data_7QTM # _model_server_result.job_id rfT-x5uYg8ovyV9hKGhzbA _model_server_result.datetime_utc '2024-11-14 21:53:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qtm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":202}' # _entry.id 7QTM # _exptl.entry_id 7QTM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 81.3 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRIFLUOROMAGNESATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.02 _cell.angle_gamma 90 _cell.entry_id 7QTM _cell.length_a 73.632 _cell.length_b 66.604 _cell.length_c 76.463 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QTM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C VAL 32 B VAL 33 1_555 B N F2Y 33 B F2Y 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale2 B C F2Y 33 B F2Y 34 1_555 B N VAL 34 B VAL 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 D C VAL 32 I VAL 33 1_555 D N F2Y 33 I F2Y 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale4 D C F2Y 33 I F2Y 34 1_555 D N VAL 34 I VAL 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? metalc ? metalc1 B OG1 THR 18 B THR 19 1_555 G MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc2 B OG1 THR 36 B THR 37 1_555 G MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc3 E O3B GDP . B GDP 201 1_555 F MG MGF . B MGF 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc4 E O2B GDP . B GDP 201 1_555 G MG MG . B MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc5 F MG MGF . B MGF 202 1_555 L O HOH . B HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc6 G MG MG . B MG 203 1_555 L O HOH . B HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc7 G MG MG . B MG 203 1_555 L O HOH . B HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc8 D OG1 THR 18 I THR 19 1_555 J MG MG . I MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc9 D OG1 THR 36 I THR 37 1_555 J MG MG . I MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc10 H O3B GDP . I GDP 201 1_555 I MG MGF . I MGF 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc11 H O1B GDP . I GDP 201 1_555 J MG MG . I MG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc12 I MG MGF . I MGF 202 1_555 N O HOH . I HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc13 J MG MG . I MG 203 1_555 N O HOH . I HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc14 J MG MG . I MG 203 1_555 N O HOH . I HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? # _chem_comp.formula 'F3 Mg -1' _chem_comp.formula_weight 81.3 _chem_comp.id MGF _chem_comp.mon_nstd_flag . _chem_comp.name TRIFLUOROMAGNESATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 MG MGF sing 306 n n MG F2 MGF sing 307 n n MG F3 MGF sing 308 n n # _atom_sites.entry_id 7QTM _atom_sites.fract_transf_matrix[1][1] 0.013581 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001192 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015014 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013129 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GDP B 1 201 202 GDP GDP . F 4 MGF B 1 202 203 MGF MGF . G 5 MG B 1 203 1 MG MG . H 3 GDP I 1 201 202 GDP GDP . I 4 MGF I 1 202 203 MGF MGF . J 5 MG I 1 203 2 MG MG . K 6 HOH A 1 301 116 HOH HOH . K 6 HOH A 2 302 144 HOH HOH . K 6 HOH A 3 303 13 HOH HOH . K 6 HOH A 4 304 83 HOH HOH . K 6 HOH A 5 305 26 HOH HOH . K 6 HOH A 6 306 24 HOH HOH . K 6 HOH A 7 307 84 HOH HOH . K 6 HOH A 8 308 113 