data_7QGJ
#
_model_server_result.job_id            E33t38sKV70GySzfvjDEvw 
_model_server_result.datetime_utc      '2024-10-19 03:48:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7qgj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":304}' 
#
_entry.id    7QGJ 
#
_exptl.entry_id    7QGJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7QGJ 
_cell.length_a            87.241 
_cell.length_b            87.241 
_cell.length_c            59.625 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QGJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,N 1 1 
B,J,K,L,M,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 47 A CYS 220 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc2 A SG CYS 50 A CYS 223 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc3 A NE2 HIS 67 A HIS 240 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc4 A SG CYS 74 A CYS 247 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc5 B SG CYS 47 B CYS 220 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc6 B SG CYS 50 B CYS 223 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc7 B NE2 HIS 67 B HIS 240 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc8 B SG CYS 74 B CYS 247 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7QGJ 
_atom_sites.fract_transf_matrix[1][1]    0.011463 
_atom_sites.fract_transf_matrix[1][2]    0.006618 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013236 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016771 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 301 1 ZN ZN . 
D 3 EDO A 1 302 2 EDO EDO . 
E 3 EDO A 1 303 4 EDO EDO . 
F 3 EDO A 1 304 5 EDO EDO . 
G 3 EDO A 1 305 7 EDO EDO . 
H 3 EDO A 1 306 9 EDO EDO . 
I 3 EDO A 1 307 10 EDO EDO . 
J 2 ZN B 1 301 2 ZN ZN . 
K 3 EDO B 1 302 1 EDO EDO . 
L 3 EDO B 1 303 3 EDO EDO . 
M 3 EDO B 1 304 6 EDO EDO . 
N 4 HOH A 1 401 128 HOH HOH . 
N 4 HOH A 2 402 34 HOH HOH . 
N 4 HOH A 3 403 82 HOH HOH . 
N 4 HOH A 4 404 11 HOH HOH . 
N 4 HOH A 5 405 13 HOH HOH . 
N 4 HOH A 6 406 58 HOH HOH . 
N 4 HOH A 7 407 45 HOH HOH . 
N 4 HOH A 8 408 9 HOH HOH . 
N 4 HOH A 9 409 78 HOH HOH . 
N 4 HOH A 10 410 15 HOH HOH . 
N 4 HOH A 11 411 43 HOH HOH . 
N 4 HOH A 12 412 121 HOH HOH . 
N 4 HOH A 13 413 99 HOH HOH . 
N 4 HOH A 14 414 141 HOH HOH . 
N 4 HOH A 15 415 107 HOH HOH . 
N 4 HOH A 16 416 35 HOH HOH . 
N 4 HOH A 17 417 102 HOH HOH . 
N 4 HOH A 18 418 85 HOH HOH . 
N 4 HOH A 19 419 100 HOH HOH . 
N 4 HOH A 20 420 96 HOH HOH . 
N 4 HOH A 21 421 72 HOH HOH . 
N 4 HOH A 22 422 95 HOH HOH . 
N 4 HOH A 23 423 117 HOH HOH . 
N 4 HOH A 24 424 23 HOH HOH . 
N 4 HOH A 25 425 44 HOH HOH . 
N 4 HOH A 26 426 37 HOH HOH . 
N 4 HOH A 27 427 8 HOH HOH . 
N 4 HOH A 28 428 131 HOH HOH . 
N 4 HOH A 29 429 54 HOH HOH . 
N 4 HOH A 30 430 81 HOH HOH . 
N 4 HOH A 31 431 28 HOH HOH . 
N 4 HOH A 32 432 32 HOH HOH . 
N 4 HOH A 33 433 119 HOH HOH . 
N 4 HOH A 34 434 38 HOH HOH . 
N 4 HOH A 35 435 80 HOH HOH . 
N 4 HOH A 36 436 73 HOH HOH . 
N 4 HOH A 37 437 5 HOH HOH . 
N 4 HOH A 38 438 50 HOH HOH . 
N 4 HOH A 39 439 56 HOH HOH . 
N 4 HOH A 40 440 127 HOH HOH . 
N 4 HOH A 41 441 104 HOH HOH . 
N 4 HOH A 42 442 42 HOH HOH . 
N 4 HOH A 43 443 77 HOH HOH . 
N 4 HOH A 44 444 25 HOH HOH . 
N 4 HOH A 45 445 134 HOH HOH . 
N 4 HOH A 46 446 63 HOH HOH . 
N 4 HOH A 47 447 33 HOH HOH . 
N 4 HOH A 48 448 129 HOH HOH . 
N 4 HOH A 49 449 51 HOH HOH . 
N 4 HOH A 50 450 6 HOH HOH . 
N 4 HOH A 51 451 69 HOH HOH . 
N 4 HOH A 52 452 135 HOH HOH . 
N 4 HOH A 53 453 112 HOH HOH . 
N 4 HOH A 54 454 109 HOH HOH . 
N 4 HOH A 55 455 46 HOH HOH . 
N 4 HOH A 56 456 97 HOH HOH . 
N 4 HOH A 57 457 130 HOH HOH . 
N 4 HOH A 58 458 90 HOH HOH . 
N 4 HOH A 59 459 57 HOH HOH . 
