data_7QNN # _model_server_result.job_id U1O5eG3CBiwawZLPwHGpZw _model_server_result.datetime_utc '2024-11-06 00:46:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qnn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7QNN # _exptl.entry_id 7QNN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 348.438 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl 1-(cyclopentylmethyl)-5-pyridin-4-yl-indole-2-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7QNN _cell.length_a 54.364 _cell.length_b 120.02 _cell.length_c 145.615 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QNN _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 362 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 377 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id HEM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HEM _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.321 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C22 H24 N2 O2' _chem_comp.formula_weight 348.438 _chem_comp.id E93 _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl 1-(cyclopentylmethyl)-5-pyridin-4-yl-indole-2-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C11 E93 doub 83 n y N1 C12 E93 sing 84 n y C11 C10 E93 sing 85 n y C12 C13 E93 doub 86 n y C10 C9 E93 doub 87 n y C13 C9 E93 sing 88 n y C9 C8 E93 sing 89 n n C8 C14 E93 doub 90 n y C8 C7 E93 sing 91 n y C14 C15 E93 sing 92 n y C7 C6 E93 doub 93 n y C15 C16 E93 doub 94 n y C6 C16 E93 sing 95 n y C6 C5 E93 sing 96 n y C16 N2 E93 sing 97 n y C5 C4 E93 doub 98 n y N2 C4 E93 sing 99 n y N2 C17 E93 sing 100 n n C4 C3 E93 sing 101 n n C17 C18 E93 sing 102 n n C18 C19 E93 sing 103 n n C18 C22 E93 sing 104 n n C19 C20 E93 sing 105 n n C3 O1 E93 sing 106 n n C3 O2 E93 doub 107 n n C22 C21 E93 sing 108 n n O1 C2 E93 sing 109 n n C20 C21 E93 sing 110 n n C2 C1 E93 sing 111 n n C1 H1 E93 sing 112 n n C1 H3 E93 sing 113 n n C1 H2 E93 sing 114 n n C10 H8 E93 sing 115 n n C11 H9 E93 sing 116 n n C12 H10 E93 sing 117 n n C13 H11 E93 sing 118 n n C14 H12 E93 sing 119 n n C15 H13 E93 sing 120 n n C17 H15 E93 sing 121 n n C17 H14 E93 sing 122 n n C18 H16 E93 sing 123 n n C19 H17 E93 sing 124 n n C19 H18 E93 sing 125 n n C2 H5 E93 sing 126 n n C2 H4 E93 sing 127 n n C20 H20 E93 sing 128 n n C20 H19 E93 sing 129 n n C21 H21 E93 sing 130 n n C21 H22 E93 sing 131 n n C22 H23 E93 sing 132 n n C22 H24 E93 sing 133 n n C5 H6 E93 sing 134 n n C7 H7 E93 sing 135 n n # _atom_sites.entry_id 7QNN _atom_sites.fract_transf_matrix[1][1] 0.018395 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008332 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006867 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 501 HEM HEM . C 3 E93 A 1 502 502 E93 459 . D 4 HOH A 1 601 80 HOH HOH . D 4 HOH A 2 602 88 HOH HOH . D 4 HOH A 3 603 40 HOH HOH . D 4 HOH A 4 604 44 