOH . 
R 7 HOH BBB 25 325 56 HOH HOH . 
R 7 HOH BBB 26 326 110 HOH HOH . 
R 7 HOH BBB 27 327 14 HOH HOH . 
R 7 HOH BBB 28 328 134 HOH HOH . 
R 7 HOH BBB 29 329 75 HOH HOH . 
R 7 HOH BBB 30 330 28 HOH HOH . 
R 7 HOH BBB 31 331 116 HOH HOH . 
R 7 HOH BBB 32 332 59 HOH HOH . 
R 7 HOH BBB 33 333 41 HOH HOH . 
R 7 HOH BBB 34 334 46 HOH HOH . 
R 7 HOH BBB 35 335 48 HOH HOH . 
R 7 HOH BBB 36 336 58 HOH HOH . 
R 7 HOH BBB 37 337 114 HOH HOH . 
R 7 HOH BBB 38 338 66 HOH HOH . 
R 7 HOH BBB 39 339 117 HOH HOH . 
R 7 HOH BBB 40 340 53 HOH HOH . 
R 7 HOH BBB 41 341 67 HOH HOH . 
R 7 HOH BBB 42 342 69 HOH HOH . 
R 7 HOH BBB 43 343 88 HOH HOH . 
R 7 HOH BBB 44 344 24 HOH HOH . 
R 7 HOH BBB 45 345 43 HOH HOH . 
S 7 HOH DDD 1 301 94 HOH HOH . 
S 7 HOH DDD 2 302 50 HOH HOH . 
S 7 HOH DDD 3 303 107 HOH HOH . 
S 7 HOH DDD 4 304 78 HOH HOH . 
S 7 HOH DDD 5 305 30 HOH HOH . 
S 7 HOH DDD 6 306 33 HOH HOH . 
S 7 HOH DDD 7 307 4 HOH HOH . 
S 7 HOH DDD 8 308 79 HOH HOH . 
S 7 HOH DDD 9 309 124 HOH HOH . 
S 7 HOH DDD 10 310 15 HOH HOH . 
S 7 HOH DDD 11 311 86 HOH HOH . 
S 7 HOH DDD 12 312 152 HOH HOH . 
S 7 HOH DDD 13 313 37 HOH HOH . 
S 7 HOH DDD 14 314 36 HOH HOH . 
S 7 HOH DDD 15 315 156 HOH HOH . 
S 7 HOH DDD 16 316 31 HOH HOH . 
S 7 HOH DDD 17 317 90 HOH HOH . 
S 7 HOH DDD 18 318 102 HOH HOH . 
S 7 HOH DDD 19 319 130 HOH HOH . 
S 7 HOH DDD 20 320 17 HOH HOH . 
S 7 HOH DDD 21 321 151 HOH HOH . 
S 7 HOH DDD 22 322 141 HOH HOH . 
S 7 HOH DDD 23 323 150 HOH HOH . 
S 7 HOH DDD 24 324 104 HOH HOH . 
S 7 HOH DDD 25 325 89 HOH HOH . 
S 7 HOH DDD 26 326 129 HOH HOH . 
S 7 HOH DDD 27 327 87 HOH HOH . 
S 7 HOH DDD 28 328 16 HOH HOH . 
S 7 HOH DDD 29 329 122 HOH HOH . 
T 7 HOH CCC 1 301 83 HOH HOH . 
T 7 HOH CCC 2 302 20 HOH HOH . 
T 7 HOH CCC 3 303 51 HOH HOH . 
T 7 HOH CCC 4 304 39 HOH HOH . 
T 7 HOH CCC 5 305 144 HOH HOH . 
T 7 HOH CCC 6 306 106 HOH HOH . 
T 7 HOH CCC 7 307 147 HOH HOH . 
T 7 HOH CCC 8 308 96 HOH HOH . 
T 7 HOH CCC 9 309 54 HOH HOH . 
T 7 HOH CCC 10 310 32 HOH HOH . 
T 7 HOH CCC 11 311 6 HOH HOH . 
T 7 HOH CCC 12 312 10 HOH HOH . 
T 7 HOH CCC 13 313 45 HOH HOH . 
T 7 HOH CCC 14 314 1 HOH HOH . 
T 7 HOH CCC 15 315 35 HOH HOH . 
T 7 HOH CCC 16 316 118 HOH HOH . 
T 7 HOH CCC 17 317 153 HOH HOH . 
T 7 HOH CCC 18 318 85 HOH HOH . 
T 7 HOH CCC 19 319 3 HOH HOH . 
T 7 HOH CCC 20 320 133 HOH HOH . 
T 7 HOH CCC 21 321 52 HOH HOH . 
T 7 HOH CCC 22 322 73 HOH HOH . 
T 7 HOH CCC 23 323 137 HOH HOH . 
T 7 HOH CCC 24 324 125 HOH HOH . 
T 7 HOH CCC 25 325 26 HOH HOH . 
T 7 HOH CCC 26 326 100 HOH HOH . 
T 7 HOH CCC 27 327 111 HOH HOH . 
T 7 HOH CCC 28 328 74 HOH HOH . 
T 7 HOH CCC 29 329 115 HOH HOH . 
T 7 HOH CCC 30 330 138 HOH HOH . 
T 7 HOH CCC 31 331 81 HOH HOH . 
T 7 HOH CCC 32 332 60 HOH HOH . 
T 7 HOH CCC 33 333 49 HOH HOH . 
T 7 HOH CCC 34 334 145 HOH HOH . 
T 7 HOH CCC 35 335 112 HOH HOH . 
T 7 HOH CCC 36 336 93 HOH HOH . 
T 7 HOH CCC 37 337 29 HOH HOH . 
T 7 HOH CCC 38 338 8 HOH HOH . 
T 7 HOH CCC 39 339 44 HOH HOH . 
T 7 HOH CCC 40 340 135 HOH HOH . 
T 7 HOH CCC 41 341 149 HOH HOH . 
T 7 HOH CCC 42 342 68 HOH HOH . 
T 7 HOH CCC 43 343 91 HOH HOH . 
T 7 HOH CCC 44 344 109 HOH HOH . 
T 7 HOH CCC 45 345 140 HOH HOH . 
T 7 HOH CCC 46 346 82 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . P 6 -29.309 82.928 61.746 1 59.66 ? C1 EDO 204 CCC 1 
HETATM 2 O O1 EDO . . . P 6 -29.823 81.871 62.534 1 61.24 ? O1 EDO 204 CCC 1 
HETATM 3 C C2 EDO . . . P 6 -30.252 84.019 61.392 1 62.69 ? C2 EDO 204 CCC 1 
HETATM 4 O O2 EDO . . . P 6 -30.231 85.237 62.112 1 48.97 ? O2 EDO 204 CCC 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    27 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#