N 4 HOH A 60 460 126 HOH HOH . 
N 4 HOH A 61 461 70 HOH HOH . 
N 4 HOH A 62 462 132 HOH HOH . 
N 4 HOH A 63 463 29 HOH HOH . 
N 4 HOH A 64 464 55 HOH HOH . 
N 4 HOH A 65 465 116 HOH HOH . 
N 4 HOH A 66 466 67 HOH HOH . 
N 4 HOH A 67 467 59 HOH HOH . 
O 4 HOH B 1 401 120 HOH HOH . 
O 4 HOH B 2 402 71 HOH HOH . 
O 4 HOH B 3 403 26 HOH HOH . 
O 4 HOH B 4 404 111 HOH HOH . 
O 4 HOH B 5 405 24 HOH HOH . 
O 4 HOH B 6 406 14 HOH HOH . 
O 4 HOH B 7 407 139 HOH HOH . 
O 4 HOH B 8 408 138 HOH HOH . 
O 4 HOH B 9 409 30 HOH HOH . 
O 4 HOH B 10 410 93 HOH HOH . 
O 4 HOH B 11 411 53 HOH HOH . 
O 4 HOH B 12 412 86 HOH HOH . 
O 4 HOH B 13 413 122 HOH HOH . 
O 4 HOH B 14 414 16 HOH HOH . 
O 4 HOH B 15 415 125 HOH HOH . 
O 4 HOH B 16 416 7 HOH HOH . 
O 4 HOH B 17 417 65 HOH HOH . 
O 4 HOH B 18 418 88 HOH HOH . 
O 4 HOH B 19 419 17 HOH HOH . 
O 4 HOH B 20 420 1 HOH HOH . 
O 4 HOH B 21 421 142 HOH HOH . 
O 4 HOH B 22 422 79 HOH HOH . 
O 4 HOH B 23 423 133 HOH HOH . 
O 4 HOH B 24 424 20 HOH HOH . 
O 4 HOH B 25 425 18 HOH HOH . 
O 4 HOH B 26 426 12 HOH HOH . 
O 4 HOH B 27 427 89 HOH HOH . 
O 4 HOH B 28 428 62 HOH HOH . 
O 4 HOH B 29 429 3 HOH HOH . 
O 4 HOH B 30 430 118 HOH HOH . 
O 4 HOH B 31 431 94 HOH HOH . 
O 4 HOH B 32 432 68 HOH HOH . 
O 4 HOH B 33 433 83 HOH HOH . 
O 4 HOH B 34 434 60 HOH HOH . 
O 4 HOH B 35 435 91 HOH HOH . 
O 4 HOH B 36 436 92 HOH HOH . 
O 4 HOH B 37 437 39 HOH HOH . 
O 4 HOH B 38 438 101 HOH HOH . 
O 4 HOH B 39 439 84 HOH HOH . 
O 4 HOH B 40 440 47 HOH HOH . 
O 4 HOH B 41 441 123 HOH HOH . 
O 4 HOH B 42 442 52 HOH HOH . 
O 4 HOH B 43 443 27 HOH HOH . 
O 4 HOH B 44 444 22 HOH HOH . 
O 4 HOH B 45 445 19 HOH HOH . 
O 4 HOH B 46 446 4 HOH HOH . 
O 4 HOH B 47 447 87 HOH HOH . 
O 4 HOH B 48 448 48 HOH HOH . 
O 4 HOH B 49 449 124 HOH HOH . 
O 4 HOH B 50 450 41 HOH HOH . 
O 4 HOH B 51 451 49 HOH HOH . 
O 4 HOH B 52 452 74 HOH HOH . 
O 4 HOH B 53 453 36 HOH HOH . 
O 4 HOH B 54 454 75 HOH HOH . 
O 4 HOH B 55 455 31 HOH HOH . 
O 4 HOH B 56 456 98 HOH HOH . 
O 4 HOH B 57 457 40 HOH HOH . 
O 4 HOH B 58 458 2 HOH HOH . 
O 4 HOH B 59 459 103 HOH HOH . 
O 4 HOH B 60 460 10 HOH HOH . 
O 4 HOH B 61 461 64 HOH HOH . 
O 4 HOH B 62 462 137 HOH HOH . 
O 4 HOH B 63 463 114 HOH HOH . 
O 4 HOH B 64 464 113 HOH HOH . 
O 4 HOH B 65 465 115 HOH HOH . 
O 4 HOH B 66 466 110 HOH HOH . 
O 4 HOH B 67 467 66 HOH HOH . 
O 4 HOH B 68 468 105 HOH HOH . 
O 4 HOH B 69 469 140 HOH HOH . 
O 4 HOH B 70 470 106 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 3 -7.518 -2.3 -0.747 1 47.8 ? C1 EDO 304 A 1 
HETATM 2 O O1 EDO . . . F 3 -7.48 -2.924 0.519 1 46.98 ? O1 EDO 304 A 1 
HETATM 3 C C2 EDO . . . F 3 -7.319 -3.253 -1.858 1 45.15 ? C2 EDO 304 A 1 
HETATM 4 O O2 EDO . . . F 3 -6.938 -4.541 -1.415 1 46.78 ? O2 EDO 304 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           344 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#