data_7QI8
#
_model_server_result.job_id            6vpct1AN3n0eGVxUl5FXYQ 
_model_server_result.datetime_utc      '2024-10-10 14:25:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7qi8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    7QI8 
#
_exptl.entry_id    7QI8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              147.195 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            LYSINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7QI8 
_cell.length_a            84.196 
_cell.length_b            84.196 
_cell.length_c            147.984 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QI8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 73.992 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H15 N2 O2 1' 
_chem_comp.formula_weight    147.195 
_chem_comp.id                LYS 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              LYSINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA LYS sing 237 n n 
N H LYS sing 238 n n 
N H2 LYS sing 239 n n 
CA C LYS sing 240 n n 
CA CB LYS sing 241 n n 
CA HA LYS sing 242 n n 
C O LYS doub 243 n n 
C OXT LYS sing 244 n n 
CB CG LYS sing 245 n n 
CB HB2 LYS sing 246 n n 
CB HB3 LYS sing 247 n n 
CG CD LYS sing 248 n n 
CG HG2 LYS sing 249 n n 
CG HG3 LYS sing 250 n n 
CD CE LYS sing 251 n n 
CD HD2 LYS sing 252 n n 
CD HD3 LYS sing 253 n n 
CE NZ LYS sing 254 n n 
CE HE2 LYS sing 255 n n 
CE HE3 LYS sing 256 n n 
NZ HZ1 LYS sing 257 n n 
NZ HZ2 LYS sing 258 n n 
NZ HZ3 LYS sing 259 n n 
OXT HXT LYS sing 260 n n 
#
_atom_sites.entry_id                     7QI8 
_atom_sites.fract_transf_matrix[1][1]    0.011877 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011877 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006757 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 LYS A 1 601 600 LYS LYS . 
C 3 DD0 A 1 602 701 DD0 209 . 
D 4 HOH A 1 701 26 HOH HOH . 
D 4 HOH A 2 702 58 HOH HOH . 
D 4 HOH A 3 703 66 HOH HOH . 
D 4 HOH A 4 704 31 HOH HOH . 
D 4 HOH A 5 705 44 HOH HOH . 
D 4 HOH A 6 706 30 HOH HOH . 
D 4 HOH A 7 707 10 HOH HOH . 
D 4 HOH A 8 708 73 HOH HOH . 
D 4 HOH A 9 709 45 HOH HOH . 
D 4 HOH A 10 710 25 HOH HOH . 
D 4 HOH A 11 711 7 HOH HOH . 
D 4 HOH A 12 712 78 HOH HOH . 
D 4 HOH A 13 713 3 HOH HOH . 
D 4 HOH A 14 714 70 HOH HOH . 
D 4 HOH A 15 715 60 HOH HOH . 
D 4 HOH A 16 716 36 HOH HOH . 
D 4 HOH A 17 717 71 HOH HOH . 
D 4 HOH A 18 718 38 HOH HOH . 
D 4 HOH A 19 719 2 HOH HOH . 
D 4 HOH A 20 720 81 HOH HOH . 
D 4 HOH A 21 721 15 HOH HOH . 
D 4 HOH A 22 722 49 HOH HOH . 
D 4 HOH A 23 723 23 HOH HOH . 
D 4 HOH A 24 724 57 HOH HOH . 
D 4 HOH A 25 725 28 HOH HOH . 
D 4 HOH A 26 726 59 HOH HOH . 
D 4 HOH A 27 727 20 HOH HOH . 
D 4 HOH A 28 728 17 HOH HOH . 
D 4 HOH A 29 729 4 HOH HOH . 
D 4 HOH A 30 730 80 HOH HOH . 
D 4 HOH A 31 731 56 HOH HOH . 
D 4 HOH A 32 732 68 HOH HOH . 
D 4 HOH A 33 733 24 HOH HOH . 
D 4 HOH A 34 734 65 HOH HOH . 
D 4 HOH A 35 735 18 HOH HOH . 
D 4 HOH A 36 736 51 HOH HOH . 
D 4 HOH A 37 737 14 HOH HOH . 
D 4 HOH A 38 738 77 HOH HOH . 
D 4 HOH A 39 739 54 HOH HOH . 
D 4 HOH A 40 740 48 HOH HOH . 
D 4 HOH A 41 741 12 HOH HOH . 
D 4 HOH A 42 742 63 HOH HOH . 
D 4 HOH A 43 743 61 HOH HOH . 
D 4 HOH A 44 744 47 HOH HOH . 
D 4 HOH A 45 745 76 HOH HOH . 
D 4 HOH A 46 746 27 HOH HOH . 
D 4 HOH A 47 747 69 HOH HOH . 
D 4 HOH A 48 748 43 HOH HOH . 
D 4 HOH A 49 749 42 HOH HOH . 
D 4 HOH A 50 750 52 HOH HOH . 
D 4 HOH A 51 751 72 HOH HOH . 
D 4 HOH A 52 752 55 HOH HOH . 
D 4 HOH A 53 753 32 HOH HOH . 
D 4 HOH A 54 754 62 HOH HOH . 
D 4 HOH A 55 755 8 HOH HOH . 
D 4 HOH A 56 756 5 HOH HOH . 
D 4 HOH A 57 757 75 HOH HOH . 
D 4 HOH A 58 758 19 HOH HOH . 
D 4 HOH A 59 759 40 HOH HOH . 
D 4 HOH A 60 760 29 HOH HOH . 
D 4 HOH A 61 761 9 HOH HOH . 
D 4 HOH A 62 762 64 HOH HOH . 
D 4 HOH A 63 763 53 HOH HOH . 
D 4 HOH A 64 764 34 HOH HOH . 
D 4 HOH A 65 765 33 HOH HOH . 
D 4 HOH A 66 766 39 HOH HOH . 
D 4 HOH A 67 767 41 HOH HOH . 
D 4 HOH A 68 768 74 HOH HOH . 
D 4 HOH A 69 769 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N LYS . . . B 2 5.927 -11.431 21.63 1 55.52 ? N LYS 601 A 1 
HETATM 2 C CA LYS . . . B 2 6.204 -10.34 20.654 1 54.63 ? CA LYS 601 A 1 
HETATM 3 C C LYS . . . B 2 7.683 -9.962 20.733 1 56.75 ? C LYS 601 A 1 
HETATM 4 O O LYS . . . B 2 8.261 -9.447 19.771 1 68.87 ? O LYS 601 A 1 
HETATM 5 C CB LYS . . . B 2 5.318 -9.12 20.934 1 53.42 ? CB LYS 601 A 1 
HETATM 6 C CG LYS . . . B 2 3.835 -9.31 20.618 1 55.13 ? CG LYS 601 A 1 
HETATM 7 C CD LYS . . . B 2 3.506 -9.453 19.127 1 51.42 ? CD LYS 601 A 1 
HETATM 8 C CE LYS . . . B 2 2.019 -9.551 18.816 1 55.37 ? CE LYS 601 A 1 
HETATM 9 N NZ LYS . . . B 2 1.408 -10.849 19.215 1 49.93 ? NZ LYS 601 A 1 
HETATM 10 O OXT LYS . . . B 2 8.314 -10.166 21.768 1 50.85 ? OXT LYS 601 A 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
#