HOH HOH . D 4 HOH A 5 605 7 HOH HOH . D 4 HOH A 6 606 38 HOH HOH . D 4 HOH A 7 607 19 HOH HOH . D 4 HOH A 8 608 15 HOH HOH . D 4 HOH A 9 609 21 HOH HOH . D 4 HOH A 10 610 84 HOH HOH . D 4 HOH A 11 611 42 HOH HOH . D 4 HOH A 12 612 113 HOH HOH . D 4 HOH A 13 613 82 HOH HOH . D 4 HOH A 14 614 115 HOH HOH . D 4 HOH A 15 615 91 HOH HOH . D 4 HOH A 16 616 114 HOH HOH . D 4 HOH A 17 617 121 HOH HOH . D 4 HOH A 18 618 27 HOH HOH . D 4 HOH A 19 619 94 HOH HOH . D 4 HOH A 20 620 65 HOH HOH . D 4 HOH A 21 621 10 HOH HOH . D 4 HOH A 22 622 71 HOH HOH . D 4 HOH A 23 623 29 HOH HOH . D 4 HOH A 24 624 69 HOH HOH . D 4 HOH A 25 625 86 HOH HOH . D 4 HOH A 26 626 32 HOH HOH . D 4 HOH A 27 627 64 HOH HOH . D 4 HOH A 28 628 26 HOH HOH . D 4 HOH A 29 629 43 HOH HOH . D 4 HOH A 30 630 13 HOH HOH . D 4 HOH A 31 631 116 HOH HOH . D 4 HOH A 32 632 109 HOH HOH . D 4 HOH A 33 633 22 HOH HOH . D 4 HOH A 34 634 11 HOH HOH . D 4 HOH A 35 635 5 HOH HOH . D 4 HOH A 36 636 58 HOH HOH . D 4 HOH A 37 637 48 HOH HOH . D 4 HOH A 38 638 46 HOH HOH . D 4 HOH A 39 639 1 HOH HOH . D 4 HOH A 40 640 41 HOH HOH . D 4 HOH A 41 641 9 HOH HOH . D 4 HOH A 42 642 89 HOH HOH . D 4 HOH A 43 643 39 HOH HOH . D 4 HOH A 44 644 81 HOH HOH . D 4 HOH A 45 645 18 HOH HOH . D 4 HOH A 46 646 90 HOH HOH . D 4 HOH A 47 647 117 HOH HOH . D 4 HOH A 48 648 3 HOH HOH . D 4 HOH A 49 649 16 HOH HOH . D 4 HOH A 50 650 17 HOH HOH . D 4 HOH A 51 651 8 HOH HOH . D 4 HOH A 52 652 4 HOH HOH . D 4 HOH A 53 653 36 HOH HOH . D 4 HOH A 54 654 61 HOH HOH . D 4 HOH A 55 655 31 HOH HOH . D 4 HOH A 56 656 119 HOH HOH . D 4 HOH A 57 657 99 HOH HOH . D 4 HOH A 58 658 57 HOH HOH . D 4 HOH A 59 659 56 HOH HOH . D 4 HOH A 60 660 24 HOH HOH . D 4 HOH A 61 661 23 HOH HOH . D 4 HOH A 62 662 62 HOH HOH . D 4 HOH A 63 663 70 HOH HOH . D 4 HOH A 64 664 92 HOH HOH . D 4 HOH A 65 665 20 HOH HOH . D 4 HOH A 66 666 83 HOH HOH . D 4 HOH A 67 667 66 HOH HOH . D 4 HOH A 68 668 30 HOH HOH . D 4 HOH A 69 669 12 HOH HOH . D 4 HOH A 70 670 67 HOH HOH . D 4 HOH A 71 671 72 HOH HOH . D 4 HOH A 72 672 120 HOH HOH . D 4 HOH A 73 673 34 HOH HOH . D 4 HOH A 74 674 6 HOH HOH . D 4 HOH A 75 675 35 HOH HOH . D 4 HOH A 76 676 60 HOH HOH . D 4 HOH A 77 677 2 HOH HOH . D 4 HOH A 78 678 55 HOH HOH . D 4 HOH A 79 679 50 HOH HOH . D 4 HOH A 80 680 79 HOH HOH . D 4 HOH A 81 681 85 HOH HOH . D 4 HOH A 82 682 75 HOH HOH . D 4 HOH A 83 683 28 HOH HOH . D 4 HOH A 84 684 54 HOH HOH . D 4 HOH A 85 685 45 HOH HOH . D 4 HOH A 86 686 76 HOH HOH . D 4 HOH A 87 687 47 HOH HOH . D 4 HOH A 88 688 25 HOH HOH . D 4 HOH A 89 689 78 HOH HOH . D 4 HOH A 90 690 74 HOH HOH . D 4 HOH A 91 691 96 HOH HOH . D 4 HOH A 92 692 101 HOH HOH . D 4 HOH A 93 693 105 HOH HOH . D 4 HOH A 94 694 106 HOH HOH . D 4 HOH A 95 695 33 HOH HOH . D 4 HOH A 96 696 51 HOH HOH . D 4 HOH A 97 697 77 HOH HOH . D 4 HOH A 98 698 63 HOH HOH . D 4 HOH A 99 699 14 HOH HOH . D 4 HOH A 100 700 93 HOH HOH . D 4 HOH A 101 701 95 HOH HOH . D 4 HOH A 102 702 68 HOH HOH . D 4 HOH A 103 703 52 HOH HOH . D 4 HOH A 104 704 37 HOH HOH . D 4 HOH A 105 705 102 HOH HOH . D 4 HOH A 106 706 112 HOH HOH . D 4 HOH A 107 707 98 HOH HOH . D 4 HOH A 108 708 103 HOH HOH . D 4 HOH A 109 709 59 HOH HOH . D 4 HOH A 110 710 110 HOH HOH . D 4 HOH A 111 711 49 HOH HOH . D 4 HOH A 112 712 118 HOH HOH . D 4 HOH A 113 713 108 HOH HOH . D 4 HOH A 114 714 53 HOH HOH . D 4 HOH A 115 715 87 HOH HOH . D 4 HOH A 116 716 73 HOH HOH . D 4 HOH A 117 717 111 HOH HOH . D 4 HOH A 118 718 107 HOH HOH . D 4 HOH A 119 719 100 HOH HOH . D 4 HOH A 120 720 104 HOH HOH . D 4 HOH A 121 721 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 E93 . . . C 3 -25.395 -20.083 -1.26 1 85.02 ? C1 E93 502 A 1 HETATM 2 C C10 E93 . . . C 3 -20.98 -21.861 -11.467 1 65.99 ? C10 E93 502 A 1 HETATM 3 C C11 E93 . . . C 3 -21.208 -21.93 -12.827 1 66.85 ? C11 E93 502 A 1 HETATM 4 C C12 E93 . . . C 3 -23.41 -21.491 -12.552 1 65.16 ? C12 E93 502 A 1 HETATM 5 C C13 E93 . . . C 3 -23.267 -21.405 -11.181 1 71.43 ? C13 E93 502 A 1 HETATM 6 C C14 E93 . . . C 3 -20.515 -21.527 -8.609 1 73.38 ? C14 E93 502 A 1 HETATM 7 C C15 E93 . . . C 3 -20.273 -21.429 -7.252 1 80.8 ? C15 E93 502 A 1 HETATM 8 C C16 E93 . . . C 3 -21.37 -21.305 -6.404 1 86.69 ? C16 E93 502 A 1 HETATM 9 C C17 E93 . . . C 3 -20.277 -21.172 -4.109 1 102.52 ? C17 E93 502 A 1 HETATM 10 C C18 E93 . . . C 3 -19.409 -22.43 -4.208 1 106.91 ? C18 E93 502 A 1 HETATM 11 C C19 E93 . . . C 3 -17.964 -22.17 -3.758 1 111.97 ? C19 E93 502 A 1 HETATM 12 C C2 E93 . . . C 3 -25.185 -21.395 -1.908 1 82.96 ? C2 E93 502 A 1 HETATM 13 C C20 E93 . . . C 3 -17.645 -23.302 -2.791 1 105.41 ? C20 E93 502 A 1 HETATM 14 C C21 E93 . . . C 3 -18.954 -23.456 -2.083 1 97.85 ? C21 E93 502 A 1 HETATM 15 C C22 E93 . . . C 3 -19.86 -23.572 -3.295 1 105.08 ? C22 E93 502 A 1 HETATM 16 C C3 E93 . . . C 3 -23.284 -20.955 -3.281 1 86.01 ? C3 E93 502 A 1 HETATM 17 C C4 E93 . . . C 3 -22.785 -21.075 -4.646 1 83.55 ? C4 E93 502 A 1 HETATM 18 C C5 E93 . . . C 3 -23.551 -21.138 -5.78 1 76.74 ? C5 E93 502 A 1 HETATM 19 C C6 E93 . . . C 3 -22.691 -21.271 -6.902 1 77.71 ? C6 E93 502 A 1 HETATM 20 C C7 E93 . . . C 3 -22.905 -21.368 -8.277 1 76.85 ? C7 E93 502 A 1 HETATM 21 C C8 E93 . . . C 3 -21.821 -21.504 -9.138 1 74.71 ? C8 E93 502 A 1 HETATM 22 C C9 E93 . . . C 3 -22.027 -21.599 -10.607 1 71.15 ? C9 E93 502 A 1 HETATM 23 N N1 E93 . . . C 3 -22.404 -21.751 -13.384 1 66.34 ? N1 E93 502 A 1 HETATM 24 N N2 E93 . . . C 3 -21.432 -21.195 -5.024 1 89.34 ? N2 E93 502 A 1 HETATM 25 O O1 E93 . . . C 3 -24.592 -21.201 -3.226 1 81.37 ? O1 E93 502 A 1 HETATM 26 O O2 E93 . . . C 3 -22.603 -20.694 -2.318 1 90.07 ? O2 E93 502 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #