data_7QKR # _model_server_result.job_id Q9aOyN1KFg50I7JdJYQFgA _model_server_result.datetime_utc '2024-11-14 18:52:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qkr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1304}' # _entry.id 7QKR # _exptl.entry_id 7QKR _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 544.805 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7QKR _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QKR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 447 A SER 435 1_555 D MG MG . A MG 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc2 C O3G ANP . A ANP 1302 1_555 D MG MG . A MG 1303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? # _chem_comp.formula 'C34 H56 O5' _chem_comp.formula_weight 544.805 _chem_comp.id 9Z9 _chem_comp.mon_nstd_flag . _chem_comp.name (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O25 C26 9Z9 sing 1 n n O25 C24 9Z9 sing 2 n n C50 O49 9Z9 sing 3 n n O49 C48 9Z9 sing 4 n n C24 C23 9Z9 sing 5 n n C48 C23 9Z9 sing 6 n n C23 C22 9Z9 sing 7 n n C22 C21 9Z9 sing 8 n n C21 O20 9Z9 sing 9 n n O20 C17 9Z9 sing 10 n n C17 C18 9Z9 sing 11 n n C17 C16 9Z9 sing 12 n n C18 C19 9Z9 sing 13 n n C16 C13 9Z9 sing 14 n n C19 C11 9Z9 sing 15 n n C13 C11 9Z9 sing 16 n n C13 C14 9Z9 doub 17 n n C11 C12 9Z9 sing 18 n n C11 C08 9Z9 sing 19 n n C14 C15 9Z9 sing 20 n n C08 C09 9Z9 sing 21 n n C08 C07 9Z9 sing 22 n n C15 C07 9Z9 sing 23 n n C09 C10 9Z9 sing 24 n n C07 C06 9Z9 sing 25 n n C10 C02 9Z9 sing 26 n n C06 C02 9Z9 sing 27 n n C06 C05 9Z9 sing 28 n n C02 C01 9Z9 sing 29 n n C02 C03 9Z9 sing 30 n n C05 C04 9Z9 sing 31 n n C03 C04 9Z9 sing 32 n n C03 C74 9Z9 sing 33 n n C04 O72 9Z9 sing 34 n n C74 C75 9Z9 sing 35 n n C74 C73 9Z9 sing 36 n n O72 C73 9Z9 sing 37 n n C73 O80 9Z9 sing 38 n n C73 C76 9Z9 sing 39 n n O80 C79 9Z9 sing 40 n n C76 C77 9Z9 sing 41 n n C79 C78 9Z9 sing 42 n n C77 C78 9Z9 sing 43 n n C78 C81 9Z9 sing 44 n n C01 H1 9Z9 sing 45 n n C01 H2 9Z9 sing 46 n n C01 H3 9Z9 sing 47 n n C03 H4 9Z9 sing 48 n n C04 H5 9Z9 sing 49 n n C05 H6 9Z9 sing 50 n n C05 H7 9Z9 sing 51 n n C06 H8 9Z9 sing 52 n n C07 H9 9Z9 sing 53 n n C08 H10 9Z9 sing 54 n n C09 H11 9Z9 sing 55 n n C09 H12 9Z9 sing 56 n n C10 H13 9Z9 sing 57 n n C10 H14 9Z9 sing 58 n n C12 H15 9Z9 sing 59 n n C12 H16 9Z9 sing 60 n n C12 H17 9Z9 sing 61 n n C14 H18 9Z9 sing 62 n n C15 H19 9Z9 sing 63 n n C15 H20 9Z9 sing 64 n n C16 H21 9Z9 sing 65 n n C16 H22 9Z9 sing 66 n n C17 H23 9Z9 sing 67 n n C18 H24 9Z9 sing 68 n n C18 H25 9Z9 sing 69 n n C19 H26 9Z9 sing 70 n n C19 H27 9Z9 sing 71 n n C21 H28 9Z9 sing 72 n n C21 H29 9Z9 sing 73 n n C22 H30 9Z9 sing 74 n n C22 H31 9Z9 sing 75 n n C23 H32 9Z9 sing 76 n n C24 H33 9Z9 sing 77 n n C24 H34 9Z9 sing 78 n n C26 H35 9Z9 sing 79 n n C26 H36 9Z9 sing 80 n n C26 H37 9Z9 sing 81 n n C48 H38 9Z9 sing 82 n n C48 H39 9Z9 sing 83 n n C50 H40 9Z9 sing 84 n n C50 H41 9Z9 sing 85 n n C50 H42 9Z9 sing 86 n n C74 H43 9Z9 sing 87 n n C75 H44 9Z9 sing 88 n n C75 H45 9Z9 sing 89 n n C75 H46 9Z9 sing 90 n n C76 H47 9Z9 sing 91 n n C76 H48 9Z9 sing 92 n n C77 H49 9Z9 sing 93 n n C77 H50 9Z9 sing 94 n n C78 H51 9Z9 sing 95 n n C79 H52 9Z9 sing 96 n n C79 H53 9Z9 sing 97 n n C81 H54 9Z9 sing 98 n n C81 H55 9Z9 sing 99 n n C81 H56 9Z9 sing 100 n n # _atom_sites.entry_id 7QKR _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 I6H A 1 1301 1301 I6H