data_7QNH # _model_server_result.job_id BO4uJKMuFHNWx59qi5m8XA _model_server_result.datetime_utc '2024-11-25 00:22:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qnh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":403}' # _entry.id 7QNH # _exptl.entry_id 7QNH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.405 _cell.angle_gamma 90 _cell.entry_id 7QNH _cell.length_a 69.539 _cell.length_b 54.647 _cell.length_c 106.562 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QNH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 200 AAA HIS 200 1_555 D FE FE . AAA FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc2 A NE2 HIS 263 AAA HIS 263 1_555 D FE FE . AAA FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc3 B OD1 ASP 196 BBB ASP 196 1_555 F FE FE . BBB FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.772 ? metalc ? metalc4 B NE2 HIS 200 BBB HIS 200 1_555 F FE FE . BBB FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc5 B NE2 HIS 263 BBB HIS 263 1_555 F FE FE . BBB FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc6 B NE2 HIS 277 BBB HIS 277 1_555 F FE FE . BBB FE 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.794 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7QNH _atom_sites.fract_transf_matrix[1][1] 0.01438 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003427 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018299 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009647 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAI AAA 1 401 401 NAI NAI . D 3 FE AAA 1 402 402 FE FE . E 2 NAI BBB 1 401 401 NAI NAI . F 3 FE BBB 1 402 402 FE FE . G 4 GOL BBB 1 403 403 GOL GOL . H 5 HOH AAA 1 501 60 HOH HOH . H 5 HOH AAA 2 502 111 HOH HOH . H 5 HOH AAA 3 503 27 HOH HOH . H 5 HOH AAA 4 504 108 HOH HOH . H 5 HOH AAA 5 505 118 HOH HOH . H 5 HOH AAA 6 506 172 HOH HOH . H 5 HOH AAA 7 507 45 HOH HOH . H 5 HOH AAA 8 508 128 HOH HOH . H 5 HOH AAA 9 509 178 HOH HOH . H 5 HOH AAA 10 510 170 HOH HOH . H 5 HOH AAA 11 511 91 HOH HOH . H 5 HOH AAA 12 512 136 HOH HOH . H 5 HOH AAA 13 513 115 HOH HOH . H 5 HOH AAA 14 514 179 HOH HOH . H 5 HOH AAA 15 515 28 HOH HOH . H 5 HOH AAA 16 516 187 HOH HOH . H 5 HOH AAA 17 517 184 HOH HOH . H 5 HOH AAA 18 518 154 HOH HOH . H 5 HOH AAA 19 519 2 HOH HOH . H 5 HOH AAA 20 520 39 HOH HOH . H 5 HOH AAA 21 521 76 HOH HOH . H 5 HOH AAA 22 522 151 HOH HOH . H 5 HOH AAA 23 523 82 HOH HOH . H 5 HOH AAA 24 524 84 HOH HOH . H 5 HOH AAA 25 525 169 HOH HOH . H 5 HOH AAA 26 526 51 HOH HOH . H 5 HOH AAA 27 527 12 HOH HOH . H 5 HOH AAA 28 528 113 HOH HOH . H 5 HOH AAA 29 529 183 HOH HOH . H 5 HOH AAA 30 530 156 HOH HOH . H 5 HOH AAA 31 531 180 HOH HOH . H 5 HOH AAA 32 532 77 HOH HOH . H 5 HOH AAA 33 533 9 HOH HOH . H 5 HOH AAA 34 534 30 HOH HOH . H 5 HOH AAA 35 535 1 HOH HOH . H 5 HOH AAA 36 536 138 HOH HOH . H 5 HOH AAA 37 537 29 HOH HOH . H 5 HOH AAA 38 538 3 HOH HOH . H 5 HOH AAA 39 539 173 HOH HOH . H 5 HOH AAA 40 540 94 HOH HOH . H 5 HOH AAA 41 541 75 HOH HOH . H 5 HOH AAA 42 542 71 HOH HOH . H 5 HOH AAA 43 543 18 HOH HOH . H 5 HOH AAA 44 544 44 HOH HOH . H 5 HOH AAA 45 545 56 HOH HOH . H 5 HOH AAA 46 546 6 HOH HOH . H 5 HOH AAA 47 547 143 HOH HOH . H 5 HOH AAA 48 548 114 HOH HOH . H 5 HOH AAA 49 549 7 HOH HOH . H 5 HOH AAA 50 550 176 HOH HOH . H 5 HOH AAA 51 551 73 HOH HOH . H 5 HOH AAA 52 552 144 HOH HOH . H 5 HOH AAA 53 553 34 HOH HOH . H 5 HOH AAA 54 554 74 HOH HOH . H 5 HOH AAA 55 555 63 HOH HOH . H 5 HOH AAA 56 556 22 HOH HOH . H 5 HOH AAA 57 557 177 HOH HOH . H 5 HOH AAA 58 558 137 HOH HOH . H 5 HOH AAA 59 559 195 HOH HOH . H 5 HOH AAA 60 560 134 HOH HOH . H 5 HOH AAA 61 561 102 HOH HOH . H 5 HOH AAA 62 562 87 HOH HOH . H 5 HOH AAA 63 563 162 HOH HOH . H 5 HOH AAA 64 564 53 HOH HOH . H 5 HOH AAA 65 565 23 HOH HOH . H 5 HOH AAA 66 566 70 HOH HOH . H 5 HOH AAA 67 567 121 HOH HOH . H 5 HOH AAA 68 568 116 HOH HOH . H 5 HOH AAA 69 569 166 HOH HOH . H 5 HOH AAA 70 570 122 HOH HOH . H 5 HOH AAA 71 571 181 HOH HOH . H 5 HOH AAA 72 572 155 HOH HOH . H 5 HOH AAA 73 573 68 HOH HOH . H 5 HOH AAA 74 574 67 HOH HOH . H 5 HOH AAA 75 575 54 HOH HOH . H 5 HOH AAA 76 576 164 HOH HOH . H 5 HOH AAA 77 577 123 HOH HOH . H 5 HOH AAA 78 578 78 HOH HOH . H 5 HOH AAA 79 579 96 HOH HOH . H 5 HOH AAA 80 580 153 HOH HOH . H 5 HOH AAA 81 581 182 HOH HOH . H 5 HOH AAA 82 582 158 HOH HOH . H 5 HOH AAA 83 583 119 HOH HOH . H 5 HOH AAA 84 584 163 HOH HOH . I 5 HOH BBB 1 501 57 HOH HOH . I 5 HOH BBB 2 502 185 HOH HOH . I 5 HOH BBB 3 503 147 HOH HOH . I 5 HOH BBB 4 504 65 HOH HOH . I 5 HOH BBB 5 505 32 HOH HOH . I 5 HOH BBB 6 506 35 HOH HOH . I 5 HOH BBB 7 507 92 HOH HOH . I 5 HOH BBB 8 508 38 HOH HOH . I 5 HOH BBB 9 509 26 HOH HOH . I 5 HOH BBB 10 510 8 HOH HOH . I 5 HOH BBB 11 511 101 HOH HOH . I 5 HOH BBB 12 512 64 HOH HOH . I 5 HOH BBB 13 513 80 HOH HOH . I 5 HOH BBB 14 514 89 HOH HOH . I 5 HOH BBB 15 515 141 HOH HOH . I 5 HOH BBB 16 516 133 HOH HOH . I 5 HOH BBB 17 517 49 HOH HOH . I 5 HOH BBB 18 518 17 HOH HOH . I 5 HOH BBB 19 519 149 HOH HOH . I 5 HOH BBB 20 520 21 HOH HOH . I 5 HOH BBB 21 521 100 HOH HOH . I 5 HOH BBB 22 522 61 HOH HOH . I 5 HOH BBB 23 523 46 HOH HOH . I 5 HOH BBB 24 524 47 HOH HOH . I 5 HOH BBB 25 525 58 HOH HOH . I 5 HOH BBB 26 526 148 HOH HOH . I 5 HOH BBB 27 527 20 HOH HOH . I 5 HOH BBB 28 528 40 HOH HOH . I 5 HOH BBB 29 529 24 HOH HOH . I 5 HOH BBB 30 530 194 HOH HOH . I 5 HOH BBB 31 531 129 HOH HOH . I 5 HOH BBB 32 532 48 HOH HOH . I 5 HOH BBB 33 533 41 HOH HOH . I 5 HOH BBB 34 534 174 HOH HOH . I 5 HOH BBB 35 535 14 HOH HOH . I 5 HOH BBB 36 536 88 HOH HOH . I 5 HOH BBB 37 537 13 HOH HOH . I 5 HOH BBB 38 538 188 HOH HOH . I 5 HOH BBB 39 539 62 HOH HOH . I 5 HOH BBB 40 540 11 HOH HOH . I 5 HOH BBB 41 541 190 HOH HOH . I 5 HOH BBB 42 542 19 HOH HOH . I 5 HOH BBB 43 543 31 HOH HOH . I 5 HOH BBB 44 544 72 HOH HOH . I 5 HOH BBB 45 545 50 HOH HOH . I 5 HOH BBB 46 546 192 HOH HOH . I 5 HOH BBB 47 547 69 HOH HOH . I 5 HOH BBB 48 548 43 HOH HOH . I 5 HOH BBB 49 549 168 HOH HOH . I 5 HOH BBB 50 550 191 HOH HOH . I 5 HOH BBB 51 551 25 HOH HOH . I 5 HOH BBB 52 552 124 HOH HOH . I 5 HOH BBB 53 553 90 HOH HOH . I 5 HOH BBB 54 554 106 HOH HOH . I 5 HOH BBB 55 555 79 HOH HOH . I 5 HOH BBB 56 556 36 HOH HOH . I 5 HOH BBB 57 557 161 HOH HOH . I 5 HOH BBB 58 558 42 HOH HOH . I 5 HOH BBB 59 559 59 HOH HOH . I 5 HOH BBB 60 560 132 HOH HOH . I 5 HOH BBB 61 561 86 HOH HOH . I 5 HOH BBB 62 562 15 HOH HOH . I 5 HOH BBB 63 563 4 HOH HOH . I 5 HOH BBB 64 564 142 HOH HOH . I 5 HOH BBB 65 565 157 HOH HOH . I 5 HOH BBB 66 566 5 HOH HOH . I 5 HOH BBB 67 567 104 HOH HOH . I 5 HOH BBB 68 568 93 HOH HOH . I 5 HOH BBB 69 569 159 HOH HOH . I 5 HOH BBB 70 570 10 HOH HOH . I 5 HOH BBB 71 571 85 HOH HOH . I 5 HOH BBB 72 572 37 HOH HOH . I 5 HOH BBB 73 573 167 HOH HOH . I 5 HOH BBB 74 574 83 HOH HOH . I 5 HOH BBB 75 575 110 HOH HOH . I 5 HOH BBB 76 576 193 HOH HOH . I 5 HOH BBB 77 577 120 HOH HOH . I 5 HOH BBB 78 578 55 HOH HOH . I 5 HOH BBB 79 579 152 HOH HOH . I 5 HOH BBB 80 580 145 HOH HOH . I 5 HOH BBB 81 581 52 HOH HOH . I 5 HOH BBB 82 582 186 HOH HOH . I 5 HOH BBB 83 583 131 HOH HOH . I 5 HOH BBB 84 584 130 HOH HOH . I 5 HOH BBB 85 585 135 HOH HOH . I 5 HOH BBB 86 586 139 HOH HOH . I 5 HOH BBB 87 587 117 HOH HOH . I 5 HOH BBB 88 588 103 HOH HOH . I 5 HOH BBB 89 589 33 HOH HOH . I 5 HOH BBB 90 590 165 HOH HOH . I 5 HOH BBB 91 591 150 HOH HOH . I 5 HOH BBB 92 592 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 42.254 18.668 2.682 1 45.92 0 C1 GOL 403 BBB 1 HETATM 2 O O1 GOL . . . G 4 42.218 17.655 3.682 1 47.01 0 O1 GOL 403 BBB 1 HETATM 3 C C2 GOL . . . G 4 41.626 19.974 3.124 1 45.81 0 C2 GOL 403 BBB 1 HETATM 4 O O2 GOL . . . G 4 42.645 20.972 3.162 1 47.99 0 O2 GOL 403 BBB 1 HETATM 5 C C3 GOL . . . G 4 40.485 20.462 2.247 1 46.75 0 C3 GOL 403 BBB 1 HETATM 6 O O3 GOL . . . G 4 39.337 20.833 3.01 1 43.34 0 O3 GOL 403 BBB 1 HETATM 7 H H11 GOL . . . G 4 41.761 18.354 1.883 1 45.92 0 H11 GOL 403 BBB 1 HETATM 8 H H12 GOL . . . G 4 43.196 18.855 2.442 1 45.92 0 H12 GOL 403 BBB 1 HETATM 9 H HO1 GOL . . . G 4 42.583 16.959 3.368 0 47.01 0 HO1 GOL 403 BBB 1 HETATM 10 H H2 GOL . . . G 4 41.265 19.854 4.038 1 45.81 0 H2 GOL 403 BBB 1 HETATM 11 H HO2 GOL . . . G 4 42.39 21.624 2.684 0 47.99 0 HO2 GOL 403 BBB 1 HETATM 12 H H31 GOL . . . G 4 40.221 19.74 1.623 1 46.75 0 H31 GOL 403 BBB 1 HETATM 13 H H32 GOL . . . G 4 40.783 21.254 1.733 1 46.75 0 H32 GOL 403 BBB 1 HETATM 14 H HO3 GOL . . . G 4 39.511 20.709 3.829 1 43.34 0 HO3 GOL 403 BBB 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 14 #