data_7QCQ # _model_server_result.job_id GGCkqgMT705s5n50Pt_Y-A _model_server_result.datetime_utc '2024-10-20 20:03:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qcq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7QCQ # _exptl.entry_id 7QCQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7QCQ _cell.length_a 135.469 _cell.length_b 135.469 _cell.length_c 35.579 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QCQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 AAA CYS 24 1_555 A SG CYS 99 AAA CYS 99 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.118 ? disulf ? disulf2 A SG CYS 24 AAA CYS 24 1_555 A SG CYS 99 AAA CYS 99 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.19 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7QCQ _atom_sites.fract_transf_matrix[1][1] 0.007382 _atom_sites.fract_transf_matrix[1][2] 0.004262 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008524 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028106 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL AAA 1 201 201 GOL GOL . D 3 GOL AAA 1 202 202 GOL GOL . E 4 HOH AAA 1 301 7 HOH HOH . E 4 HOH AAA 2 302 57 HOH HOH . E 4 HOH AAA 3 303 112 HOH HOH . E 4 HOH AAA 4 304 73 HOH HOH . E 4 HOH AAA 5 305 70 HOH HOH . E 4 HOH AAA 6 306 102 HOH HOH . E 4 HOH AAA 7 307 62 HOH HOH . E 4 HOH AAA 8 308 42 HOH HOH . E 4 HOH AAA 9 309 49 HOH HOH . E 4 HOH AAA 10 310 71 HOH HOH . E 4 HOH AAA 11 311 51 HOH HOH . E 4 HOH AAA 12 312 24 HOH HOH . E 4 HOH AAA 13 313 21 HOH HOH . E 4 HOH AAA 14 314 87 HOH HOH . E 4 HOH AAA 15 315 33 HOH HOH . E 4 HOH AAA 16 316 14 HOH HOH . E 4 HOH AAA 17 317 27 HOH HOH . E 4 HOH AAA 18 318 32 HOH HOH . E 4 HOH AAA 19 319 120 HOH HOH . E 4 HOH AAA 20 320 22 HOH HOH . E 4 HOH AAA 21 321 38 HOH HOH . E 4 HOH AAA 22 322 50 HOH HOH . E 4 HOH AAA 23 323 13 HOH HOH . E 4 HOH AAA 24 324 19 HOH HOH . E 4 HOH AAA 25 325 40 HOH HOH . E 4 HOH AAA 26 326 15 HOH HOH . E 4 HOH AAA 27 327 17 HOH HOH . E 4 HOH AAA 28 328 54 HOH HOH . E 4 HOH AAA 29 329 37 HOH HOH . E 4 HOH AAA 30 330 55 HOH HOH . E 4 HOH AAA 31 331 16 HOH HOH . E 4 HOH AAA 32 332 61 HOH HOH . E 4 HOH AAA 33 333 2 HOH HOH . E 4 HOH AAA 34 334 113 HOH HOH . E 4 HOH AAA 35 335 58 HOH HOH . E 4 HOH AAA 36 336 34 HOH HOH . E 4 HOH AAA 37 337 106 HOH HOH . E 4 HOH AAA 38 338 46 HOH HOH . E 4 HOH AAA 39 339 10 HOH HOH . E 4 HOH AAA 40 340 12 HOH HOH . E 4 HOH AAA 41 341 99 HOH HOH . E 4 HOH AAA 42 342 86 HOH HOH . E 4 HOH AAA 43 343 97 HOH HOH . E 4 HOH AAA 44 344 28 HOH HOH . E 4 HOH AAA 45 345 20 HOH HOH . E 4 HOH AAA 46 346 44 HOH HOH . E 4 HOH AAA 47 347 65 HOH HOH . E 4 HOH AAA 48 348 105 HOH HOH . E 4 HOH AAA 49 349 18 HOH HOH . E 4 HOH AAA 50 350 29 HOH HOH . E 4 HOH AAA 51 351 43 HOH HOH . E 4 HOH AAA 52 352 11 HOH HOH . E 4 HOH AAA 53 353 5 HOH HOH . E 4 HOH AAA 54 354 114 HOH HOH . E 4 HOH AAA 55 355 35 HOH HOH . E 4 HOH AAA 56 356 47 HOH HOH . E 4 HOH AAA 57 357 119 HOH HOH . E 4 HOH AAA 58 358 8 HOH HOH . E 4 HOH AAA 59 359 39 HOH HOH . E 4 HOH AAA 60 360 116 HOH HOH . E 4 HOH AAA 61 361 100 HOH HOH . E 4 HOH AAA 62 362 69 HOH HOH . E 4 HOH AAA 63 363 96 HOH HOH . E 4 HOH AAA 64 364 103 HOH HOH . E 4 HOH AAA 65 365 80 HOH HOH . E 4 HOH AAA 66 366 101 HOH HOH . E 4 HOH AAA 67 367 6 HOH HOH . E 4 HOH AAA 68 368 45 HOH HOH . E 4 HOH AAA 69 369 68 HOH HOH . E 4 HOH AAA 70 370 110 HOH HOH . E 4 HOH AAA 71 371 91 HOH HOH . E 4 HOH AAA 72 372 52 HOH HOH . E 4 HOH AAA 73 373 9 HOH HOH . E 4 HOH AAA 74 374 76 HOH HOH . E 4 HOH AAA 75 375 3 HOH HOH . E 4 HOH AAA 76 376 53 HOH HOH . E 4 HOH AAA 77 377 77 HOH HOH . E 4 HOH AAA 78 378 59 HOH HOH . E 4 HOH AAA 79 379 56 HOH HOH . E 4 HOH AAA 80 380 107 HOH HOH . E 4 HOH AAA 81 381 30 HOH HOH . E 4 HOH AAA 82 382 79 HOH HOH . E 4 HOH AAA 83 383 48 HOH HOH . E 4 HOH AAA 84 384 78 HOH HOH . E 4 HOH AAA 85 385 93 HOH HOH . E 4 HOH AAA 86 386 36 HOH HOH . E 4 HOH AAA 87 387 31 HOH HOH . E 4 HOH AAA 88 388 67 HOH HOH . E 4 HOH AAA 89 389 90 HOH HOH . E 4 HOH AAA 90 390 83 HOH HOH . E 4 HOH AAA 91 391 122 HOH HOH . E 4 HOH AAA 92 392 94 HOH HOH . E 4 HOH AAA 93 393 108 HOH HOH . E 4 HOH AAA 94 394 117 HOH HOH . E 4 HOH AAA 95 395 81 HOH HOH . E 4 HOH AAA 96 396 82 HOH HOH . E 4 HOH AAA 97 397 41 HOH HOH . E 4 HOH AAA 98 398 92 HOH HOH . E 4 HOH AAA 99 399 74 HOH HOH . E 4 HOH AAA 100 400 75 HOH HOH . E 4 HOH AAA 101 401 115 HOH HOH . F 4 HOH BBB 1 401 109 HOH HOH . F 4 HOH BBB 2 402 121 HOH HOH . F 4 HOH BBB 3 403 26 HOH HOH . F 4 HOH BBB 4 404 60 HOH HOH . F 4 HOH BBB 5 405 84 HOH HOH . F 4 HOH BBB 6 406 63 HOH HOH . F 4 HOH BBB 7 407 64 HOH HOH . F 4 HOH BBB 8 408 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -37.629 -49.728 -5.65 1 80.99 0 C1 GOL 201 AAA 1 HETATM 2 O O1 GOL . . . C 3 -36.995 -51.005 -5.595 1 79.4 0 O1 GOL 201 AAA 1 HETATM 3 C C2 GOL . . . C 3 -38.791 -49.619 -4.675 1 80.64 0 C2 GOL 201 AAA 1 HETATM 4 O O2 GOL . . . C 3 -38.47 -50.276 -3.451 1 76.41 0 O2 GOL 201 AAA 1 HETATM 5 C C3 GOL . . . C 3 -39.193 -48.189 -4.364 1 76.53 0 C3 GOL 201 AAA 1 HETATM 6 O O3 GOL . . . C 3 -40.497 -47.879 -4.85 1 76.91 0 O3 GOL 201 AAA 1 HETATM 7 H H11 GOL . . . C 3 -37.963 -49.572 -6.567 1 80.53 0 H11 GOL 201 AAA 1 HETATM 8 H H12 GOL . . . C 3 -36.964 -49.028 -5.441 1 80.52 0 H12 GOL 201 AAA 1 HETATM 9 H HO1 GOL . . . C 3 -36.371 -50.893 -6.117 0 77.34 0 HO1 GOL 201 AAA 1 HETATM 10 H H2 GOL . . . C 3 -39.567 -50.076 -5.076 1 79.03 0 H2 GOL 201 AAA 1 HETATM 11 H HO2 GOL . . . C 3 -38.598 -49.813 -2.782 0 76.37 0 HO2 GOL 201 AAA 1 HETATM 12 H H31 GOL . . . C 3 -38.539 -47.572 -4.771 1 77.4 0 H31 GOL 201 AAA 1 HETATM 13 H H32 GOL . . . C 3 -39.174 -48.054 -3.384 1 77.53 0 H32 GOL 201 AAA 1 HETATM 14 H HO3 GOL . . . C 3 -40.527 -48.083 -5.687 1 76.81 0 HO3 GOL 201 AAA 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 14 #