data_7QKN
#
_model_server_result.job_id            WYSIlNdlWA8dtAxSH6xbCg 
_model_server_result.datetime_utc      '2024-10-20 00:38:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7qkn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":601}' 
#
_entry.id    7QKN 
#
_exptl.entry_id    7QKN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              252.376 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[2-(diethylamino)ethyl]-2-sulfanyl-benzamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7QKN 
_cell.length_a            119.749 
_cell.length_b            119.749 
_cell.length_c            78.705 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QKN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,J 1 1 
B,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 68 A CYS 427 1_555 B SG CYS 68 B CYS 427 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
covale ? covale1 A SG CYS 53 A CYS 412 1_555 C S17 JVF . A JVF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
covale ? covale2 B SG CYS 53 B CYS 412 1_555 G S17 JVF . B JVF 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C13 H20 N2 O S' 
_chem_comp.formula_weight    252.376 
_chem_comp.id                JVF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[2-(diethylamino)ethyl]-2-sulfanyl-benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C14 C15 JVF doub 182 n y 
C14 C13 JVF sing 183 n y 
C15 C16 JVF sing 184 n y 
C13 C12 JVF doub 185 n y 
C16 S17 JVF sing 186 n n 
C16 C11 JVF doub 187 n y 
C12 C11 JVF sing 188 n y 
C11 C09 JVF sing 189 n n 
C09 O10 JVF doub 190 n n 
C09 N08 JVF sing 191 n n 
N08 C07 JVF sing 192 n n 
C05 C04 JVF sing 193 n n 
C07 C06 JVF sing 194 n n 
C06 N03 JVF sing 195 n n 
N03 C04 JVF sing 196 n n 
N03 C02 JVF sing 197 n n 
C02 C01 JVF sing 198 n n 
C01 H1 JVF sing 199 n n 
C01 H2 JVF sing 200 n n 
C01 H3 JVF sing 201 n n 
C02 H4 JVF sing 202 n n 
C02 H5 JVF sing 203 n n 
C04 H6 JVF sing 204 n n 
C04 H7 JVF sing 205 n n 
C05 H8 JVF sing 206 n n 
C05 H9 JVF sing 207 n n 
C05 H10 JVF sing 208 n n 
C06 H11 JVF sing 209 n n 
C06 H12 JVF sing 210 n n 
C07 H13 JVF sing 211 n n 
C07 H14 JVF sing 212 n n 
C12 H15 JVF sing 213 n n 
C13 H16 JVF sing 214 n n 
C14 H17 JVF sing 215 n n 
C15 H18 JVF sing 216 n n 
N08 H20 JVF sing 217 n n 
S17 H21 JVF sing 218 n n 
#
_atom_sites.entry_id                     7QKN 
_atom_sites.fract_transf_matrix[1][1]    0.008351 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008351 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012706 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 JVF A 1 601 601 JVF JVF . 
D 3 EDO A 1 602 701 EDO EDO . 
E 3 EDO A 1 603 801 EDO EDO . 
F 4 SCN A 1 604 901 SCN SCN . 
G 2 JVF B 1 601 601 JVF JVF . 
H 3 EDO B 1 602 701 EDO EDO . 
I 4 SCN B 1 603 801 SCN SCN . 
J 5 HOH A 1 701 54 HOH HOH . 
J 5 HOH A 2 702 45 HOH HOH . 
J 5 HOH A 3 703 36 HOH HOH . 
J 5 HOH A 4 704 43 HOH HOH . 
J 5 HOH A 5 705 87 HOH HOH . 
J 5 HOH A 6 706 9 HOH HOH . 
J 5 HOH A 7 707 37 HOH HOH . 
J 5 HOH A 8 708 95 HOH HOH . 
J 5 HOH A 9 709 30 HOH HOH . 
J 5 HOH A 10 710 81 HOH HOH . 
J 5 HOH A 11 711 4 HOH HOH . 
J 5 HOH A 12 712 68 HOH HOH . 
J 5 HOH A 13 713 99 HOH HOH . 
