data_7QMH
#
_model_server_result.job_id            eqY2ijlwrHvVJFda3KE_cA 
_model_server_result.datetime_utc      '2024-11-26 14:21:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7qmh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":2605}' 
#
_entry.id    7QMH 
#
_exptl.entry_id    7QMH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.571 
_cell.angle_gamma         90 
_cell.entry_id            7QMH 
_cell.length_a            45.854 
_cell.length_b            73.986 
_cell.length_c            53.418 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QMH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             344 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              255 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             379 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              290 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.04 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     7QMH 
_atom_sites.fract_transf_matrix[1][1]    0.021808 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007753 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013516 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019868 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 U1H A 1 2601 2601 U1H LIG . 
C 3 PG5 A 1 2602 2801 PG5 PG5 . 
D 4 DMS A 1 2603 2901 DMS DMS . 
E 4 DMS A 1 2604 3001 DMS DMS . 
F 4 DMS A 1 2605 3101 DMS DMS . 
G 2 U1H A 1 2606 3401 U1H LIG . 
H 5 HOH A 1 2701 143 HOH HOH . 
H 5 HOH A 2 2702 72 HOH HOH . 
H 5 HOH A 3 2703 161 HOH HOH . 
H 5 HOH A 4 2704 135 HOH HOH . 
H 5 HOH A 5 2705 77 HOH HOH . 
H 5 HOH A 6 2706 177 HOH HOH . 
H 5 HOH A 7 2707 83 HOH HOH . 
H 5 HOH A 8 2708 121 HOH HOH . 
H 5 HOH A 9 2709 108 HOH HOH . 
H 5 HOH A 10 2710 54 HOH HOH . 
H 5 HOH A 11 2711 69 HOH HOH . 
H 5 HOH A 12 2712 52 HOH HOH . 
H 5 HOH A 13 2713 81 HOH HOH . 
H 5 HOH A 14 2714 67 HOH HOH . 
H 5 HOH A 15 2715 23 HOH HOH . 
H 5 HOH A 16 2716 64 HOH HOH . 
H 5 HOH A 17 2717 5 HOH HOH . 
H 5 HOH A 18 2718 119 HOH HOH . 
H 5 HOH A 19 2719 21 HOH HOH . 
H 5 HOH A 20 2720 193 HOH HOH . 
H 5 HOH A 21 2721 48 HOH HOH . 
H 5 HOH A 22 2722 25 HOH HOH . 
H 5 HOH A 23 2723 141 HOH HOH . 
H 5 HOH A 24 2724 28 HOH HOH . 
H 5 HOH A 25 2725 139 HOH HOH . 
H 5 HOH A 26 2726 130 HOH HOH . 
H 5 HOH A 27 2727 26 HOH HOH . 
H 5 HOH A 28 2728 117 HOH HOH . 
H 5 HOH A 29 2729 27 HOH HOH . 
H 5 HOH A 30 2730 1 HOH HOH . 
H 5 HOH A 31 2731 62 HOH HOH . 
H 5 HOH A 32 2732 124 HOH HOH . 
H 5 HOH A 33 2733 16 HOH HOH . 
H 5 HOH A 34 2734 132 HOH HOH . 
H 5 HOH A 35 2735 33 HOH HOH . 
H 5 HOH A 36 2736 85 HOH HOH . 
H 5 HOH A 37 2737 99 HOH HOH . 
H 5 HOH A 38 2738 30 HOH HOH . 
H 5 HOH A 39 2739 18 HOH HOH . 
H 5 HOH A 40 2740 22 HOH HOH . 
H 5 HOH A 41 2741 76 HOH HOH . 
H 5 HOH A 42 2742 86 HOH HOH . 
H 5 HOH A 43 2743 7 HOH HOH . 
H 5 HOH A 44 2744 190 HOH HOH . 
H 5 HOH A 45 2745 70 HOH HOH . 
H 5 HOH A 46 2746 90 HOH HOH . 
H 5 HOH A 47 2747 171 HOH HOH . 
H 5 HOH A 48 2748 17 HOH HOH . 
H 5 HOH A 49 2749 2 HOH HOH . 
H 5 HOH A 50 2750 39 HOH HOH . 
H 5 HOH A 51 2751 11 HOH HOH . 
H 5 HOH A 52 2752 118 HOH HOH . 
H 5 HOH A 53 2753 71 HOH HOH . 
H 5 HOH A 54 2754 55 HOH HOH . 
H 5 HOH A 55 2755 51 HOH HOH . 
H 5 HOH A 56 2756 32 HOH HOH . 
