data_7QBI
#
_model_server_result.job_id            DrwG_kFeNLGduPt-hYvm7A 
_model_server_result.datetime_utc      '2024-11-24 19:21:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7qbi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":504}' 
#
_entry.id    7QBI 
#
_exptl.entry_id    7QBI 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7QBI 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QBI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 Q N N 
? 4 R N N 
? 4 S N N 
? 4 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A ND2 ASN 25 A ASN 25 1_555 E C1 NAG . A NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale2 A ND2 ASN 32 A ASN 32 1_555 F C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
covale ? covale3 D ND2 ASN 25 B ASN 25 1_555 P C1 NAG . B NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale4 D ND2 ASN 32 B ASN 32 1_555 O C1 NAG . B NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 404 n n 
CBA CAB Y01 sing 405 n n 
CBA CAN Y01 sing 406 n n 
CAN CAJ Y01 sing 407 n n 
CAJ CAO Y01 sing 408 n n 
CAO CBB Y01 sing 409 n n 
CBB CAC Y01 sing 410 n n 
CBB CBE Y01 sing 411 n n 
CBE CAP Y01 sing 412 n n 
CBE CBI Y01 sing 413 n n 
CAP CAQ Y01 sing 414 n n 
CAQ CBG Y01 sing 415 n n 
CBG CBI Y01 sing 416 n n 
CBG CBD Y01 sing 417 n n 
CBI CAE Y01 sing 418 n n 
CBI CAU Y01 sing 419 n n 
CAU CAS Y01 sing 420 n n 
CAS CBF Y01 sing 421 n n 
CBF CBD Y01 sing 422 n n 
CBF CBH Y01 sing 423 n n 
CBD CAK Y01 sing 424 n n 
CAK CAI Y01 sing 425 n n 
CAI CAZ Y01 doub 426 n n 
CAZ CAV Y01 sing 427 n n 
CAZ CBH Y01 sing 428 n n 
CAV CBC Y01 sing 429 n n 
CBH CAD Y01 sing 430 n n 
CBH CAT Y01 sing 431 n n 
CAT CAR Y01 sing 432 n n 
CAR CBC Y01 sing 433 n n 
CBC OAW Y01 sing 434 n n 
OAW CAY Y01 sing 435 n n 
CAY OAG Y01 doub 436 n n 
CAY CAM Y01 sing 437 n n 
CAM CAL Y01 sing 438 n n 
CAL CAX Y01 sing 439 n n 
CAX OAH Y01 sing 440 n n 
CAX OAF Y01 doub 441 n n 
CAA HAA1 Y01 sing 442 n n 
CAA HAA2 Y01 sing 443 n n 
CAA HAA3 Y01 sing 444 n n 
CBA HBA Y01 sing 445 n n 
CAB HAB1 Y01 sing 446 n n 
CAB HAB2 Y01 sing 447 n n 
CAB HAB3 Y01 sing 448 n n 
CAN HAN1 Y01 sing 449 n n 
CAN HAN2 Y01 sing 450 n n 
CAJ HAJ1 Y01 sing 451 n n 
CAJ HAJ2 Y01 sing 452 n n 
CAO HAO1 Y01 sing 453 n n 
CAO HAO2 Y01 sing 454 n n 
CBB HBB Y01 sing 455 n n 
CAC HAC1 Y01 sing 456 n n 
CAC HAC2 Y01 sing 457 n n 
CAC HAC3 Y01 sing 458 n n 
CBE HBE Y01 sing 459 n n 
CAP HAP1 Y01 sing 460 n n 
CAP HAP2 Y01 sing 461 n n 
CAQ HAQ1 Y01 sing 462 n n 
CAQ HAQ2 Y01 sing 463 n n 
CBG HBG Y01 sing 464 n n 
CBD HBD Y01 sing 465 n n 
CAE HAE1 Y01 sing 466 n n 
CAE HAE2 Y01 sing 467 n n 
CAE HAE3 Y01 sing 468 n n 
CAU HAU1 Y01 sing 469 n n 
CAU HAU2 Y01 sing 470 n n 
CAS HAS1 Y01 sing 471 n n 
CAS HAS2 Y01 sing 472 n n 
CBF HBF Y01 sing 473 n n 
CAK HAK1 Y01 sing 474 n n 
CAK HAK2 Y01 sing 475 n n 
CAI HAI Y01 sing 476 n n 
CAV HAV1 Y01 sing 477 n n 
CAV HAV2 Y01 sing 478 n n 
CBC HBC Y01 sing 479 n n 
CAD HAD1 Y01 sing 480 n n 
CAD HAD2 Y01 sing 481 n n 
CAD HAD3 Y01 sing 482 n n 
CAT HAT1 Y01 sing 483 n n 
CAT HAT2 Y01 sing 484 n n 
CAR HAR1 Y01 sing 485 n n 
CAR HAR2 Y01 sing 486 n n 
CAM HAM1 Y01 sing 487 n n 
CAM HAM2 Y01 sing 488 n n 
CAL HAL1 Y01 sing 489 n n 
CAL HAL2 Y01 sing 490 n n 
OAH HAH Y01 sing 491 n n 
#
_atom_sites.entry_id                     7QBI 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 NAG A 1 501 303 NAG NAG . 
F 3 NAG A 1 502 304 NAG NAG . 
G 4 Y01 A 1 503 1 Y01 Y01 . 
H 4 Y01 A 1 504 2 Y01 Y01 . 
I 4 Y01 A 1 505 6 Y01 Y01 . 
J 4 Y01 A 1 506 3 Y01 Y01 . 
