data_7QKA
#
_model_server_result.job_id            3x1PAOYqkjLqojSCIRVF8g 
_model_server_result.datetime_utc      '2024-11-07 11:27:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7qka 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    7QKA 
#
_exptl.entry_id    7QKA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.511 
_cell.angle_gamma         90 
_cell.entry_id            7QKA 
_cell.length_a            113.675 
_cell.length_b            53.356 
_cell.length_c            44.994 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QKA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 145 A CYS 145 1_555 E C21 UED . A UED 404 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.754 ? 
covale ? covale2 A SG CYS 145 A CYS 145 1_555 E C21 UED . A UED 404 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.739 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7QKA 
_atom_sites.fract_transf_matrix[1][1]    0.008797 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001952 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018742 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022766 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 401 402 DMS DMS . 
C 2 DMS A 1 402 403 DMS DMS . 
D 2 DMS A 1 403 404 DMS DMS . 
E 3 UED A 1 404 401 UED UED . 
F 4 HOH A 1 501 175 HOH HOH . 
F 4 HOH A 2 502 76 HOH HOH . 
F 4 HOH A 3 503 20 HOH HOH . 
F 4 HOH A 4 504 174 HOH HOH . 
F 4 HOH A 5 505 43 HOH HOH . 
F 4 HOH A 6 506 151 HOH HOH . 
F 4 HOH A 7 507 116 HOH HOH . 
F 4 HOH A 8 508 161 HOH HOH . 
F 4 HOH A 9 509 163 HOH HOH . 
F 4 HOH A 10 510 92 HOH HOH . 
F 4 HOH A 11 511 177 HOH HOH . 
F 4 HOH A 12 512 52 HOH HOH . 
F 4 HOH A 13 513 88 HOH HOH . 
F 4 HOH A 14 514 91 HOH HOH . 
F 4 HOH A 15 515 5 HOH HOH . 
F 4 HOH A 16 516 58 HOH HOH . 
F 4 HOH A 17 517 211 HOH HOH . 
F 4 HOH A 18 518 183 HOH HOH . 
F 4 HOH A 19 519 106 HOH HOH . 
F 4 HOH A 20 520 101 HOH HOH . 
F 4 HOH A 21 521 9 HOH HOH . 
F 4 HOH A 22 522 60 HOH HOH . 
F 4 HOH A 23 523 221 HOH HOH . 
F 4 HOH A 24 524 35 HOH HOH . 
F 4 HOH A 25 525 222 HOH HOH . 
F 4 HOH A 26 526 122 HOH HOH . 
F 4 HOH A 27 527 46 HOH HOH . 
F 4 HOH A 28 528 123 HOH HOH . 
F 4 HOH A 29 529 6 HOH HOH . 
F 4 HOH A 30 530 110 HOH HOH . 
F 4 HOH A 31 531 55 HOH HOH . 
F 4 HOH A 32 532 173 HOH HOH . 
F 4 HOH A 33 533 89 HOH HOH . 
F 4 HOH A 34 534 108 HOH HOH . 
F 4 HOH A 35 535 7 HOH HOH . 
F 4 HOH A 36 536 180 HOH HOH . 
F 4 HOH A 37 537 32 HOH HOH . 
F 4 HOH A 38 538 63 HOH HOH . 
F 4 HOH A 39 539 57 HOH HOH . 
F 4 HOH A 40 540 125 HOH HOH . 
F 4 HOH A 41 541 13 HOH HOH . 
F 4 HOH A 42 542 115 HOH HOH . 
F 4 HOH A 43 543 62 HOH HOH . 
F 4 HOH A 44 544 119 HOH HOH . 
F 4 HOH A 45 545 186 HOH HOH . 
F 4 HOH A 46 546 170 HOH HOH . 
F 4 HOH A 47 547 134 HOH HOH . 
F 4 HOH A 48 548 109 HOH HOH . 
F 4 HOH A 49 549 90 HOH HOH . 
F 4 HOH A 50 550 164 HOH HOH . 
F 4 HOH A 51 551 220 HOH HOH . 
F 4 HOH A 52 552 15 HOH HOH . 
F 4 HOH A 53 553 179 HOH HOH . 
F 4 HOH A 54 554 94 HOH HOH . 
F 4 HOH A 55 555 187 HOH HOH . 
F 4 HOH A 56 556 84 HOH HOH . 
F 4 HOH A 57 557 4 HOH HOH . 
F 4 HOH A 58 558 44 HOH HOH . 
F 4 HOH A 59 559 23 HOH HOH . 
F 4 HOH A 60 560 87 HOH HOH . 
F 4 HOH A 61 561 38 HOH HOH . 
F 4 HOH A 62 562 2 HOH HOH . 
F 4 HOH A 63 563 22 HOH HOH . 
F 4 HOH A 64 564 96 HOH HOH . 
F 4 HOH A 65 565 234 HOH HOH . 
F 4 HOH A 66 566 47 HOH HOH . 
F 4 HOH A 67 567 145 HOH HOH . 
F 4 HOH A 68 568 11 HOH HOH . 
F 4 HOH A 69 569 49 HOH HOH . 
F 4 HOH A 70 570 148 HOH HOH . 
F 4 HOH A 71 571 36 HOH HOH . 
F 4 HOH A 72 572 53 HOH HOH . 
F 4 HOH A 73 573 82 HOH HOH . 
F 4 HOH A 74 574 199 HOH HOH . 
F 4 HOH A 75 575 107 HOH HOH . 
F 4 HOH A 76 576 33 HOH HOH . 
F 4 HOH A 77 577 152 HOH HOH . 
F 4 HOH A 78 578 8 HOH HOH . 
F 4 HOH A 79 579 77 HOH HOH . 
F 4 HOH A 80 580 117 HOH HOH . 
F 4 HOH A 81 581 10 HOH HOH . 
F 4 HOH A 82 582 224 HOH HOH . 
F 4 HOH A 83 583 203 HOH HOH . 
F 4 HOH A 84 584 223 HOH HOH . 
F 4 HOH A 85 585 137 HOH HOH . 
F 4 HOH A 86 586 56 HOH HOH . 
F 4 HOH A 87 587 104 HOH HOH . 
F 4 HOH A 88 588 54 HOH HOH . 
F 4 HOH A 89 589 133 HOH HOH . 
F 4 HOH A 90 590 26 HOH HOH . 
F 4 HOH A 91 591 201 HOH HOH . 
F 4 HOH A 92 592 42 HOH HOH . 
F 4 HOH A 93 593 31 HOH HOH . 
F 4 HOH A 94 594 48 HOH HOH . 
F 4 HOH A 95 595 41 HOH HOH . 
F 4 HOH A 96 596 17 HOH HOH . 
F 4 HOH A 97 597 1 HOH HOH . 
F 4 HOH A 98 598 112 HOH HOH . 
F 4 HOH A 99 599 111 HOH HOH . 
F 4 HOH A 100 600 14 HOH HOH . 
F 4 HOH A 101 601 213 HOH HOH . 
F 4 HOH A 102 602 102 HOH HOH . 
F 4 HOH A 103 603 97 HOH HOH . 
F 4 HOH A 104 604 150 HOH HOH . 
F 4 HOH A 105 605 146 HOH HOH . 
F 4 HOH A 106 606 86 HOH HOH . 
F 4 HOH A 107 607 142 HOH HOH . 
F 4 HOH A 108 608 69 HOH HOH . 
F 4 HOH A 109 609 132 HOH HOH . 
F 4 HOH A 110 610 59 HOH HOH . 
F 4 HOH A 111 611 139 HOH HOH . 
F 4 HOH A 112 612 232 HOH HOH . 
F 4 HOH A 113 613 79 HOH HOH . 
F 4 HOH A 114 614 78 HOH HOH . 
F 4 HOH A 115 615 178 HOH HOH . 
F 4 HOH A 116 616 50 HOH HOH . 
F 4 HOH A 117 617 51 HOH HOH . 
F 4 HOH A 118 618 21 HOH HOH . 
F 4 HOH A 119 619 66 HOH HOH . 
F 4 HOH A 120 620 16 HOH HOH . 
F 4 HOH A 121 621 19 HOH HOH . 
F 4 HOH A 122 622 28 HOH HOH . 
F 4 HOH A 123 623 206 HOH HOH . 
F 4 HOH A 124 624 159 HOH HOH . 
F 4 HOH A 125 625 219 HOH HOH . 
F 4 HOH A 126 626 216 HOH HOH . 
F 4 HOH A 127 627 80 HOH HOH . 
F 4 HOH A 128 628 160 HOH HOH . 
F 4 HOH A 129 629 70 HOH HOH . 
F 4 HOH A 130 630 12 HOH HOH . 
F 4 HOH A 131 631 105 HOH HOH . 
F 4 HOH A 132 632 207 HOH HOH . 
F 4 HOH A 133 633 141 HOH HOH . 
F 4 HOH A 134 634 40 HOH HOH . 
F 4 HOH A 135 635 154 HOH HOH . 
F 4 HOH A 136 636 209 HOH HOH . 
F 4 HOH A 137 637 27 HOH HOH . 
F 4 HOH A 138 638 158 HOH HOH . 
F 4 HOH A 139 639 217 HOH HOH . 
F 4 HOH A 140 640 210 HOH HOH . 
F 4 HOH A 141 641 228 HOH HOH . 
F 4 HOH A 142 642 227 HOH HOH . 
F 4 HOH A 143 643 114 HOH HOH . 
F 4 HOH A 144 644 188 HOH HOH . 
F 4 HOH A 145 645 61 HOH HOH . 
F 4 HOH A 146 646 171 HOH HOH . 
F 4 HOH A 147 647 135 HOH HOH . 
F 4 HOH A 148 648 124 HOH HOH . 
F 4 HOH A 149 649 128 HOH HOH . 
F 4 HOH A 150 650 103 HOH HOH . 
F 4 HOH A 151 651 24 HOH HOH . 
F 4 HOH A 152 652 113 HOH HOH . 
F 4 HOH A 153 653 229 HOH HOH . 
F 4 HOH A 154 654 18 HOH HOH . 
F 4 HOH A 155 655 34 HOH HOH . 
F 4 HOH A 156 656 157 HOH HOH . 
F 4 HOH A 157 657 169 HOH HOH . 
F 4 HOH A 158 658 153 HOH HOH . 
F 4 HOH A 159 659 167 HOH HOH . 
F 4 HOH A 160 660 3 HOH HOH . 
F 4 HOH A 161 661 166 HOH HOH . 
F 4 HOH A 162 662 75 HOH HOH . 
F 4 HOH A 163 663 225 HOH HOH . 
F 4 HOH A 164 664 165 HOH HOH . 
F 4 HOH A 165 665 194 HOH HOH . 
F 4 HOH A 166 666 74 HOH HOH . 
F 4 HOH A 167 667 205 HOH HOH . 
F 4 HOH A 168 668 25 HOH HOH . 
F 4 HOH A 169 669 184 HOH HOH . 
F 4 HOH A 170 670 214 HOH HOH . 
F 4 HOH A 171 671 95 HOH HOH . 
F 4 HOH A 172 672 233 HOH HOH . 
F 4 HOH A 173 673 131 HOH HOH . 
F 4 HOH A 174 674 37 HOH HOH . 
F 4 HOH A 175 675 231 HOH HOH . 
F 4 HOH A 176 676 196 HOH HOH . 
F 4 HOH A 177 677 181 HOH HOH . 
F 4 HOH A 178 678 147 HOH HOH . 
F 4 HOH A 179 679 67 HOH HOH . 
F 4 HOH A 180 680 143 HOH HOH . 
F 4 HOH A 181 681 182 HOH HOH . 
F 4 HOH A 182 682 204 HOH HOH . 
F 4 HOH A 183 683 218 HOH HOH . 
F 4 HOH A 184 684 129 HOH HOH . 
F 4 HOH A 185 685 120 HOH HOH . 
F 4 HOH A 186 686 121 HOH HOH . 
F 4 HOH A 187 687 140 HOH HOH . 
F 4 HOH A 188 688 144 HOH HOH . 
F 4 HOH A 189 689 68 HOH HOH . 
F 4 HOH A 190 690 193 HOH HOH . 
F 4 HOH A 191 691 208 HOH HOH . 
F 4 HOH A 192 692 168 HOH HOH . 
F 4 HOH A 193 693 65 HOH HOH . 
F 4 HOH A 194 694 127 HOH HOH . 
F 4 HOH A 195 695 172 HOH HOH . 
F 4 HOH A 196 696 136 HOH HOH . 
F 4 HOH A 197 697 83 HOH HOH . 
F 4 HOH A 198 698 226 HOH HOH . 
F 4 HOH A 199 699 202 HOH HOH . 
F 4 HOH A 200 700 39 HOH HOH . 
F 4 HOH A 201 701 100 HOH HOH . 
F 4 HOH A 202 702 64 HOH HOH . 
F 4 HOH A 203 703 29 HOH HOH . 
F 4 HOH A 204 704 215 HOH HOH . 
F 4 HOH A 205 705 85 HOH HOH . 
F 4 HOH A 206 706 185 HOH HOH . 
F 4 HOH A 207 707 30 HOH HOH . 
F 4 HOH A 208 708 195 HOH HOH . 
F 4 HOH A 209 709 99 HOH HOH . 
F 4 HOH A 210 710 72 HOH HOH . 
F 4 HOH A 211 711 162 HOH HOH . 
F 4 HOH A 212 712 138 HOH HOH . 
F 4 HOH A 213 713 190 HOH HOH . 
F 4 HOH A 214 714 93 HOH HOH . 
F 4 HOH A 215 715 71 HOH HOH . 
F 4 HOH A 216 716 118 HOH HOH . 
F 4 HOH A 217 717 81 HOH HOH . 
F 4 HOH A 218 718 98 HOH HOH . 
F 4 HOH A 219 719 230 HOH HOH . 
F 4 HOH A 220 720 73 HOH HOH . 
F 4 HOH A 221 721 149 HOH HOH . 
F 4 HOH A 222 722 155 HOH HOH . 
F 4 HOH A 223 723 45 HOH HOH . 
F 4 HOH A 224 724 212 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . B 2 7.057 -50.613 21.541 1 37.21 ? S DMS 401 A 1 
HETATM 2 O O DMS . . . B 2 7.88 -49.726 22.401 1 30.05 ? O DMS 401 A 1 
HETATM 3 C C1 DMS . . . B 2 5.789 -51.415 22.551 1 32.78 ? C1 DMS 401 A 1 
HETATM 4 C C2 DMS . . . B 2 6.037 -49.691 20.357 1 36.36 ? C2 DMS 401 A 1 
HETATM 5 H H11 DMS . . . B 2 5.178 -50.677 23.003 1 39.32 ? H11 DMS 401 A 1 
HETATM 6 H H12 DMS . . . B 2 5.192 -52.041 21.94 1 39.32 ? H12 DMS 401 A 1 
HETATM 7 H H13 DMS . . . B 2 6.253 -51.998 23.304 1 39.32 ? H13 DMS 401 A 1 
HETATM 8 H H21 DMS . . . B 2 5.817 -48.733 20.75 1 43.62 ? H21 DMS 401 A 1 
HETATM 9 H H22 DMS . . . B 2 6.564 -49.585 19.444 1 43.62 ? H22 DMS 401 A 1 
HETATM 10 H H23 DMS . . . B 2 5.134 -50.217 20.183 1 43.62 ? H23 DMS 401 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#