data_7QJK # _model_server_result.job_id NWJKt90jT7eZPIwdrbK00w _model_server_result.datetime_utc '2024-11-23 01:59:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qjk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 7QJK # _exptl.entry_id 7QJK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7QJK _cell.length_a 76.548 _cell.length_b 76.548 _cell.length_c 238.018 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QJK _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,L 1 1 B,H,I,M 2 1 C,J,N 3 1 D,K,O 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 110 n n C1 C2 EDO sing 111 n n C1 H11 EDO sing 112 n n C1 H12 EDO sing 113 n n O1 HO1 EDO sing 114 n n C2 O2 EDO sing 115 n n C2 H21 EDO sing 116 n n C2 H22 EDO sing 117 n n O2 HO2 EDO sing 118 n n # _atom_sites.entry_id 7QJK _atom_sites.fract_transf_matrix[1][1] 0.013064 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013064 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004201 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EDO BBB 1 201 201 EDO EDO . F 3 9VO BBB 1 202 301 9VO 579 . G 4 SO4 BBB 1 203 1 SO4 SO4 . H 3 9VO AAA 1 201 201 9VO 579 . I 3 9VO AAA 1 202 301 9VO 579 . J 3 9VO CCC 1 201 201 9VO 579 . K 3 9VO DDD 1 201 201 9VO 579 . L 5 HOH BBB 1 301 3 HOH HOH . L 5 HOH BBB 2 302 28 HOH HOH . L 5 HOH BBB 3 303 17 HOH HOH . L 5 HOH BBB 4 304 1 HOH HOH . L 5 HOH BBB 5 305 25 HOH HOH . L 5 HOH BBB 6 306 15 HOH HOH . L 5 HOH BBB 7 307 4 HOH HOH . M 5 HOH AAA 1 301 9 HOH HOH . M 5 HOH AAA 2 302 8 HOH HOH . M 5 HOH AAA 3 303 16 HOH HOH . M 5 HOH AAA 4 304 2 HOH HOH . M 5 HOH AAA 5 305 26 HOH HOH . N 5 HOH CCC 1 301 19 HOH HOH . N 5 HOH CCC 2 302 10 HOH HOH . N 5 HOH CCC 3 303 21 HOH HOH . N 5 HOH CCC 4 304 5 HOH HOH . N 5 HOH CCC 5 305 27 HOH HOH . N 5 HOH CCC 6 306 18 HOH HOH . N 5 HOH CCC 7 307 14 HOH HOH . N 5 HOH CCC 8 308 22 HOH HOH . N 5 HOH CCC 9 309 23 HOH HOH . N 5 HOH CCC 10 310 6 HOH HOH . O 5 HOH DDD 1 301 24 HOH HOH . O 5 HOH DDD 2 302 13 HOH HOH . O 5 HOH DDD 3 303 11 HOH HOH . O 5 HOH DDD 4 304 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 2 28.513 -31.176 27.024 1 89.05 ? C1 EDO 201 BBB 1 HETATM 2 O O1 EDO . . . E 2 29.056 -29.907 26.713 1 89.35 ? O1 EDO 201 BBB 1 HETATM 3 C C2 EDO . . . E 2 27.23 -31.095 27.764 1 88.02 ? C2 EDO 201 BBB 1 HETATM 4 O O2 EDO . . . E 2 26.537 -32.326 27.81 1 83.72 ? O2 EDO 201 BBB 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #