data_7QDQ
#
_model_server_result.job_id            xhMQ7TIofuVCKbQ2svi0Ug 
_model_server_result.datetime_utc      '2024-11-13 03:13:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7qdq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":208}' 
#
_entry.id    7QDQ 
#
_exptl.entry_id    7QDQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          6 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7QDQ 
_cell.length_a            41.641 
_cell.length_b            43.675 
_cell.length_c            53.351 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QDQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 I N N 
? 6 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 44 A THR 63 1_555 F NA NA . A NA 205 4_455 ? A ? ? ? ? ? ? ? ? ? ? 3.185 ? 
metalc ? metalc2 A OD2 ASP 49 A ASP 68 1_555 E NA NA . A NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? 
metalc ? metalc3 A OH TYR 57 A TYR 76 1_555 E NA NA . A NA 204 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc4 A O THR 82 A THR 101 1_555 E NA NA . A NA 204 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 3.005 ? 
metalc ? metalc5 A O VAL 90 A VAL 109 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? 
metalc ? metalc6 F NA NA . A NA 205 1_555 K O HOH . A HOH 309 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? 
metalc ? metalc7 F NA NA . A NA 205 1_555 K O HOH . A HOH 326 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.963 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 157 n n 
S C1 DMS sing 158 n n 
S C2 DMS sing 159 n n 
C1 H11 DMS sing 160 n n 
C1 H12 DMS sing 161 n n 
C1 H13 DMS sing 162 n n 
C2 H21 DMS sing 163 n n 
C2 H22 DMS sing 164 n n 
C2 H23 DMS sing 165 n n 
#
_atom_sites.entry_id                     7QDQ 
_atom_sites.fract_transf_matrix[1][1]    0.024015 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022896 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018744 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 201 1 CL CL . 
C 2 CL A 1 202 2 CL CL . 
D 2 CL A 1 203 3 CL CL . 
E 3 NA A 1 204 4 NA NA . 
F 3 NA A 1 205 5 NA NA . 
G 4 SO4 A 1 206 6 SO4 SO4 . 
H 5 AU0 A 1 207 7 AU0 J . 
I 6 DMS A 1 208 8 DMS DMS . 
J 6 DMS A 1 209 9 DMS DMS . 
K 7 HOH A 1 301 50 HOH HOH . 
K 7 HOH A 2 302 47 HOH HOH . 
K 7 HOH A 3 303 86 HOH HOH . 
K 7 HOH A 4 304 97 HOH HOH . 
K 7 HOH A 5 305 31 HOH HOH . 
K 7 HOH A 6 306 95 HOH HOH . 
K 7 HOH A 7 307 54 HOH HOH . 
K 7 HOH A 8 308 102 HOH HOH . 
K 7 HOH A 9 309 4 HOH HOH . 
K 7 HOH A 10 310 101 HOH HOH . 
K 7 HOH A 11 311 8 HOH HOH . 
K 7 HOH A 12 312 33 HOH HOH . 
K 7 HOH A 13 313 3 HOH HOH . 
K 7 HOH A 14 314 2 HOH HOH . 
K 7 HOH A 15 315 9 HOH HOH . 
K 7 HOH A 16 316 11 HOH HOH . 
K 7 HOH A 17 317 44 HOH HOH . 
K 7 HOH A 18 318 10 HOH HOH . 
K 7 HOH A 19 319 27 HOH HOH . 
K 7 HOH A 20 320 25 HOH HOH . 
K 7 HOH A 21 321 49 HOH HOH . 
K 7 HOH A 22 322 57 HOH HOH . 
K 7 HOH A 23 323 78 HOH HOH . 
K 7 HOH A 24 324 51 HOH HOH . 
K 7 HOH A 25 325 26 HOH HOH . 
K 7 HOH A 26 326 13 HOH HOH . 
K 7 HOH A 27 327 5 HOH HOH . 
K 7 HOH A 28 328 55 HOH HOH . 
K 7 HOH A 29 329 42 HOH HOH . 
K 7 HOH A 30 330 28 HOH HOH . 
K 7 HOH A 31 331 18 HOH HOH . 
K 7 HOH A 32 332 14 HOH HOH . 
K 7 HOH A 33 333 45 HOH HOH . 
K 7 HOH A 34 334 19 HOH HOH . 
K 7 HOH A 35 335 12 HOH HOH . 
K 7 HOH A 36 336 38 HOH HOH . 
K 7 HOH A 37 337 17 HOH HOH . 
K 7 HOH A 38 338 22 HOH HOH . 
K 7 HOH A 39 339 89 HOH HOH . 
K 7 HOH A 40 340 30 HOH HOH . 
K 7 HOH A 41 341 72 HOH HOH . 
K 7 HOH A 42 342 34 HOH HOH . 
K 7 HOH A 43 343 16 HOH HOH . 
K 7 HOH A 44 344 66 HOH HOH . 
K 7 HOH A 45 345 6 HOH HOH . 
K 7 HOH A 46 346 35 HOH HOH . 
K 7 HOH A 47 347 106 HOH HOH . 
K 7 HOH A 48 348 15 HOH HOH . 
K 7 HOH A 49 349 39 HOH HOH . 
K 7 HOH A 50 350 61 HOH HOH . 
K 7 HOH A 51 351 29 HOH HOH . 
K 7 HOH A 52 352 107 HOH HOH . 
K 7 HOH A 53 353 69 HOH HOH . 
K 7 HOH A 54 354 58 HOH HOH . 
K 7 HOH A 55 355 1 HOH HOH . 
K 7 HOH A 56 356 7 HOH HOH . 
K 7 HOH A 57 357 82 HOH HOH . 
K 7 HOH A 58 358 40 HOH HOH . 
K 7 HOH A 59 359 37 HOH HOH . 
K 7 HOH A 60 360 48 HOH HOH . 
K 7 HOH A 61 361 68 HOH HOH . 
K 7 HOH A 62 362 24 HOH HOH . 
K 7 HOH A 63 363 74 HOH HOH . 
K 7 HOH A 64 364 43 HOH HOH . 
K 7 HOH A 65 365 81 HOH HOH . 
K 7 HOH A 66 366 77 HOH HOH . 
K 7 HOH A 67 367 88 HOH HOH . 
K 7 HOH A 68 368 56 HOH HOH . 
K 7 HOH A 69 369 104 HOH HOH . 
K 7 HOH A 70 370 67 HOH HOH . 
K 7 HOH A 71 371 94 HOH HOH . 
K 7 HOH A 72 372 71 HOH HOH . 
K 7 HOH A 73 373 84 HOH HOH . 
K 7 HOH A 74 374 103 HOH HOH . 
K 7 HOH A 75 375 46 HOH HOH . 
K 7 HOH A 76 376 41 HOH HOH . 
K 7 HOH A 77 377 36 HOH HOH . 
K 7 HOH A 78 378 53 HOH HOH . 
K 7 HOH A 79 379 32 HOH HOH . 
K 7 HOH A 80 380 52 HOH HOH . 
K 7 HOH A 81 381 99 HOH HOH . 
K 7 HOH A 82 382 85 HOH HOH . 
K 7 HOH A 83 383 79 HOH HOH . 
K 7 HOH A 84 384 90 HOH HOH . 
K 7 HOH A 85 385 73 HOH HOH . 
K 7 HOH A 86 386 80 HOH HOH . 
K 7 HOH A 87 387 60 HOH HOH . 
K 7 HOH A 88 388 21 HOH HOH . 
K 7 HOH A 89 389 23 HOH HOH . 
K 7 HOH A 90 390 91 HOH HOH . 
K 7 HOH A 91 391 20 HOH HOH . 
K 7 HOH A 92 392 83 HOH HOH . 
K 7 HOH A 93 393 70 HOH HOH . 
K 7 HOH A 94 394 76 HOH HOH . 
K 7 HOH A 95 395 65 HOH HOH . 
K 7 HOH A 96 396 100 HOH HOH . 
K 7 HOH A 97 397 64 HOH HOH . 
K 7 HOH A 98 398 59 HOH HOH . 
K 7 HOH A 99 399 75 HOH HOH . 
K 7 HOH A 100 400 62 HOH HOH . 
K 7 HOH A 101 401 98 HOH HOH . 
K 7 HOH A 102 402 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . I 6 -0.786 15.719 -20.481 1 51.8 ? S DMS 208 A 1 
HETATM 2 O O DMS . . . I 6 -1.608 16.809 -21.094 1 30.83 ? O DMS 208 A 1 
HETATM 3 C C1 DMS . . . I 6 -1.929 14.336 -20.162 1 13.5 ? C1 DMS 208 A 1 
HETATM 4 C C2 DMS . . . I 6 -0.086 16.271 -18.876 1 10.58 ? C2 DMS 208 A 1 
HETATM 5 H H11 DMS . . . I 6 -1.375 13.475 -19.891 1 16.2 ? H11 DMS 208 A 1 
HETATM 6 H H12 DMS . . . I 6 -2.491 14.133 -21.037 1 16.2 ? H12 DMS 208 A 1 
HETATM 7 H H13 DMS . . . I 6 -2.586 14.596 -19.373 1 16.2 ? H13 DMS 208 A 1 
HETATM 8 H H21 DMS . . . I 6 0.916 15.939 -18.795 1 12.7 ? H21 DMS 208 A 1 
HETATM 9 H H22 DMS . . . I 6 -0.658 15.864 -18.083 1 12.7 ? H22 DMS 208 A 1 
HETATM 10 H H23 DMS . . . I 6 -0.113 17.328 -18.824 1 12.7 ? H23 DMS 208 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           44 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#