data_7QB6 # _model_server_result.job_id MLSTKOCVbcgOcE4xOLxMOw _model_server_result.datetime_utc '2025-01-25 22:16:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qb6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7QB6 # _exptl.entry_id 7QB6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 102.046 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'MALONATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7QB6 _cell.length_a 102.803 _cell.length_b 102.803 _cell.length_c 223.386 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QB6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall 'I 4bw 2bw' _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H2 O4 -2' _chem_comp.formula_weight 102.046 _chem_comp.id MLI _chem_comp.mon_nstd_flag . _chem_comp.name 'MALONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MLI sing 265 n n C1 C3 MLI sing 266 n n C1 H11 MLI sing 267 n n C1 H12 MLI sing 268 n n C2 O6 MLI doub 269 n n C2 O7 MLI sing 270 n n C3 O8 MLI doub 271 n n C3 O9 MLI sing 272 n n # _atom_sites.entry_id 7QB6 _atom_sites.fract_transf_matrix[1][1] 0.009727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004477 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A8I A 1 201 201 A8I 3CB . D 3 MLI B 1 201 201 MLI MLI . E 4 HOH A 1 301 17 HOH HOH . E 4 HOH A 2 302 11 HOH HOH . E 4 HOH A 3 303 10 HOH HOH . E 4 HOH A 4 304 4 HOH HOH . E 4 HOH A 5 305 3 HOH HOH . E 4 HOH A 6 306 1 HOH HOH . E 4 HOH A 7 307 13 HOH HOH . E 4 HOH A 8 308 27 HOH HOH . E 4 HOH A 9 309 20 HOH HOH . E 4 HOH A 10 310 8 HOH HOH . E 4 HOH A 11 311 12 HOH HOH . E 4 HOH A 12 312 16 HOH HOH . E 4 HOH A 13 313 23 HOH HOH . F 4 HOH B 1 301 5 HOH HOH . F 4 HOH B 2 302 2 HOH HOH . F 4 HOH B 3 303 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLI . . . D 3 20.579 90.522 60.635 1 111.28 ? C1 MLI 201 B 1 HETATM 2 C C2 MLI . . . D 3 21.91 91.254 60.478 1 112.44 ? C2 MLI 201 B 1 HETATM 3 C C3 MLI . . . D 3 20.484 89.3 59.726 1 111.82 ? C3 MLI 201 B 1 HETATM 4 O O6 MLI . . . D 3 22.29 91.54 59.324 1 112.76 ? O6 MLI 201 B 1 HETATM 5 O O7 MLI . . . D 3 22.545 91.548 61.513 1 106.35 ? O7 MLI 201 B 1 HETATM 6 O O8 MLI . . . D 3 21.46 89.029 58.998 1 109.8 ? O8 MLI 201 B 1 HETATM 7 O O9 MLI . . . D 3 19.43 88.635 59.751 1 113.06 ? O9 MLI 201 B 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #