data_7QL8
#
_model_server_result.job_id            5u9hG9CqvV4griQI9fFykQ 
_model_server_result.datetime_utc      '2024-11-20 00:32:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ql8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    7QL8 
#
_exptl.entry_id    7QL8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              550.691 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7QL8 
_cell.length_a            45.52 
_cell.length_b            64.04 
_cell.length_c            105.38 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QL8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 145 AAA CYS 145 1_555 B C8 I70 . AAA I70 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.849 ? 
metalc ? metalc1 A O LEU 58 AAA LEU 58 1_555 D NA NA . AAA NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc2 A O LYS 61 AAA LYS 61 1_555 D NA NA . AAA NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
#
_chem_comp.formula           'C27 H46 N6 O6' 
_chem_comp.formula_weight    550.691 
_chem_comp.id                I70 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C32 C30 I70 sing 152 n n 
C26 C30 I70 sing 153 n n 
C30 C11 I70 sing 154 n n 
C30 C31 I70 sing 155 n n 
C13 C16 I70 sing 156 n n 
C13 N13 I70 sing 157 n n 
O29 C9 I70 doub 158 n n 
C16 C34 I70 sing 159 n n 
C16 C18 I70 sing 160 n n 
O38 C15 I70 doub 161 n n 
C11 N10 I70 sing 162 n n 
C11 C12 I70 sing 163 n n 
C29 C7 I70 sing 164 n n 
C9 N10 I70 sing 165 n n 
C9 N8 I70 sing 166 n n 
N13 C12 I70 sing 167 n n 
N13 C14 I70 sing 168 n n 
N2 C1 I70 sing 169 n n 
C34 C18 I70 sing 170 n n 
C34 C14 I70 sing 171 n n 
C25 C18 I70 sing 172 n n 
C12 O33 I70 doub 173 n n 
C21 C22 I70 sing 174 n n 
C21 C20 I70 sing 175 n n 
C18 C23 I70 sing 176 n n 
C15 C14 I70 sing 177 n n 
C15 N16 I70 sing 178 n n 
C22 N23 I70 sing 179 n n 
C7 N8 I70 sing 180 n n 
C7 C28 I70 sing 181 n n 
C7 C27 I70 sing 182 n n 
O9 C8 I70 sing 183 n n 
C1 C8 I70 sing 184 n n 
C1 O5 I70 doub 185 n n 
C17 N16 I70 sing 186 n n 
C17 C8 I70 sing 187 n n 
C17 C19 I70 sing 188 n n 
C20 C19 I70 sing 189 n n 
C20 C24 I70 sing 190 n n 
N23 C24 I70 sing 191 n n 
C24 O26 I70 doub 192 n n 
C11 H1 I70 sing 193 n n 
C13 H2 I70 sing 194 n n 
C13 H3 I70 sing 195 n n 
C14 H4 I70 sing 196 n n 
C16 H5 I70 sing 197 n n 
C17 H6 I70 sing 198 n n 
C19 H7 I70 sing 199 n n 
C19 H8 I70 sing 200 n n 
C20 H9 I70 sing 201 n n 
C21 H10 I70 sing 202 n n 
C21 H11 I70 sing 203 n n 
C22 H12 I70 sing 204 n n 
C22 H13 I70 sing 205 n n 
C23 H14 I70 sing 206 n n 
C23 H15 I70 sing 207 n n 
C23 H16 I70 sing 208 n n 
C25 H17 I70 sing 209 n n 
C25 H18 I70 sing 210 n n 
C25 H19 I70 sing 211 n n 
C26 H20 I70 sing 212 n n 
C26 H21 I70 sing 213 n n 
C26 H22 I70 sing 214 n n 
C27 H23 I70 sing 215 n n 
C27 H24 I70 sing 216 n n 
C27 H25 I70 sing 217 n n 
C28 H26 I70 sing 218 n n 
C28 H27 I70 sing 219 n n 
C28 H28 I70 sing 220 n n 
C29 H29 I70 sing 221 n n 
C29 H30 I70 sing 222 n n 
C29 H31 I70 sing 223 n n 
C31 H32 I70 sing 224 n n 
C31 H33 I70 sing 225 n n 
C31 H34 I70 sing 226 n n 
C32 H35 I70 sing 227 n n 
C32 H36 I70 sing 228 n n 
C32 H37 I70 sing 229 n n 
C34 H38 I70 sing 230 n n 
C8 H39 I70 sing 231 n n 
N10 H40 I70 sing 232 n n 
N16 H41 I70 sing 233 n n 
N2 H42 I70 sing 234 n n 
N2 H43 I70 sing 235 n n 
N23 H44 I70 sing 236 n n 
N8 H45 I70 sing 237 n n 
O9 H46 I70 sing 238 n n 
#
_atom_sites.entry_id                     7QL8 
_atom_sites.fract_transf_matrix[1][1]    0.021968 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015615 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009489 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 I70 AAA 1 401 401 I70 LIG . 
C 3 CL AAA 1 402 1 CL CL . 
D 4 NA AAA 1 403 1 NA NA . 
E 4 NA AAA 1 404 2 NA NA . 
F 5 HOH AAA 1 501 204 HOH HOH . 
F 5 HOH AAA 2 502 219 HOH HOH . 
F 5 HOH AAA 3 503 153 HOH HOH . 
F 5 HOH AAA 4 504 123 HOH HOH . 
F 5 HOH AAA 5 505 55 HOH HOH . 
F 5 HOH AAA 6 506 189 HOH HOH . 
F 5 HOH AAA 7 507 188 HOH HOH . 
F 5 HOH AAA 8 508 64 HOH HOH . 
F 5 HOH AAA 9 509 183 HOH HOH . 
F 5 HOH AAA 10 510 200 HOH HOH . 
F 5 HOH AAA 11 511 50 HOH HOH . 
F 5 HOH AAA 12 512 196 HOH HOH . 
F 5 HOH AAA 13 513 116 HOH HOH . 
F 5 HOH AAA 14 514 194 HOH HOH . 
F 5 HOH AAA 15 515 122 HOH HOH . 
F 5 HOH AAA 16 516 40 HOH HOH . 
F 5 HOH AAA 17 517 73 HOH HOH . 
F 5 HOH AAA 18 518 78 HOH HOH . 
F 5 HOH AAA 19 519 95 HOH HOH . 
F 5 HOH AAA 20 520 125 HOH HOH . 
F 5 HOH AAA 21 521 137 HOH HOH . 
F 5 HOH AAA 22 522 129 HOH HOH . 
F 5 HOH AAA 23 523 53 HOH HOH . 
F 5 HOH AAA 24 524 9 HOH HOH . 
F 5 HOH AAA 25 525 56 HOH HOH . 
F 5 HOH AAA 26 526 46 HOH HOH . 
F 5 HOH AAA 27 527 41 HOH HOH . 
F 5 HOH AAA 28 528 35 HOH HOH . 
F 5 HOH AAA 29 529 140 HOH HOH . 
F 5 HOH AAA 30 530 76 HOH HOH . 
F 5 HOH AAA 31 531 161 HOH HOH . 
F 5 HOH AAA 32 532 210 HOH HOH . 
F 5 HOH AAA 33 533 209 HOH HOH . 
F 5 HOH AAA 34 534 67 HOH HOH . 
F 5 HOH AAA 35 535 143 HOH HOH . 
F 5 HOH AAA 36 536 213 HOH HOH . 
F 5 HOH AAA 37 537 91 HOH HOH . 
F 5 HOH AAA 38 538 191 HOH HOH . 
F 5 HOH AAA 39 539 22 HOH HOH . 
F 5 HOH AAA 40 540 127 HOH HOH . 
F 5 HOH AAA 41 541 81 HOH HOH . 
F 5 HOH AAA 42 542 94 HOH HOH . 
F 5 HOH AAA 43 543 206 HOH HOH . 
F 5 HOH AAA 44 544 115 HOH HOH . 
F 5 HOH AAA 45 545 21 HOH HOH . 
F 5 HOH AAA 46 546 211 HOH HOH . 
F 5 HOH AAA 47 547 208 HOH HOH . 
F 5 HOH AAA 48 548 218 HOH HOH . 
F 5 HOH AAA 49 549 199 HOH HOH . 
F 5 HOH AAA 50 550 128 HOH HOH . 
F 5 HOH AAA 51 551 71 HOH HOH . 
F 5 HOH AAA 52 552 47 HOH HOH . 
F 5 HOH AAA 53 553 134 HOH HOH . 
F 5 HOH AAA 54 554 14 HOH HOH . 
F 5 HOH AAA 55 555 214 HOH HOH . 
F 5 HOH AAA 56 556 207 HOH HOH . 
F 5 HOH AAA 57 557 205 HOH HOH . 
F 5 HOH AAA 58 558 182 HOH HOH . 
F 5 HOH AAA 59 559 104 HOH HOH . 
F 5 HOH AAA 60 560 212 HOH HOH . 
F 5 HOH AAA 61 561 111 HOH HOH . 
F 5 HOH AAA 62 562 110 HOH HOH . 
F 5 HOH AAA 63 563 193 HOH HOH . 
F 5 HOH AAA 64 564 28 HOH HOH . 
F 5 HOH AAA 65 565 61 HOH HOH . 
F 5 HOH AAA 66 566 174 HOH HOH . 
F 5 HOH AAA 67 567 86 HOH HOH . 
F 5 HOH AAA 68 568 5 HOH HOH . 
F 5 HOH AAA 69 569 101 HOH HOH . 
F 5 HOH AAA 70 570 216 HOH HOH . 
F 5 HOH AAA 71 571 215 HOH HOH . 
F 5 HOH AAA 72 572 217 HOH HOH . 
F 5 HOH AAA 73 573 203 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 I70 . . . B 2 18.211 -11.27 -22.199 1 56.97 0 C1 I70 401 AAA 1 
HETATM 2 C C11 I70 . . . B 2 20.013 -15.018 -29.735 1 45.39 0 C11 I70 401 AAA 1 
HETATM 3 C C12 I70 . . . B 2 19.188 -15.008 -28.449 1 42.79 0 C12 I70 401 AAA 1 
HETATM 4 C C13 I70 . . . B 2 20.844 -16.581 -27.304 1 44.27 0 C13 I70 401 AAA 1 
HETATM 5 C C14 I70 . . . B 2 18.921 -15.548 -26.172 1 45.49 0 C14 I70 401 AAA 1 
HETATM 6 C C15 I70 . . . B 2 19.107 -14.119 -25.7 1 48.71 0 C15 I70 401 AAA 1 
HETATM 7 C C16 I70 . . . B 2 20.772 -17.12 -25.883 1 45.16 0 C16 I70 401 AAA 1 
HETATM 8 C C17 I70 . . . B 2 17.997 -12.269 -24.525 1 56.47 0 C17 I70 401 AAA 1 
HETATM 9 C C18 I70 . . . B 2 19.58 -17.963 -25.51 1 46.04 0 C18 I70 401 AAA 1 
HETATM 10 C C19 I70 . . . B 2 16.841 -11.482 -25.15 1 52.79 0 C19 I70 401 AAA 1 
HETATM 11 C C20 I70 . . . B 2 17.215 -10.456 -26.232 1 54.89 0 C20 I70 401 AAA 1 
HETATM 12 C C21 I70 . . . B 2 18.585 -10.474 -26.892 1 51.43 0 C21 I70 401 AAA 1 
HETATM 13 C C22 I70 . . . B 2 18.398 -9.524 -28.078 1 51.85 0 C22 I70 401 AAA 1 
HETATM 14 C C23 I70 . . . B 2 18.783 -18.554 -26.659 1 41.01 0 C23 I70 401 AAA 1 
HETATM 15 C C24 I70 . . . B 2 16.316 -10.37 -27.46 1 56.87 0 C24 I70 401 AAA 1 
HETATM 16 C C25 I70 . . . B 2 19.612 -18.834 -24.27 1 44.61 0 C25 I70 401 AAA 1 
HETATM 17 C C26 I70 . . . B 2 21.621 -13.84 -31.282 1 42.24 0 C26 I70 401 AAA 1 
HETATM 18 C C27 I70 . . . B 2 17.504 -18.325 -34.222 1 58.84 0 C27 I70 401 AAA 1 
HETATM 19 C C28 I70 . . . B 2 19.966 -18.433 -33.931 1 52.83 0 C28 I70 401 AAA 1 
HETATM 20 C C29 I70 . . . B 2 18.433 -19.396 -32.18 1 59.8 0 C29 I70 401 AAA 1 
HETATM 21 C C30 I70 . . . B 2 20.694 -13.678 -30.077 1 46.28 0 C30 I70 401 AAA 1 
HETATM 22 C C31 I70 . . . B 2 19.65 -12.609 -30.402 1 45.03 0 C31 I70 401 AAA 1 
HETATM 23 C C32 I70 . . . B 2 21.544 -13.192 -28.898 1 50.91 0 C32 I70 401 AAA 1 
HETATM 24 C C34 I70 . . . B 2 19.573 -16.494 -25.196 1 45.83 0 C34 I70 401 AAA 1 
HETATM 25 C C7 I70 . . . B 2 18.634 -18.286 -33.201 1 55.12 0 C7 I70 401 AAA 1 
HETATM 26 C C8 I70 . . . B 2 18.032 -12.547 -22.999 1 59.94 0 C8 I70 401 AAA 1 
HETATM 27 C C9 I70 . . . B 2 19.448 -16.686 -31.42 1 47.16 0 C9 I70 401 AAA 1 
HETATM 28 N N10 I70 . . . B 2 19.156 -15.527 -30.795 1 44.1 0 N10 I70 401 AAA 1 
HETATM 29 N N13 I70 . . . B 2 19.656 -15.718 -27.416 1 42.64 0 N13 I70 401 AAA 1 
HETATM 30 N N16 I70 . . . B 2 18.015 -13.586 -25.163 1 50.38 0 N16 I70 401 AAA 1 
HETATM 31 N N2 I70 . . . B 2 18.864 -11.294 -20.885 1 61.72 0 N2 I70 401 AAA 1 
HETATM 32 N N23 I70 . . . B 2 16.983 -9.68 -28.387 1 51.71 0 N23 I70 401 AAA 1 
HETATM 33 N N8 I70 . . . B 2 18.615 -17.022 -32.432 1 47.95 0 N8 I70 401 AAA 1 
HETATM 34 O O26 I70 . . . B 2 15.148 -10.806 -27.577 1 53.95 0 O26 I70 401 AAA 1 
HETATM 35 O O29 I70 . . . B 2 20.458 -17.351 -31.079 1 46.99 0 O29 I70 401 AAA 1 
HETATM 36 O O33 I70 . . . B 2 18.123 -14.407 -28.363 1 36.84 0 O33 I70 401 AAA 1 
HETATM 37 O O38 I70 . . . B 2 20.187 -13.535 -25.818 1 46.17 0 O38 I70 401 AAA 1 
HETATM 38 O O5 I70 . . . B 2 17.815 -10.235 -22.641 1 50.91 0 O5 I70 401 AAA 1 
HETATM 39 O O9 I70 . . . B 2 16.878 -13.255 -22.592 1 84.68 0 O9 I70 401 AAA 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           39 
#