data_7QOC # _model_server_result.job_id kRkzOKe1iQdNqYoXbnWsOg _model_server_result.datetime_utc '2024-11-30 20:51:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qoc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7QOC # _exptl.entry_id 7QOC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7QOC _cell.length_a 96.01 _cell.length_b 96.01 _cell.length_c 80.47 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QOC _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 1 A MSE 1 1_555 A N ASN 2 A ASN 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale2 A C MSE 1 A MSE 1 1_555 A N ASN 2 A ASN 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale3 A C ALA 11 A ALA 11 1_555 A N MSE 12 A MSE 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale4 A C MSE 12 A MSE 12 1_555 A N ASN 13 A ASN 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.358 ? covale ? covale5 A C VAL 38 A VAL 38 1_555 A N MSE 39 A MSE 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale6 A C MSE 39 A MSE 39 1_555 A N TYR 40 A TYR 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale7 A C LEU 127 A LEU 127 1_555 A N MSE 128 A MSE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale8 A C MSE 128 A MSE 128 1_555 A N SER 129 A SER 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale9 B C MSE 1 B MSE 1 1_555 B N ASN 2 B ASN 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale10 B C MSE 1 B MSE 1 1_555 B N ASN 2 B ASN 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale11 B C ALA 11 B ALA 11 1_555 B N MSE 12 B MSE 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale12 B C MSE 12 B MSE 12 1_555 B N ASN 13 B ASN 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale13 B C VAL 38 B VAL 38 1_555 B N MSE 39 B MSE 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale14 B C MSE 39 B MSE 39 1_555 B N TYR 40 B TYR 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale15 B C LEU 127 B LEU 127 1_555 B N MSE 128 B MSE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale16 B C MSE 128 B MSE 128 1_555 B N SER 129 B SER 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? metalc ? metalc1 A OD2 ASP 59 A ASP 59 1_555 C MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc2 A OD1 ASP 122 A ASP 122 1_555 C MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc3 B OD2 ASP 59 B ASP 59 1_555 D MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc4 B OD1 ASP 122 B ASP 122 1_555 D MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7QOC _atom_sites.fract_transf_matrix[1][1] 0.010416 _atom_sites.fract_transf_matrix[1][2] 0.006013 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 201 201 MG MG . D 2 MG B 1 201 201 MG MG . E 3 HOH A 1 301 30 HOH HOH . E 3 HOH A 2 302 7 HOH HOH . E 3 HOH A 3 303 14 HOH HOH . E 3 HOH A 4 304 3 HOH HOH . E 3 HOH A 5 305 25 HOH HOH . E 3 HOH A 6 306 53 HOH HOH . E 3 HOH A 7 307 56 HOH HOH . E 3 HOH A 8 308 1 HOH HOH . E 3 HOH A 9 309 10 HOH HOH . E 3 HOH A 10 310 5 HOH HOH . E 3 HOH A 11 311 8 HOH HOH . F 3 HOH B 1 301 4 HOH HOH . F 3 HOH B 2 302 2 HOH HOH . F 3 HOH B 3 303 6 HOH HOH . F 3 HOH B 4 304 57 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 68.579 _atom_site.Cartn_y 1.367 _atom_site.Cartn_z 7.684 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 122.18 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #