data_7QFB
#
_model_server_result.job_id            8UvIwtvjemwQGMzCgKb6-Q 
_model_server_result.datetime_utc      '2024-12-28 06:38:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7qfb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    7QFB 
#
_exptl.entry_id    7QFB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7QFB 
_cell.length_a            66.382 
_cell.length_b            68.338 
_cell.length_c            119.78 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QFB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 91 A ASP 92 1_555 K MN MN . A MN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc2 A OD2 ASP 91 A ASP 92 1_555 L MN MN . A MN 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? 
metalc ? metalc3 A OD1 ASN 123 A ASN 124 1_555 K MN MN . A MN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc4 A NE2 HIS 172 A HIS 173 1_555 K MN MN . A MN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc5 A ND1 HIS 247 A HIS 248 1_555 K MN MN . A MN 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc6 A O HIS 247 A HIS 248 1_555 L MN MN . A MN 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
metalc ? metalc7 K MN MN . A MN 409 1_555 M O4 SO4 . A SO4 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc8 L MN MN . A MN 410 1_555 M O1 SO4 . A SO4 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7QFB 
_atom_sites.fract_transf_matrix[1][1]    0.015064 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014633 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008349 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 401 401 GOL GOL . 
D 3 GOL A 1 402 501 GOL GOL . 
E 3 GOL A 1 403 601 GOL GOL . 
F 3 GOL A 1 404 701 GOL GOL . 
G 3 GOL A 1 405 801 GOL GOL . 
H 3 GOL A 1 406 901 GOL GOL . 
I 3 GOL A 1 407 1001 GOL GOL . 
J 3 GOL A 1 408 1101 GOL GOL . 
K 4 MN A 1 409 1 MN MN . 
L 4 MN A 1 410 2 MN MN . 
M 5 SO4 A 1 411 1 SO4 SO4 . 
N 5 SO4 A 1 412 3 SO4 SO4 . 
O 5 SO4 B 1 201 2 SO4 SO4 . 
P 6 HOH A 1 501 134 HOH HOH . 
P 6 HOH A 2 502 61 HOH HOH . 
P 6 HOH A 3 503 117 HOH HOH . 
P 6 HOH A 4 504 136 HOH HOH . 
P 6 HOH A 5 505 103 HOH HOH . 
P 6 HOH A 6 506 20 HOH HOH . 
P 6 HOH A 7 507 32 HOH HOH . 
P 6 HOH A 8 508 22 HOH HOH . 
P 6 HOH A 9 509 36 HOH HOH . 
P 6 HOH A 10 510 47 HOH HOH . 
P 6 HOH A 11 511 3 HOH HOH . 
P 6 HOH A 12 512 54 HOH HOH . 
P 6 HOH A 13 513 124 HOH HOH . 
P 6 HOH A 14 514 12 HOH HOH . 
P 6 HOH A 15 515 94 HOH HOH . 
P 6 HOH A 16 516 82 HOH HOH . 
P 6 HOH A 17 517 63 HOH HOH . 
P 6 HOH A 18 518 68 HOH HOH . 
P 6 HOH A 19 519 13 HOH HOH . 
P 6 HOH A 20 520 39 HOH HOH . 
P 6 HOH A 21 521 11 HOH HOH . 
P 6 HOH A 22 522 17 HOH HOH . 
P 6 HOH A 23 523 30 HOH HOH . 
P 6 HOH A 24 524 27 HOH HOH . 
P 6 HOH A 25 525 35 HOH HOH . 
P 6 HOH A 26 526 131 HOH HOH . 
P 6 HOH A 27 527 19 HOH HOH . 
P 6 HOH A 28 528 50 HOH HOH . 
P 6 HOH A 29 529 25 HOH HOH . 
P 6 HOH A 30 530 21 HOH HOH . 
P 6 HOH A 31 531 95 HOH HOH . 
P 6 HOH A 32 532 49 HOH HOH . 
P 6 HOH A 33 533 112 HOH HOH . 
P 6 HOH A 34 534 76 HOH HOH . 
P 6 HOH A 35 535 4 HOH HOH . 
P 6 HOH A 36 536 45 HOH HOH . 
P 6 HOH A 37 537 6 HOH HOH . 
P 6 HOH A 38 538 5 HOH HOH . 
P 6 HOH A 39 539 81 HOH HOH . 
P 6 HOH A 40 540 31 HOH HOH . 
P 6 HOH A 41 541 78 HOH HOH . 
P 6 HOH A 42 542 56 HOH HOH . 
P 6 HOH A 43 543 18 HOH HOH . 
P 6 HOH A 44 544 77 HOH HOH . 
P 6 HOH A 45 545 137 HOH HOH . 
P 6 HOH A 46 546 126 HOH HOH . 
P 6 HOH A 47 547 40 HOH HOH . 
P 6 HOH A 48 548 2 HOH HOH . 
P 6 HOH A 49 549 66 HOH HOH . 
P 6 HOH A 50 550 92 HOH HOH . 
P 6 HOH A 51 551 16 HOH HOH . 
P 6 HOH A 52 552 23 HOH HOH . 
P 6 HOH A 53 553 44 HOH HOH . 
P 6 HOH A 54 554 26 HOH HOH . 
P 6 HOH A 55 555 1 HOH HOH . 
P 6 HOH A 56 556 87 HOH HOH . 
P 6 HOH A 57 557 14 HOH HOH . 
P 6 HOH A 58 558 10 HOH HOH . 
P 6 HOH A 59 559 70 HOH HOH . 
P 6 HOH A 60 560 8 HOH HOH . 
P 6 HOH A 61 561 53 HOH HOH . 
P 6 HOH A 62 562 7 HOH HOH . 
P 6 HOH A 63 563 15 HOH HOH . 
P 6 HOH A 64 564 107 HOH HOH . 
P 6 HOH A 65 565 72 HOH HOH . 
P 6 HOH A 66 566 67 HOH HOH . 
P 6 HOH A 67 567 86 HOH HOH . 
P 6 HOH A 68 568 59 HOH HOH . 
P 6 HOH A 69 569 65 HOH HOH . 
P 6 HOH A 70 570 57 HOH HOH . 
P 6 HOH A 71 571 140 HOH HOH . 
P 6 HOH A 72 572 28 HOH HOH . 
P 6 HOH A 73 573 83 HOH HOH . 
P 6 HOH A 74 574 9 HOH HOH . 
P 6 HOH A 75 575 122 HOH HOH . 
P 6 HOH A 76 576 148 HOH HOH . 
P 6 HOH A 77 577 37 HOH HOH . 
P 6 HOH A 78 578 75 HOH HOH . 
P 6 HOH A 79 579 152 HOH HOH . 
P 6 HOH A 80 580 60 HOH HOH . 
P 6 HOH A 81 581 46 HOH HOH . 
P 6 HOH A 82 582 48 HOH HOH . 
P 6 HOH A 83 583 64 HOH HOH . 
P 6 HOH A 84 584 73 HOH HOH . 
P 6 HOH A 85 585 144 HOH HOH . 
P 6 HOH A 86 586 108 HOH HOH . 
P 6 HOH A 87 587 121 HOH HOH . 
P 6 HOH A 88 588 80 HOH HOH . 
P 6 HOH A 89 589 24 HOH HOH . 
P 6 HOH A 90 590 101 HOH HOH . 
P 6 HOH A 91 591 120 HOH HOH . 
P 6 HOH A 92 592 151 HOH HOH . 
P 6 HOH A 93 593 139 HOH HOH . 
P 6 HOH A 94 594 55 HOH HOH . 
P 6 HOH A 95 595 123 HOH HOH . 
P 6 HOH A 96 596 161 HOH HOH . 
P 6 HOH A 97 597 74 HOH HOH . 
P 6 HOH A 98 598 33 HOH HOH . 
P 6 HOH A 99 599 41 HOH HOH . 
P 6 HOH A 100 600 132 HOH HOH . 
P 6 HOH A 101 601 125 HOH HOH . 
P 6 HOH A 102 602 100 HOH HOH . 
P 6 HOH A 103 603 157 HOH HOH . 
P 6 HOH A 104 604 58 HOH HOH . 
P 6 HOH A 105 605 159 HOH HOH . 
P 6 HOH A 106 606 97 HOH HOH . 