LIG . C 3 ANP A 1 1302 1301 ANP ANP . D 4 MG A 1 1303 1305 MG MG . E 5 9Z9 A 1 1304 1306 9Z9 9Z9 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 9Z9 . . . E 5 103.139 100.793 117.864 1 41.78 ? C01 9Z9 1304 A 1 HETATM 2 C C02 9Z9 . . . E 5 103.739 99.87 116.801 1 41.78 ? C02 9Z9 1304 A 1 HETATM 3 C C03 9Z9 . . . E 5 102.682 98.874 116.25 1 41.78 ? C03 9Z9 1304 A 1 HETATM 4 C C04 9Z9 . . . E 5 101.985 99.636 115.1 1 41.78 ? C04 9Z9 1304 A 1 HETATM 5 C C05 9Z9 . . . E 5 102.696 100.979 114.939 1 41.78 ? C05 9Z9 1304 A 1 HETATM 6 C C06 9Z9 . . . E 5 104.078 100.644 115.509 1 41.78 ? C06 9Z9 1304 A 1 HETATM 7 C C07 9Z9 . . . E 5 105.127 101.741 115.681 1 41.78 ? C07 9Z9 1304 A 1 HETATM 8 C C08 9Z9 . . . E 5 106.404 101.112 116.266 1 41.78 ? C08 9Z9 1304 A 1 HETATM 9 C C09 9Z9 . . . E 5 106.112 100.288 117.53 1 41.78 ? C09 9Z9 1304 A 1 HETATM 10 C C10 9Z9 . . . E 5 105.024 99.233 117.313 1 41.78 ? C10 9Z9 1304 A 1 HETATM 11 C C11 9Z9 . . . E 5 107.553 102.137 116.473 1 41.78 ? C11 9Z9 1304 A 1 HETATM 12 C C12 9Z9 . . . E 5 107.311 103.038 117.698 1 41.78 ? C12 9Z9 1304 A 1 HETATM 13 C C13 9Z9 . . . E 5 107.684 103.033 115.246 1 41.78 ? C13 9Z9 1304 A 1 HETATM 14 C C14 9Z9 . . . E 5 106.753 103.11 114.308 1 41.78 ? C14 9Z9 1304 A 1 HETATM 15 C C15 9Z9 . . . E 5 105.436 102.4 114.339 1 41.78 ? C15 9Z9 1304 A 1 HETATM 16 C C16 9Z9 . . . E 5 108.948 103.862 115.156 1 41.78 ? C16 9Z9 1304 A 1 HETATM 17 C C17 9Z9 . . . E 5 110.186 102.998 115.297 1 41.78 ? C17 9Z9 1304 A 1 HETATM 18 C C18 9Z9 . . . E 5 110.123 102.231 116.592 1 41.78 ? C18 9Z9 1304 A 1 HETATM 19 C C19 9Z9 . . . E 5 108.873 101.354 116.649 1 41.78 ? C19 9Z9 1304 A 1 HETATM 20 O O20 9Z9 . . . E 5 111.327 103.844 115.359 1 41.78 ? O20 9Z9 1304 A 1 HETATM 21 C C21 9Z9 . . . E 5 111.525 104.662 114.211 1 41.78 ? C21 9Z9 1304 A 1 HETATM 22 C C22 9Z9 . . . E 5 112.798 105.416 114.425 1 41.78 ? C22 9Z9 1304 A 1 HETATM 23 C C23 9Z9 . . . E 5 112.714 106.266 115.689 1 41.78 ? C23 9Z9 1304 A 1 HETATM 24 C C24 9Z9 . . . E 5 114.089 106.781 116.079 1 41.78 ? C24 9Z9 1304 A 1 HETATM 25 O O25 9Z9 . . . E 5 114.938 105.683 116.345 1 41.78 ? O25 9Z9 1304 A 1 HETATM 26 C C26 9Z9 . . . E 5 116.239 106.087 116.726 1 41.78 ? C26 9Z9 1304 A 1 HETATM 27 C C48 9Z9 . . . E 5 111.752 107.424 115.479 1 41.78 ? C48 9Z9 1304 A 1 HETATM 28 O O49 9Z9 . . . E 5 112.27 108.292 114.494 1 41.78 ? O49 9Z9 1304 A 1 HETATM 29 C C50 9Z9 . . . E 5 111.412 109.387 114.236 1 41.78 ? C50 9Z9 1304 A 1 HETATM 30 O O72 9Z9 . . . E 5 100.609 99.761 115.506 1 41.78 ? O72 9Z9 1304 A 1 HETATM 31 C C73 9Z9 . . . E 5 100.313 98.572 116.224 1 41.78 ? C73 9Z9 1304 A 1 HETATM 32 C C74 9Z9 . . . E 5 101.521 98.403 117.137 1 41.78 ? C74 9Z9 1304 A 1 HETATM 33 C C75 9Z9 . . . E 5 101.702 97.035 117.784 1 41.78 ? C75 9Z9 1304 A 1 HETATM 34 C C76 9Z9 . . . E 5 98.985 98.758 116.921 1 41.78 ? C76 9Z9 1304 A 1 HETATM 35 C C77 9Z9 . . . E 5 97.837 98.825 115.932 1 41.78 ? C77 9Z9 1304 A 1 HETATM 36 C C78 9Z9 . . . E 5 97.838 97.583 115.05 1 41.78 ? C78 9Z9 1304 A 1 HETATM 37 C C79 9Z9 . . . E 5 99.204 97.48 114.397 1 41.78 ? C79 9Z9 1304 A 1 HETATM 38 O O80 9Z9 . . . E 5 100.269 97.444 115.352 1 41.78 ? O80 9Z9 1304 A 1 HETATM 39 C C81 9Z9 . . . E 5 96.734 97.617 114.009 1 41.78 ? C81 9Z9 1304 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 442 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 39 #