J 5 HOH A 14 714 31 HOH HOH . 
J 5 HOH A 15 715 24 HOH HOH . 
J 5 HOH A 16 716 21 HOH HOH . 
J 5 HOH A 17 717 71 HOH HOH . 
J 5 HOH A 18 718 42 HOH HOH . 
J 5 HOH A 19 719 73 HOH HOH . 
J 5 HOH A 20 720 10 HOH HOH . 
J 5 HOH A 21 721 33 HOH HOH . 
J 5 HOH A 22 722 15 HOH HOH . 
J 5 HOH A 23 723 40 HOH HOH . 
J 5 HOH A 24 724 64 HOH HOH . 
J 5 HOH A 25 725 32 HOH HOH . 
J 5 HOH A 26 726 82 HOH HOH . 
J 5 HOH A 27 727 18 HOH HOH . 
J 5 HOH A 28 728 74 HOH HOH . 
J 5 HOH A 29 729 25 HOH HOH . 
J 5 HOH A 30 730 77 HOH HOH . 
J 5 HOH A 31 731 52 HOH HOH . 
J 5 HOH A 32 732 14 HOH HOH . 
J 5 HOH A 33 733 3 HOH HOH . 
J 5 HOH A 34 734 47 HOH HOH . 
J 5 HOH A 35 735 105 HOH HOH . 
J 5 HOH A 36 736 57 HOH HOH . 
J 5 HOH A 37 737 60 HOH HOH . 
J 5 HOH A 38 738 63 HOH HOH . 
J 5 HOH A 39 739 102 HOH HOH . 
J 5 HOH A 40 740 104 HOH HOH . 
J 5 HOH A 41 741 51 HOH HOH . 
J 5 HOH A 42 742 70 HOH HOH . 
J 5 HOH A 43 743 35 HOH HOH . 
J 5 HOH A 44 744 101 HOH HOH . 
J 5 HOH A 45 745 16 HOH HOH . 
J 5 HOH A 46 746 59 HOH HOH . 
J 5 HOH A 47 747 13 HOH HOH . 
J 5 HOH A 48 748 83 HOH HOH . 
J 5 HOH A 49 749 85 HOH HOH . 
J 5 HOH A 50 750 34 HOH HOH . 
J 5 HOH A 51 751 89 HOH HOH . 
J 5 HOH A 52 752 67 HOH HOH . 
J 5 HOH A 53 753 97 HOH HOH . 
J 5 HOH A 54 754 98 HOH HOH . 
J 5 HOH A 55 755 62 HOH HOH . 
J 5 HOH A 56 756 72 HOH HOH . 
J 5 HOH A 57 757 90 HOH HOH . 
J 5 HOH A 58 758 96 HOH HOH . 
J 5 HOH A 59 759 61 HOH HOH . 
J 5 HOH A 60 760 56 HOH HOH . 
J 5 HOH A 61 761 100 HOH HOH . 
K 5 HOH B 1 701 8 HOH HOH . 
K 5 HOH B 2 702 7 HOH HOH . 
K 5 HOH B 3 703 44 HOH HOH . 
K 5 HOH B 4 704 39 HOH HOH . 
K 5 HOH B 5 705 5 HOH HOH . 
K 5 HOH B 6 706 23 HOH HOH . 
K 5 HOH B 7 707 80 HOH HOH . 
K 5 HOH B 8 708 48 HOH HOH . 
K 5 HOH B 9 709 17 HOH HOH . 
K 5 HOH B 10 710 46 HOH HOH . 
K 5 HOH B 11 711 53 HOH HOH . 
K 5 HOH B 12 712 26 HOH HOH . 
K 5 HOH B 13 713 1 HOH HOH . 
K 5 HOH B 14 714 11 HOH HOH . 
K 5 HOH B 15 715 76 HOH HOH . 
K 5 HOH B 16 716 6 HOH HOH . 
K 5 HOH B 17 717 66 HOH HOH . 
K 5 HOH B 18 718 78 HOH HOH . 
K 5 HOH B 19 719 2 HOH HOH . 
K 5 HOH B 20 720 41 HOH HOH . 
K 5 HOH B 21 721 12 HOH HOH . 
K 5 HOH B 22 722 20 HOH HOH . 
K 5 HOH B 23 723 84 HOH HOH . 
K 5 HOH B 24 724 75 HOH HOH . 
K 5 HOH B 25 725 103 HOH HOH . 
K 5 HOH B 26 726 28 HOH HOH . 
K 5 HOH B 27 727 22 HOH HOH . 
K 5 HOH B 28 728 19 HOH HOH . 
K 5 HOH B 29 729 88 HOH HOH . 
K 5 HOH B 30 730 79 HOH HOH . 
K 5 HOH B 31 731 49 HOH HOH . 
K 5 HOH B 32 732 29 HOH HOH . 
K 5 HOH B 33 733 38 HOH HOH . 
K 5 HOH B 34 734 27 HOH HOH . 
K 5 HOH B 35 735 65 HOH HOH . 
K 5 HOH B 36 736 106 HOH HOH . 
K 5 HOH B 37 737 58 HOH HOH . 
K 5 HOH B 38 738 93 HOH HOH . 
K 5 HOH B 39 739 69 HOH HOH . 
K 5 HOH B 40 740 50 HOH HOH . 
K 5 HOH B 41 741 92 HOH HOH . 
K 5 HOH B 42 742 94 HOH HOH . 
K 5 HOH B 43 743 55 HOH HOH . 
K 5 HOH B 44 744 86 HOH HOH . 
K 5 HOH B 45 745 91 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 JVF . . . G 2 10.705 -44.594 26.41 1 61.04 ? C01 JVF 601 B 1 
HETATM 2 C C02 JVF . . . G 2 11.19 -44.457 24.962 1 73.33 ? C02 JVF 601 B 1 
HETATM 3 C C04 JVF . . . G 2 11.42 -42.769 23.283 1 78.29 ? C04 JVF 601 B 1 
HETATM 4 C C05 JVF . . . G 2 10.063 -42.072 23.168 1 76.77 ? C05 JVF 601 B 1 
HETATM 5 C C06 JVF . . . G 2 13.153 -43.112 24.889 1 74.23 ? C06 JVF 601 B 1 
HETATM 6 C C07 JVF . . . G 2 13.664 -41.688 25.108 1 65.96 ? C07 JVF 601 B 1 
HETATM 7 C C09 JVF . . . G 2 14.09 -41.621 27.616 1 74.71 ? C09 JVF 601 B 1 
HETATM 8 C C11 JVF . . . G 2 13.647 -41.132 29.002 1 75.15 ? C11 JVF 601 B 1 
HETATM 9 C C12 JVF . . . G 2 12.311 -41.263 29.339 1 69.97 ? C12 JVF 601 B 1 
HETATM 10 C C13 JVF . . . G 2 11.841 -40.844 30.574 1 71.6 ? C13 JVF 601 B 1 
HETATM 11 C C14 JVF . . . G 2 12.711 -40.288 31.493 1 71.49 ? C14 JVF 601 B 1 
HETATM 12 C C15 JVF . . . G 2 14.051 -40.16 31.167 1 74.4 ? C15 JVF 601 B 1 
HETATM 13 C C16 JVF . . . G 2 14.529 -40.575 29.93 1 81.82 ? C16 JVF 601 B 1 
HETATM 14 N N03 JVF . . . G 2 11.713 -43.127 24.666 1 75.91 ? N03 JVF 601 B 1 
HETATM 15 N N08 JVF . . . G 2 13.307 -41.249 26.446 1 67.87 ? N08 JVF 601 B 1 
HETATM 16 O O10 JVF . . . G 2 15.044 -42.318 27.506 1 78.7 ? O10 JVF 601 B 1 
HETATM 17 S S17 JVF . . . G 2 16.308 -40.354 29.581 1 84.44 ? S17 JVF 601 B 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           17 
#