P 6 HOH A 107 607 69 HOH HOH . 
P 6 HOH A 108 608 141 HOH HOH . 
P 6 HOH A 109 609 38 HOH HOH . 
P 6 HOH A 110 610 106 HOH HOH . 
P 6 HOH A 111 611 91 HOH HOH . 
P 6 HOH A 112 612 145 HOH HOH . 
P 6 HOH A 113 613 93 HOH HOH . 
P 6 HOH A 114 614 110 HOH HOH . 
P 6 HOH A 115 615 153 HOH HOH . 
P 6 HOH A 116 616 99 HOH HOH . 
P 6 HOH A 117 617 105 HOH HOH . 
P 6 HOH A 118 618 29 HOH HOH . 
P 6 HOH A 119 619 146 HOH HOH . 
P 6 HOH A 120 620 62 HOH HOH . 
P 6 HOH A 121 621 118 HOH HOH . 
P 6 HOH A 122 622 133 HOH HOH . 
P 6 HOH A 123 623 135 HOH HOH . 
P 6 HOH A 124 624 127 HOH HOH . 
P 6 HOH A 125 625 142 HOH HOH . 
P 6 HOH A 126 626 113 HOH HOH . 
P 6 HOH A 127 627 143 HOH HOH . 
P 6 HOH A 128 628 51 HOH HOH . 
P 6 HOH A 129 629 96 HOH HOH . 
P 6 HOH A 130 630 116 HOH HOH . 
P 6 HOH A 131 631 130 HOH HOH . 
P 6 HOH A 132 632 114 HOH HOH . 
P 6 HOH A 133 633 89 HOH HOH . 
P 6 HOH A 134 634 71 HOH HOH . 
P 6 HOH A 135 635 43 HOH HOH . 
P 6 HOH A 136 636 102 HOH HOH . 
P 6 HOH A 137 637 104 HOH HOH . 
P 6 HOH A 138 638 88 HOH HOH . 
P 6 HOH A 139 639 98 HOH HOH . 
P 6 HOH A 140 640 155 HOH HOH . 
P 6 HOH A 141 641 158 HOH HOH . 
P 6 HOH A 142 642 129 HOH HOH . 
P 6 HOH A 143 643 163 HOH HOH . 
P 6 HOH A 144 644 90 HOH HOH . 
P 6 HOH A 145 645 52 HOH HOH . 
P 6 HOH A 146 646 128 HOH HOH . 
P 6 HOH A 147 647 109 HOH HOH . 
P 6 HOH A 148 648 119 HOH HOH . 
P 6 HOH A 149 649 154 HOH HOH . 
P 6 HOH A 150 650 162 HOH HOH . 
P 6 HOH A 151 651 149 HOH HOH . 
P 6 HOH A 152 652 156 HOH HOH . 
P 6 HOH A 153 653 111 HOH HOH . 
P 6 HOH A 154 654 138 HOH HOH . 
Q 6 HOH B 1 301 147 HOH HOH . 
Q 6 HOH B 2 302 34 HOH HOH . 
Q 6 HOH B 3 303 85 HOH HOH . 
Q 6 HOH B 4 304 79 HOH HOH . 
Q 6 HOH B 5 305 115 HOH HOH . 
Q 6 HOH B 6 306 84 HOH HOH . 
Q 6 HOH B 7 307 160 HOH HOH . 
Q 6 HOH B 8 308 150 HOH HOH . 
Q 6 HOH B 9 309 42 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 5.061 10.223 18.032 1 69.01 ? C1 GOL 401 A 1 
HETATM 2 O O1 GOL . . . C 3 5.531 9.785 19.288 1 73.87 ? O1 GOL 401 A 1 
HETATM 3 C C2 GOL . . . C 3 3.597 9.831 17.916 1 61.46 ? C2 GOL 401 A 1 
HETATM 4 O O2 GOL . . . C 3 3.483 8.523 18.401 1 60.27 ? O2 GOL 401 A 1 
HETATM 5 C C3 GOL . . . C 3 2.756 10.712 18.825 1 58.85 ? C3 GOL 401 A 1 
HETATM 6 O O3 GOL . . . C 3 1.517 10.079 19.044 1 53.88 ? O3 GOL 401 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#