H 5 HOH A 57 2757 6 HOH HOH . 
H 5 HOH A 58 2758 29 HOH HOH . 
H 5 HOH A 59 2759 176 HOH HOH . 
H 5 HOH A 60 2760 40 HOH HOH . 
H 5 HOH A 61 2761 189 HOH HOH . 
H 5 HOH A 62 2762 8 HOH HOH . 
H 5 HOH A 63 2763 61 HOH HOH . 
H 5 HOH A 64 2764 12 HOH HOH . 
H 5 HOH A 65 2765 42 HOH HOH . 
H 5 HOH A 66 2766 13 HOH HOH . 
H 5 HOH A 67 2767 60 HOH HOH . 
H 5 HOH A 68 2768 84 HOH HOH . 
H 5 HOH A 69 2769 59 HOH HOH . 
H 5 HOH A 70 2770 19 HOH HOH . 
H 5 HOH A 71 2771 110 HOH HOH . 
H 5 HOH A 72 2772 46 HOH HOH . 
H 5 HOH A 73 2773 79 HOH HOH . 
H 5 HOH A 74 2774 113 HOH HOH . 
H 5 HOH A 75 2775 34 HOH HOH . 
H 5 HOH A 76 2776 49 HOH HOH . 
H 5 HOH A 77 2777 47 HOH HOH . 
H 5 HOH A 78 2778 31 HOH HOH . 
H 5 HOH A 79 2779 3 HOH HOH . 
H 5 HOH A 80 2780 96 HOH HOH . 
H 5 HOH A 81 2781 15 HOH HOH . 
H 5 HOH A 82 2782 111 HOH HOH . 
H 5 HOH A 83 2783 149 HOH HOH . 
H 5 HOH A 84 2784 10 HOH HOH . 
H 5 HOH A 85 2785 4 HOH HOH . 
H 5 HOH A 86 2786 43 HOH HOH . 
H 5 HOH A 87 2787 151 HOH HOH . 
H 5 HOH A 88 2788 50 HOH HOH . 
H 5 HOH A 89 2789 75 HOH HOH . 
H 5 HOH A 90 2790 9 HOH HOH . 
H 5 HOH A 91 2791 44 HOH HOH . 
H 5 HOH A 92 2792 56 HOH HOH . 
H 5 HOH A 93 2793 91 HOH HOH . 
H 5 HOH A 94 2794 109 HOH HOH . 
H 5 HOH A 95 2795 57 HOH HOH . 
H 5 HOH A 96 2796 97 HOH HOH . 
H 5 HOH A 97 2797 182 HOH HOH . 
H 5 HOH A 98 2798 137 HOH HOH . 
H 5 HOH A 99 2799 154 HOH HOH . 
H 5 HOH A 100 2800 120 HOH HOH . 
H 5 HOH A 101 2801 129 HOH HOH . 
H 5 HOH A 102 2802 24 HOH HOH . 
H 5 HOH A 103 2803 68 HOH HOH . 
H 5 HOH A 104 2804 89 HOH HOH . 
H 5 HOH A 105 2805 66 HOH HOH . 
H 5 HOH A 106 2806 112 HOH HOH . 
H 5 HOH A 107 2807 82 HOH HOH . 
H 5 HOH A 108 2808 188 HOH HOH . 
H 5 HOH A 109 2809 14 HOH HOH . 
H 5 HOH A 110 2810 20 HOH HOH . 
H 5 HOH A 111 2811 41 HOH HOH . 
H 5 HOH A 112 2812 114 HOH HOH . 
H 5 HOH A 113 2813 98 HOH HOH . 
H 5 HOH A 114 2814 36 HOH HOH . 
H 5 HOH A 115 2815 88 HOH HOH . 
H 5 HOH A 116 2816 138 HOH HOH . 
H 5 HOH A 117 2817 125 HOH HOH . 
H 5 HOH A 118 2818 53 HOH HOH . 
H 5 HOH A 119 2819 133 HOH HOH . 
H 5 HOH A 120 2820 106 HOH HOH . 
H 5 HOH A 121 2821 142 HOH HOH . 
H 5 HOH A 122 2822 94 HOH HOH . 
H 5 HOH A 123 2823 38 HOH HOH . 
H 5 HOH A 124 2824 122 HOH HOH . 
H 5 HOH A 125 2825 169 HOH HOH . 
H 5 HOH A 126 2826 45 HOH HOH . 
H 5 HOH A 127 2827 146 HOH HOH . 
H 5 HOH A 128 2828 115 HOH HOH . 
H 5 HOH A 129 2829 92 HOH HOH . 
H 5 HOH A 130 2830 95 HOH HOH . 
H 5 HOH A 131 2831 116 HOH HOH . 
H 5 HOH A 132 2832 35 HOH HOH . 
H 5 HOH A 133 2833 103 HOH HOH . 
H 5 HOH A 134 2834 102 HOH HOH . 
H 5 HOH A 135 2835 105 HOH HOH . 
H 5 HOH A 136 2836 131 HOH HOH . 
H 5 HOH A 137 2837 37 HOH HOH . 
H 5 HOH A 138 2838 107 HOH HOH . 
H 5 HOH A 139 2839 196 HOH HOH . 
H 5 HOH A 140 2840 163 HOH HOH . 
H 5 HOH A 141 2841 185 HOH HOH . 
H 5 HOH A 142 2842 144 HOH HOH . 
H 5 HOH A 143 2843 160 HOH HOH . 
H 5 HOH A 144 2844 199 HOH HOH . 
H 5 HOH A 145 2845 63 HOH HOH . 
H 5 HOH A 146 2846 197 HOH HOH . 
H 5 HOH A 147 2847 58 HOH HOH . 
H 5 HOH A 148 2848 65 HOH HOH . 
H 5 HOH A 149 2849 155 HOH HOH . 
H 5 HOH A 150 2850 134 HOH HOH . 
H 5 HOH A 151 2851 123 HOH HOH . 
H 5 HOH A 152 2852 152 HOH HOH . 
H 5 HOH A 153 2853 147 HOH HOH . 
H 5 HOH A 154 2854 87 HOH HOH . 
H 5 HOH A 155 2855 174 HOH HOH . 
H 5 HOH A 156 2856 192 HOH HOH . 
H 5 HOH A 157 2857 181 HOH HOH . 
H 5 HOH A 158 2858 166 HOH HOH . 
H 5 HOH A 159 2859 104 HOH HOH . 
H 5 HOH A 160 2860 168 HOH HOH . 
H 5 HOH A 161 2861 173 HOH HOH . 
H 5 HOH A 162 2862 153 HOH HOH . 
H 5 HOH A 163 2863 78 HOH HOH . 
H 5 HOH A 164 2864 159 HOH HOH . 
H 5 HOH A 165 2865 126 HOH HOH . 
H 5 HOH A 166 2866 145 HOH HOH . 
H 5 HOH A 167 2867 198 HOH HOH . 
H 5 HOH A 168 2868 195 HOH HOH . 
H 5 HOH A 169 2869 127 HOH HOH . 
H 5 HOH A 170 2870 140 HOH HOH . 
H 5 HOH A 171 2871 101 HOH HOH . 
H 5 HOH A 172 2872 128 HOH HOH . 
H 5 HOH A 173 2873 167 HOH HOH . 
H 5 HOH A 174 2874 175 HOH HOH . 
H 5 HOH A 175 2875 93 HOH HOH . 
H 5 HOH A 176 2876 148 HOH HOH . 
H 5 HOH A 177 2877 180 HOH HOH . 
H 5 HOH A 178 2878 74 HOH HOH . 
H 5 HOH A 179 2879 73 HOH HOH . 
H 5 HOH A 180 2880 191 HOH HOH . 
H 5 HOH A 181 2881 80 HOH HOH . 
H 5 HOH A 182 2882 179 HOH HOH . 
H 5 HOH A 183 2883 170 HOH HOH . 
H 5 HOH A 184 2884 183 HOH HOH . 
H 5 HOH A 185 2885 172 HOH HOH . 
H 5 HOH A 186 2886 157 HOH HOH . 
H 5 HOH A 187 2887 156 HOH HOH . 
H 5 HOH A 188 2888 162 HOH HOH . 
H 5 HOH A 189 2889 165 HOH HOH . 
H 5 HOH A 190 2890 100 HOH HOH . 
H 5 HOH A 191 2891 194 HOH HOH . 
H 5 HOH A 192 2892 178 HOH HOH . 
H 5 HOH A 193 2893 184 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . F 4 3.206 8.897 14.398 0.62 55 ? S DMS 2605 A 1 
HETATM 2 O O DMS . . . F 4 4.535 8.316 14.19 0.62 42.93 ? O DMS 2605 A 1 
HETATM 3 C C1 DMS . . . F 4 3.144 10.377 13.349 0.62 47.58 ? C1 DMS 2605 A 1 
HETATM 4 C C2 DMS . . . F 4 2.071 7.878 13.42 0.62 47.77 ? C2 DMS 2605 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           4 
#