data_7QB9 # _model_server_result.job_id XX9dd5FjhfuMWt5f4RybnQ _model_server_result.datetime_utc '2024-10-15 11:22:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qb9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":510}' # _entry.id 7QB9 # _exptl.entry_id 7QB9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 22 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7QB9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QB9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND2 ASN 25 A ASN 25 1_555 C C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? covale ? covale2 A ND2 ASN 32 A ASN 32 1_555 D C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale3 B ND2 ASN 25 B ASN 25 1_555 P C1 NAG . B NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale4 B ND2 ASN 32 B ASN 32 1_555 Q C1 NAG . B NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7QB9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 501 504 NAG NAG . D 2 NAG A 1 502 505 NAG NAG . E 3 Y01 A 1 503 9 Y01 Y01 . F 3 Y01 A 1 504 10 Y01 Y01 . G 3 Y01 A 1 505 16 Y01 Y01 . H 3 Y01 A 1 506 3 Y01 Y01 . I 3 Y01 A 1 507 2 Y01 Y01 . J 3 Y01 A 1 508 2 Y01 Y01 . K 3 Y01 A 1 509 1 Y01 Y01 . L 3 Y01 A 1 510 1 Y01 Y01 . M 3 Y01 A 1 511 2 Y01 Y01 . N 3 Y01 A 1 512 3 Y01 Y01 . O 3 Y01 A 1 513 7 Y01 Y01 . P 2 NAG B 1 501 504 NAG NAG . Q 2 NAG B 1 502 505 NAG NAG . R 3 Y01 B 1 503 1 Y01 Y01 . S 3 Y01 B 1 504 6 Y01 Y01 . T 3 Y01 B 1 505 8 Y01 Y01 . U 3 Y01 B 1 506 13 Y01 Y01 . V 3 Y01 B 1 507 14 Y01 Y01 . W 3 Y01 B 1 508 1 Y01 Y01 . X 3 Y01 B 1 509 5 Y01 Y01 . Y 3 Y01 B 1 510 14 Y01 Y01 . Z 3 Y01 B 1 511 17 Y01 Y01 . AA 3 Y01 B 1 512 1 Y01 Y01 . BA 3 Y01 B 1 513 1 Y01 Y01 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . Y 3 115.685 112.545 107.332 1 75.76 ? CAA Y01 510 B 1 HETATM 2 C CBA Y01 . . . Y 3 116.173 113.635 106.388 1 75.76 ? CBA Y01 510 B 1 HETATM 3 C CAB Y01 . . . Y 3 117.682 113.561 106.226 1 75.76 ? CAB Y01 510 B 1 HETATM 4 C CAN Y01 . . . Y 3 115.73 115.023 106.858 1 75.76 ? CAN Y01 510 B 1 HETATM 5 C CAJ Y01 . . . Y 3 116.372 115.519 108.132 1 75.76 ? CAJ Y01 510 B 1 HETATM 6 C CAO Y01 . . . Y 3 115.392 115.675 109.269 1 75.76 ? CAO Y01 510 B 1 HETATM 7 C CBB Y01 . . . Y 3 115.993 116.178 110.591 1 75.76 ? CBB Y01 510 B 1 HETATM 8 C CAC Y01 . . . Y 3 116.387 117.648 110.467 1 75.76 ? CAC Y01 510 B 1 HETATM 9 C CBE Y01 . . . Y 3 115.024 115.9 111.762 1 75.76 ? CBE Y01 510 B 1 HETATM 10 C CAP Y01 . . . Y 3 114.327 114.513 111.624 1 75.76 ? CAP Y01 510 B 1 HETATM 11 C CAQ Y01 . . . Y 3 114.293 113.882 113.021 1 75.76 ? CAQ Y01 510 B 1 HETATM 12 C CBG Y01 . . . Y 3 114.469 115.079 113.938 1 75.76 ? CBG Y01 510 B 1 HETATM 13 C CBI Y01 . . . Y 3 115.556 115.918 113.237 1 75.76 ? CBI Y01 510 B 1 HETATM 14 C CAE Y01 . . . Y 3 116.94 115.248 113.302 1 75.76 ? CAE Y01 510 B 1 HETATM 15 C CAU Y01 . . . Y 3 115.577 117.279 113.947 1 75.76 ? CAU Y01 510 B 1 HETATM 16 C CAS Y01 . . . Y 3 115.817 117.134 115.455 1 75.76 ? CAS Y01 510 B 1 HETATM 17 C CBF Y01 . . . Y 3 114.81 116.2 116.148 1 75.76 ? CBF Y01 510 B 1 HETATM 18 C CBD Y01 . . . Y 3 114.702 114.842 115.425 1 75.76 ? CBD Y01 510 B 1 HETATM 19 C CAK Y01 . . . Y 3 113.562 114.025 116.021 1 75.76 ? CAK Y01 510 B 1 HETATM 20 C CAI Y01 . . . Y 3 113.523 114.09 117.512 1 75.76 ? CAI Y01 510 B 1 HETATM 21 C CAZ Y01 . . . Y 3 114.221 114.932 118.257 1 75.76 ? CAZ Y01 510 B 1 HETATM 22 C CAV Y01 . . . Y 3 114.152 114.862 119.766 1 75.76 ? CAV Y01 510 B 1 HETATM 23 C CBH Y01 . . . Y 3 115.083 116.049 117.675 1 75.76 ? CBH Y01 510 B 1 HETATM 24 C CAD Y01 . . . Y 3 116.559 115.71 117.957 1 75.76 ? CAD Y01 510 B 1 HETATM 25 C CAT Y01 . . . Y 3 114.708 117.372 118.382 1 75.76 ? CAT Y01 510 B 1 HETATM 26 C CAR Y01 . . . Y 3 114.649 117.272 119.909 1 75.76 ? CAR Y01 510 B 1 HETATM 27 C CBC Y01 . . . Y 3 113.709 116.182 120.352 1 75.76 ? CBC Y01 510 B 1 HETATM 28 O OAW Y01 . . . Y 3 113.759 116.056 121.805 1 75.76 ? OAW Y01 510 B 1 HETATM 29 C CAY Y01 . . . Y 3 112.798 115.362 122.413 1 75.76 ? CAY Y01 510 B 1 HETATM 30 O OAG Y01 . . . Y 3 111.738 115.113 121.914 1 75.76 ? OAG Y01 510 B 1 HETATM 31 C CAM Y01 . . . Y 3 113.208 114.921 123.79 1 75.76 ? CAM Y01 510 B 1 HETATM 32 C CAL Y01 . . . Y 3 113.53 116.023 124.777 1 75.76 ? CAL Y01 510 B 1 HETATM 33 C CAX Y01 . . . Y 3 112.429 117.054 124.96 1 75.76 ? CAX Y01 510 B 1 HETATM 34 O OAH Y01 . . . Y 3 111.312 116.66 125.348 1 75.76 ? OAH Y01 510 B 1 HETATM 35 O OAF Y01 . . . Y 3 112.692 118.247 124.713 1 75.76 ? OAF Y01 510 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #