data_7QBI # _model_server_result.job_id '_A99ktTUckCikzmsxVOl6g' _model_server_result.datetime_utc '2024-11-05 03:57:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qbi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":101}' # _entry.id 7QBI # _exptl.entry_id 7QBI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7QBI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QBI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND2 ASN 25 A ASN 25 1_555 E C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 A ND2 ASN 32 A ASN 32 1_555 F C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale3 D ND2 ASN 25 B ASN 25 1_555 P C1 NAG . B NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale4 D ND2 ASN 32 B ASN 32 1_555 O C1 NAG . B NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7QBI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NAG A 1 501 303 NAG NAG . F 3 NAG A 1 502 304 NAG NAG . G 4 Y01 A 1 503 1 Y01 Y01 . H 4 Y01 A 1 504 2 Y01 Y01 . I 4 Y01 A 1 505 6 Y01 Y01 . J 4 Y01 A 1 506 3 Y01 Y01 . K 4 Y01 I 1 101 2 Y01 Y01 . L 4 Y01 I 1 102 3 Y01 Y01 . M 4 Y01 K 1 101 3 Y01 Y01 . N 4 Y01 K 1 102 3 Y01 Y01 . O 3 NAG B 1 501 304 NAG NAG . P 3 NAG B 1 502 305 NAG NAG . Q 4 Y01 B 1 503 1 Y01 Y01 . R 4 Y01 B 1 504 1 Y01 Y01 . S 4 Y01 B 1 505 4 Y01 Y01 . T 4 Y01 B 1 506 3 Y01 Y01 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . K 4 151.822 106.942 136.212 1 60.36 ? CAA Y01 101 I 1 HETATM 2 C CBA Y01 . . . K 4 152.02 108.255 135.469 1 60.36 ? CBA Y01 101 I 1 HETATM 3 C CAB Y01 . . . K 4 150.695 108.754 134.91 1 60.36 ? CAB Y01 101 I 1 HETATM 4 C CAN Y01 . . . K 4 153.079 108.122 134.366 1 60.36 ? CAN Y01 101 I 1 HETATM 5 C CAJ Y01 . . . K 4 152.737 107.173 133.231 1 60.36 ? CAJ Y01 101 I 1 HETATM 6 C CAO Y01 . . . K 4 153.85 107.029 132.215 1 60.36 ? CAO Y01 101 I 1 HETATM 7 C CBB Y01 . . . K 4 154.136 108.282 131.369 1 60.36 ? CBB Y01 101 I 1 HETATM 8 C CAC Y01 . . . K 4 155.61 108.667 131.47 1 60.36 ? CAC Y01 101 I 1 HETATM 9 C CBE Y01 . . . K 4 153.665 108.065 129.916 1 60.36 ? CBE Y01 101 I 1 HETATM 10 C CAP Y01 . . . K 4 152.14 107.772 129.835 1 60.36 ? CAP Y01 101 I 1 HETATM 11 C CAQ Y01 . . . K 4 151.632 108.37 128.511 1 60.36 ? CAQ Y01 101 I 1 HETATM 12 C CBG Y01 . . . K 4 152.91 108.706 127.753 1 60.36 ? CBG Y01 101 I 1 HETATM 13 C CBI Y01 . . . K 4 153.883 109.186 128.851 1 60.36 ? CBI Y01 101 I 1 HETATM 14 C CAE Y01 . . . K 4 153.487 110.557 129.439 1 60.36 ? CAE Y01 101 I 1 HETATM 15 C CAU Y01 . . . K 4 155.269 109.252 128.2 1 60.36 ? CAU Y01 101 I 1 HETATM 16 C CAS Y01 . . . K 4 155.277 110.168 126.973 1 60.36 ? CAS Y01 101 I 1 HETATM 17 C CBF Y01 . . . K 4 154.226 109.788 125.912 1 60.36 ? CBF Y01 101 I 1 HETATM 18 C CBD Y01 . . . K 4 152.822 109.605 126.523 1 60.36 ? CBD Y01 101 I 1 HETATM 19 C CAK Y01 . . . K 4 151.879 109.001 125.487 1 60.36 ? CAK Y01 101 I 1 HETATM 20 C CAI Y01 . . . K 4 152.074 109.567 124.116 1 60.36 ? CAI Y01 101 I 1 HETATM 21 C CAZ Y01 . . . K 4 153.053 110.386 123.758 1 60.36 ? CAZ Y01 101 I 1 HETATM 22 C CAV Y01 . . . K 4 153.068 111.012 122.376 1 60.36 ? CAV Y01 101 I 1 HETATM 23 C CBH Y01 . . . K 4 154.219 110.742 124.675 1 60.36 ? CBH Y01 101 I 1 HETATM 24 C CAD Y01 . . . K 4 154.07 112.221 125.087 1 60.36 ? CAD Y01 101 I 1 HETATM 25 C CAT Y01 . . . K 4 155.532 110.551 123.883 1 60.36 ? CAT Y01 101 I 1 HETATM 26 C CAR Y01 . . . K 4 155.537 111.235 122.514 1 60.36 ? CAR Y01 101 I 1 HETATM 27 C CBC Y01 . . . K 4 154.385 110.77 121.662 1 60.36 ? CBC Y01 101 I 1 HETATM 28 O OAW Y01 . . . K 4 154.397 111.538 120.421 1 60.36 ? OAW Y01 101 I 1 HETATM 29 C CAY Y01 . . . K 4 153.495 111.251 119.486 1 60.36 ? CAY Y01 101 I 1 HETATM 30 O OAG Y01 . . . K 4 152.912 110.207 119.423 1 60.36 ? OAG Y01 101 I 1 HETATM 31 C CAM Y01 . . . K 4 153.248 112.418 118.566 1 60.36 ? CAM Y01 101 I 1 HETATM 32 C CAL Y01 . . . K 4 153.561 112.174 117.102 1 60.36 ? CAL Y01 101 I 1 HETATM 33 C CAX Y01 . . . K 4 152.607 111.223 116.401 1 60.36 ? CAX Y01 101 I 1 HETATM 34 O OAH Y01 . . . K 4 152.572 110.036 116.779 1 60.36 ? OAH Y01 101 I 1 HETATM 35 O OAF Y01 . . . K 4 151.898 111.673 115.479 1 60.36 ? OAF Y01 101 I 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #