data_7QB4 # _model_server_result.job_id 7Hutl-eiHijqbe9xd13-Eg _model_server_result.datetime_utc '2024-11-27 18:06:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qb4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":611}' # _entry.id 7QB4 # _exptl.entry_id 7QB4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.41 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7QB4 _cell.length_a 79.406 _cell.length_b 111.048 _cell.length_c 227.092 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QB4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id AA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 69 A CYS 69 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf2 A SG CYS 257 A CYS 257 1_555 A SG CYS 272 A CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 A SG CYS 409 A CYS 409 1_555 A SG CYS 529 A CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 B SG CYS 69 B CYS 69 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 B SG CYS 257 B CYS 257 1_555 B SG CYS 272 B CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf6 B SG CYS 409 B CYS 409 1_555 B SG CYS 529 B CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale1 A ND2 ASN 350 A ASN 350 1_555 C C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale2 A ND2 ASN 464 A ASN 464 1_555 D C1 NAG . A NAG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale3 B ND2 ASN 350 B ASN 350 1_555 Q C1 NAG . B NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? # _chem_comp.formula 'C15 H32 O8' _chem_comp.formula_weight 340.41 _chem_comp.id 9YU _chem_comp.mon_nstd_flag . _chem_comp.name 2-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C18 9YU sing 1 n n C17 O16 9YU sing 2 n n C18 O19 9YU sing 3 n n O16 C15 9YU sing 4 n n C14 C15 9YU sing 5 n n C14 O13 9YU sing 6 n n O19 C20 9YU sing 7 n n C20 C21 9YU sing 8 n n C12 O13 9YU sing 9 n n C12 C11 9YU sing 10 n n O01 C02 9YU sing 11 n n C02 C03 9YU sing 12 n n C11 O10 9YU sing 13 n n C21 O22 9YU sing 14 n n C03 O04 9YU sing 15 n n O22 C23 9YU sing 16 n n O10 C09 9YU sing 17 n n O04 C05 9YU sing 18 n n C09 C08 9YU sing 19 n n C05 C06 9YU sing 20 n n O07 C06 9YU sing 21 n n O07 C08 9YU sing 22 n n C02 H1 9YU sing 23 n n C02 H2 9YU sing 24 n n C03 H3 9YU sing 25 n n C03 H4 9YU sing 26 n n C05 H5 9YU sing 27 n n C05 H6 9YU sing 28 n n C06 H7 9YU sing 29 n n C06 H8 9YU sing 30 n n C08 H9 9YU sing 31 n n C08 H10 9YU sing 32 n n C09 H11 9YU sing 33 n n C09 H12 9YU sing 34 n n C11 H13 9YU sing 35 n n C11 H14 9YU sing 36 n n C12 H15 9YU sing 37 n n C12 H16 9YU sing 38 n n C14 H17 9YU sing 39 n n C14 H18 9YU sing 40 n n C15 H19 9YU sing 41 n n C15 H20 9YU sing 42 n n C17 H21 9YU sing 43 n n C17 H22 9YU sing 44 n n C18 H23 9YU sing 45 n n C18 H24 9YU sing 46 n n C20 H25 9YU sing 47 n n C20 H26 9YU sing 48 n n C21 H27 9YU sing 49 n n C21 H28 9YU sing 50 n n C23 H29 9YU sing 51 n n C23 H30 9YU sing 52 n n C23 H31 9YU sing 53 n n O01 H32 9YU sing 54 n n # _atom_sites.entry_id 7QB4 _atom_sites.fract_transf_matrix[1][1] 0.012594 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009005 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 601 544 NAG NAG . D 2 NAG A 1 602 544 NAG NAG . E 3 AJ9 A 1 603 1 AJ9 LP2 . F 4 PG0 A 1 604 1 PG0 P2G . G 4 PG0 A 1 605 2 PG0 P2G . H 4 PG0 A 1 606 3 PG0 P2G . I 4 PG0 A 1 607 5 PG0 P2G . J 4 PG0 A 1 608 9 PG0 P2G . K 4 PG0 A 1 609 1 PG0 P2G . L 4 PG0 A 1 610 2 PG0 P2G . M 4 PG0 A 1 611 3 PG0 P2G . N 4 PG0 A 1 612 4 PG0 P2G . O 4 PG0 A 1 613 6 PG0 P2G . P 4 PG0 A 1 614 8 PG0 P2G . Q 2 NAG B 1 601 544 NAG NAG . R 3 AJ9 B 1 602 1 AJ9 LP2 . S 5 EDO B 1 603 1 EDO EDO . T 5 EDO B 1 604 2 EDO EDO . U 5 EDO B 1 605 3 EDO EDO . V 4 PG0 B 1 606 6 PG0 P2G . W 4 PG0 B 1 607 7 PG0 P2G . X 4 PG0 B 1 608 5 PG0 P2G . Y 4 PG0 B 1 609 7 PG0 P2G . Z 6 TOE B 1 610 9 TOE P3G . AA 7 9YU B 1 611 1 9YU P7G . BA 8 HOH A 1 701 357 HOH HOH . BA 8 HOH A 2 702 345 HOH HOH . BA 8 HOH A 3 703 23 HOH HOH . BA 8 HOH A 4 704 349 HOH HOH . BA 8 HOH A 5 705 335 HOH HOH . BA 8 HOH A 6 706 33 HOH HOH . BA 8 HOH A 7 707 420 HOH HOH . BA 8 HOH A 8 708 325 HOH HOH . BA 8 HOH A 9 709 11 HOH HOH . BA 8 HOH A 10 710 5 HOH HOH . BA 8 HOH A 11 711 99 HOH HOH . BA 8 HOH A 12 712 436 HOH HOH . BA 8 HOH A 13 713 326 HOH HOH . BA 8 HOH A 14 714 37 HOH HOH . BA 8 HOH A 15 715 93 HOH HOH . BA 8 HOH A 16 716 440 HOH HOH . BA 8 HOH A 17 717 355 HOH HOH . BA 8 HOH A 18 718 54 HOH HOH . BA 8 HOH A 19 719 365 HOH HOH . BA 8 HOH A 20 720 21 HOH HOH . BA 8 HOH A 21 721 423 HOH HOH . BA 8 HOH A 22 722 97 HOH HOH . BA 8 HOH A 23 723 338 HOH HOH . BA 8 HOH A 24 724 68 HOH HOH . BA 8 HOH A 25 725 112 HOH HOH . BA 8 HOH A 26 726 336 HOH HOH . BA 8 HOH A 27 727 351 HOH HOH . BA 8 HOH A 28 728 347 HOH HOH . BA 8 HOH A 29 729 409 HOH HOH . BA 8 HOH A 30 730 364 HOH HOH . BA 8 HOH A 31 731 31 HOH HOH . BA 8 HOH A 32 732 422 HOH HOH . BA 8 HOH A 33 733 14 HOH HOH . BA 8 HOH A 34 734 118 HOH HOH . BA 8 HOH A 35 735 344 HOH HOH . BA 8 HOH A 36 736 350 HOH HOH . BA 8 HOH A 37 737 29 HOH HOH . BA 8 HOH A 38 738 45 HOH HOH . BA 8 HOH A 39 739 126 HOH HOH . BA 8 HOH A 40 740 348 HOH HOH . BA 8 HOH A 41 741 332 HOH HOH . BA 8 HOH A 42 742 41 HOH HOH . BA 8 HOH A 43 743 333 HOH HOH . BA 8 HOH A 44 744 209 HOH HOH . BA 8 HOH A 45 745 343 HOH HOH . BA 8 HOH A 46 746 331 HOH HOH . BA 8 HOH A 47 747 107 HOH HOH . BA 8 HOH A 48 748 7 HOH HOH . BA 8 HOH A 49 749 185 HOH HOH . BA 8 HOH A 50 750 111 HOH HOH . BA 8 HOH A 51 751 330 HOH HOH . BA 8 HOH A 52 752 40 HOH HOH . BA 8 HOH A 53 753 358 HOH HOH . BA 8 HOH A 54 754 55 HOH HOH . BA 8 HOH A 55 755 421 HOH HOH . BA 8 HOH A 56 756 419 HOH HOH . BA 8 HOH A 57 757 337 HOH HOH . BA 8 HOH A 58 758 2 HOH HOH . BA 8 HOH A 59 759 334 HOH HOH . BA 8 HOH A 60 760 366 HOH HOH . BA 8 HOH A 61 761 322 HOH HOH . BA 8 HOH A 62 762 132 HOH HOH . BA 8 HOH A 63 763 425 HOH HOH . BA 8 HOH A 64 764 327 HOH HOH . BA 8 HOH A 65 765 356 HOH HOH . BA 8 HOH A 66 766 438 HOH HOH . BA 8 HOH A 67 767 410 HOH HOH . BA 8 HOH A 68 768 169 HOH HOH . BA 8 HOH A 69 769 82 HOH HOH . BA 8 HOH A 70 770 437 HOH HOH . BA 8 HOH A 71 771 424 HOH HOH . BA 8 HOH A 72 772 439 HOH HOH . CA 8 HOH B 1 701 401 HOH HOH . CA 8 HOH B 2 702 430 HOH HOH . CA 8 HOH B 3 703 373 HOH HOH . CA 8 HOH B 4 704 371 HOH HOH . CA 8 HOH B 5 705 441 HOH HOH . CA 8 HOH B 6 706 378 HOH HOH . CA 8 HOH B 7 707 8 HOH HOH . CA 8 HOH B 8 708 4 HOH HOH . CA 8 HOH B 9 709 25 HOH HOH . CA 8 HOH B 10 710 377 HOH HOH . CA 8 HOH B 11 711 206 HOH HOH . CA 8 HOH B 12 712 141 HOH HOH . CA 8 HOH B 13 713 385 HOH HOH . CA 8 HOH B 14 714 374 HOH HOH . CA 8 HOH B 15 715 152 HOH HOH . CA 8 HOH B 16 716 181 HOH HOH . CA 8 HOH B 17 717 320 HOH HOH . CA 8 HOH B 18 718 30 HOH HOH . CA 8 HOH B 19 719 88 HOH HOH . CA 8 HOH B 20 720 445 HOH HOH . CA 8 HOH B 21 721 6 HOH HOH . CA 8 HOH B 22 722 9 HOH HOH . CA 8 HOH B 23 723 10 HOH HOH . CA 8 HOH B 24 724 405 HOH HOH . CA 8 HOH B 25 725 60 HOH HOH . CA 8 HOH B 26 726 69 HOH HOH . CA 8 HOH B 27 727 383 HOH HOH . CA 8 HOH B 28 728 75 HOH HOH . CA 8 HOH B 29 729 376 HOH HOH . CA 8 HOH B 30 730 166 HOH HOH . CA 8 HOH B 31 731 408 HOH HOH . CA 8 HOH B 32 732 168 HOH HOH . CA 8 HOH B 33 733 429 HOH HOH . CA 8 HOH B 34 734 394 HOH HOH . CA 8 HOH B 35 735 15 HOH HOH . CA 8 HOH B 36 736 87 HOH HOH . CA 8 HOH B 37 737 109 HOH HOH . CA 8 HOH B 38 738 83 HOH HOH . CA 8 HOH B 39 739 324 HOH HOH . CA 8 HOH B 40 740 442 HOH HOH . CA 8 HOH B 41 741 35 HOH HOH . CA 8 HOH B 42 742 400 HOH HOH . CA 8 HOH B 43 743 319 HOH HOH . CA 8 HOH B 44 744 143 HOH HOH . CA 8 HOH B 45 745 42 HOH HOH . CA 8 HOH B 46 746 407 HOH HOH . CA 8 HOH B 47 747 36 HOH HOH . CA 8 HOH B 48 748 134 HOH HOH . CA 8 HOH B 49 749 386 HOH HOH . CA 8 HOH B 50 750 428 HOH HOH . CA 8 HOH B 51 751 375 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 9YU . . . AA 7 13.603 7.2 -12.822 1 84.09 ? C02 9YU 611 B 1 HETATM 2 C C03 9YU . . . AA 7 14.78 7.607 -11.991 1 85.68 ? C03 9YU 611 B 1 HETATM 3 C C05 9YU . . . AA 7 16.853 6.755 -11.208 1 84 ? C05 9YU 611 B 1 HETATM 4 C C06 9YU . . . AA 7 17.431 5.606 -10.448 1 84.18 ? C06 9YU 611 B 1 HETATM 5 C C08 9YU . . . AA 7 19.584 4.585 -10.16 1 81.82 ? C08 9YU 611 B 1 HETATM 6 C C09 9YU . . . AA 7 20.285 4.029 -11.357 1 80.61 ? C09 9YU 611 B 1 HETATM 7 C C11 9YU . . . AA 7 21.235 5.734 -12.719 1 69.9 ? C11 9YU 611 B 1 HETATM 8 C C12 9YU . . . AA 7 22.513 5.82 -13.479 1 62.28 ? C12 9YU 611 B 1 HETATM 9 C C14 9YU . . . AA 7 22.862 8.058 -14.306 1 58.2 ? C14 9YU 611 B 1 HETATM 10 C C15 9YU . . . AA 7 21.796 9.007 -13.863 1 59.83 ? C15 9YU 611 B 1 HETATM 11 C C17 9YU . . . AA 7 20.751 10.396 -15.475 1 68.92 ? C17 9YU 611 B 1 HETATM 12 C C18 9YU . . . AA 7 19.694 11.206 -14.804 1 76.93 ? C18 9YU 611 B 1 HETATM 13 C C20 9YU . . . AA 7 17.678 10.876 -13.566 1 91.4 ? C20 9YU 611 B 1 HETATM 14 C C21 9YU . . . AA 7 17.375 10.118 -12.313 1 92.13 ? C21 9YU 611 B 1 HETATM 15 C C23 9YU . . . AA 7 15.781 10.24 -10.525 1 95.84 ? C23 9YU 611 B 1 HETATM 16 O O01 9YU . . . AA 7 12.775 8.29 -13.046 1 80.46 ? O01 9YU 611 B 1 HETATM 17 O O04 9YU . . . AA 7 15.549 6.519 -11.605 1 84.76 ? O04 9YU 611 B 1 HETATM 18 O O07 9YU . . . AA 7 18.809 5.666 -10.531 1 85.46 ? O07 9YU 611 B 1 HETATM 19 O O10 9YU . . . AA 7 21.369 4.807 -11.71 1 77.14 ? O10 9YU 611 B 1 HETATM 20 O O13 9YU . . . AA 7 23.004 7.095 -13.333 1 63.77 ? O13 9YU 611 B 1 HETATM 21 O O16 9YU . . . AA 7 21.813 10.162 -14.623 1 63.41 ? O16 9YU 611 B 1 HETATM 22 O O19 9YU . . . AA 7 18.798 10.357 -14.184 1 86.73 ? O19 9YU 611 B 1 HETATM 23 O O22 9YU . . . AA 7 16.149 10.526 -11.826 1 94.11 ? O22 9YU 611 B 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 23 #