K 4 Y01 I 1 101 2 Y01 Y01 . 
L 4 Y01 I 1 102 3 Y01 Y01 . 
M 4 Y01 K 1 101 3 Y01 Y01 . 
N 4 Y01 K 1 102 3 Y01 Y01 . 
O 3 NAG B 1 501 304 NAG NAG . 
P 3 NAG B 1 502 305 NAG NAG . 
Q 4 Y01 B 1 503 1 Y01 Y01 . 
R 4 Y01 B 1 504 1 Y01 Y01 . 
S 4 Y01 B 1 505 4 Y01 Y01 . 
T 4 Y01 B 1 506 3 Y01 Y01 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . H 4 133.064 125.116 132.799 1 43.09 ? CAA Y01 504 A 1 
HETATM 2 C CBA Y01 . . . H 4 131.687 125.462 132.251 1 43.09 ? CBA Y01 504 A 1 
HETATM 3 C CAB Y01 . . . H 4 131.057 126.575 133.072 1 43.09 ? CAB Y01 504 A 1 
HETATM 4 C CAN Y01 . . . H 4 130.781 124.229 132.2 1 43.09 ? CAN Y01 504 A 1 
HETATM 5 C CAJ Y01 . . . H 4 131.107 123.219 131.122 1 43.09 ? CAJ Y01 504 A 1 
HETATM 6 C CAO Y01 . . . H 4 130.566 123.602 129.756 1 43.09 ? CAO Y01 504 A 1 
HETATM 7 C CBB Y01 . . . H 4 131.196 122.867 128.556 1 43.09 ? CBB Y01 504 A 1 
HETATM 8 C CAC Y01 . . . H 4 131.457 121.4 128.894 1 43.09 ? CAC Y01 504 A 1 
HETATM 9 C CBE Y01 . . . H 4 130.315 123.051 127.297 1 43.09 ? CBE Y01 504 A 1 
HETATM 10 C CAP Y01 . . . H 4 130.059 124.556 126.991 1 43.09 ? CAP Y01 504 A 1 
HETATM 11 C CAQ Y01 . . . H 4 130.109 124.73 125.468 1 43.09 ? CAQ Y01 504 A 1 
HETATM 12 C CBG Y01 . . . H 4 129.942 123.313 124.946 1 43.09 ? CBG Y01 504 A 1 
HETATM 13 C CBI Y01 . . . H 4 130.775 122.453 125.922 1 43.09 ? CBI Y01 504 A 1 
HETATM 14 C CAE Y01 . . . H 4 132.293 122.657 125.749 1 43.09 ? CAE Y01 504 A 1 
HETATM 15 C CAU Y01 . . . H 4 130.384 120.998 125.634 1 43.09 ? CAU Y01 504 A 1 
HETATM 16 C CAS Y01 . . . H 4 130.641 120.619 124.171 1 43.09 ? CAS Y01 504 A 1 
HETATM 17 C CBF Y01 . . . H 4 129.944 121.55 123.157 1 43.09 ? CBF Y01 504 A 1 
HETATM 18 C CBD Y01 . . . H 4 130.19 123.041 123.465 1 43.09 ? CBD Y01 504 A 1 
HETATM 19 C CAK Y01 . . . H 4 129.276 123.902 122.6 1 43.09 ? CAK Y01 504 A 1 
HETATM 20 C CAI Y01 . . . H 4 129.158 123.398 121.196 1 43.09 ? CAI Y01 504 A 1 
HETATM 21 C CAZ Y01 . . . H 4 129.645 122.247 120.751 1 43.09 ? CAZ Y01 504 A 1 
HETATM 22 C CAV Y01 . . . H 4 129.6 121.908 119.273 1 43.09 ? CAV Y01 504 A 1 
HETATM 23 C CBH Y01 . . . H 4 130.259 121.194 121.669 1 43.09 ? CBH Y01 504 A 1 
HETATM 24 C CAD Y01 . . . H 4 131.776 121.147 121.396 1 43.09 ? CAD Y01 504 A 1 
HETATM 25 C CAT Y01 . . . H 4 129.629 119.826 121.327 1 43.09 ? CAT Y01 504 A 1 
HETATM 26 C CAR Y01 . . . H 4 129.643 119.491 119.835 1 43.09 ? CAR Y01 504 A 1 
HETATM 27 C CBC Y01 . . . H 4 128.953 120.559 119.026 1 43.09 ? CBC Y01 504 A 1 
HETATM 28 O OAW Y01 . . . H 4 129.087 120.222 117.611 1 43.09 ? OAW Y01 504 A 1 
HETATM 29 C CAY Y01 . . . H 4 128.449 120.973 116.718 1 43.09 ? CAY Y01 504 A 1 
HETATM 30 O OAG Y01 . . . H 4 127.613 121.778 117.004 1 43.09 ? OAG Y01 504 A 1 
HETATM 31 C CAM Y01 . . . H 4 128.92 120.706 115.316 1 43.09 ? CAM Y01 504 A 1 
HETATM 32 C CAL Y01 . . . H 4 127.819 120.413 114.316 1 43.09 ? CAL Y01 504 A 1 
HETATM 33 C CAX Y01 . . . H 4 128.292 120.289 112.878 1 43.09 ? CAX Y01 504 A 1 
HETATM 34 O OAH Y01 . . . H 4 127.833 121.087 112.036 1 43.09 ? OAH Y01 504 A 1 
HETATM 35 O OAF Y01 . . . H 4 129.118 119.397 112.603 1 43.09 ? OAF Y01 504 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           35 
#