HOH HOH . K 6 HOH A 9 309 6 HOH HOH . K 6 HOH A 10 310 81 HOH HOH . K 6 HOH A 11 311 42 HOH HOH . K 6 HOH A 12 312 44 HOH HOH . K 6 HOH A 13 313 61 HOH HOH . K 6 HOH A 14 314 155 HOH HOH . K 6 HOH A 15 315 7 HOH HOH . K 6 HOH A 16 316 2 HOH HOH . K 6 HOH A 17 317 33 HOH HOH . K 6 HOH A 18 318 72 HOH HOH . K 6 HOH A 19 319 178 HOH HOH . K 6 HOH A 20 320 50 HOH HOH . K 6 HOH A 21 321 110 HOH HOH . K 6 HOH A 22 322 111 HOH HOH . K 6 HOH A 23 323 140 HOH HOH . K 6 HOH A 24 324 109 HOH HOH . K 6 HOH A 25 325 164 HOH HOH . K 6 HOH A 26 326 165 HOH HOH . K 6 HOH A 27 327 170 HOH HOH . L 6 HOH B 1 301 51 HOH HOH . L 6 HOH B 2 302 15 HOH HOH . L 6 HOH B 3 303 74 HOH HOH . L 6 HOH B 4 304 23 HOH HOH . L 6 HOH B 5 305 52 HOH HOH . L 6 HOH B 6 306 169 HOH HOH . L 6 HOH B 7 307 149 HOH HOH . L 6 HOH B 8 308 27 HOH HOH . L 6 HOH B 9 309 48 HOH HOH . L 6 HOH B 10 310 112 HOH HOH . L 6 HOH B 11 311 63 HOH HOH . L 6 HOH B 12 312 46 HOH HOH . L 6 HOH B 13 313 150 HOH HOH . L 6 HOH B 14 314 145 HOH HOH . L 6 HOH B 15 315 86 HOH HOH . L 6 HOH B 16 316 49 HOH HOH . L 6 HOH B 17 317 133 HOH HOH . L 6 HOH B 18 318 20 HOH HOH . L 6 HOH B 19 319 172 HOH HOH . L 6 HOH B 20 320 47 HOH HOH . L 6 HOH B 21 321 45 HOH HOH . L 6 HOH B 22 322 131 HOH HOH . L 6 HOH B 23 323 132 HOH HOH . L 6 HOH B 24 324 35 HOH HOH . L 6 HOH B 25 325 79 HOH HOH . L 6 HOH B 26 326 90 HOH HOH . L 6 HOH B 27 327 103 HOH HOH . L 6 HOH B 28 328 154 HOH HOH . L 6 HOH B 29 329 80 HOH HOH . L 6 HOH B 30 330 8 HOH HOH . L 6 HOH B 31 331 4 HOH HOH . L 6 HOH B 32 332 163 HOH HOH . L 6 HOH B 33 333 25 HOH HOH . L 6 HOH B 34 334 183 HOH HOH . L 6 HOH B 35 335 125 HOH HOH . L 6 HOH B 36 336 66 HOH HOH . L 6 HOH B 37 337 75 HOH HOH . L 6 HOH B 38 338 148 HOH HOH . L 6 HOH B 39 339 130 HOH HOH . L 6 HOH B 40 340 181 HOH HOH . L 6 HOH B 41 341 67 HOH HOH . L 6 HOH B 42 342 91 HOH HOH . L 6 HOH B 43 343 71 HOH HOH . M 6 HOH H 1 301 123 HOH HOH . M 6 HOH H 2 302 3 HOH HOH . M 6 HOH H 3 303 120 HOH HOH . M 6 HOH H 4 304 146 HOH HOH . M 6 HOH H 5 305 1 HOH HOH . M 6 HOH H 6 306 102 HOH HOH . M 6 HOH H 7 307 171 HOH HOH . M 6 HOH H 8 308 12 HOH HOH . M 6 HOH H 9 309 14 HOH HOH . M 6 HOH H 10 310 59 HOH HOH . M 6 HOH H 11 311 77 HOH HOH . M 6 HOH H 12 312 37 HOH HOH . M 6 HOH H 13 313 106 HOH HOH . M 6 HOH H 14 314 114 HOH HOH . M 6 HOH H 15 315 16 HOH HOH . M 6 HOH H 16 316 18 HOH HOH . M 6 HOH H 17 317 10 HOH HOH . M 6 HOH H 18 318 168 HOH HOH . M 6 HOH H 19 319 76 HOH HOH . M 6 HOH H 20 320 129 HOH HOH . M 6 HOH H 21 321 143 HOH HOH . M 6 HOH H 22 322 32 HOH HOH . M 6 HOH H 23 323 160 HOH HOH . M 6 HOH H 24 324 128 HOH HOH . M 6 HOH H 25 325 142 HOH HOH . M 6 HOH H 26 326 118 HOH HOH . M 6 HOH H 27 327 156 HOH HOH . M 6 HOH H 28 328 175 HOH HOH . M 6 HOH H 29 329 5 HOH HOH . M 6 HOH H 30 330 39 HOH HOH . M 6 HOH H 31 331 141 HOH HOH . M 6 HOH H 32 332 167 HOH HOH . M 6 HOH H 33 333 119 HOH HOH . M 6 HOH H 34 334 115 HOH HOH . M 6 HOH H 35 335 21 HOH HOH . M 6 HOH H 36 336 29 HOH HOH . M 6 HOH H 37 337 93 HOH HOH . M 6 HOH H 38 338 104 HOH HOH . M 6 HOH H 39 339 34 HOH HOH . M 6 HOH H 40 340 153 HOH HOH . M 6 HOH H 41 341 70 HOH HOH . M 6 HOH H 42 342 185 HOH HOH . M 6 HOH H 43 343 126 HOH HOH . M 6 HOH H 44 344 161 HOH HOH . M 6 HOH H 45 345 176 HOH HOH . M 6 HOH H 46 346 157 HOH HOH . M 6 HOH H 47 347 166 HOH HOH . M 6 HOH H 48 348 147 HOH HOH . M 6 HOH H 49 349 105 HOH HOH . N 6 HOH I 1 301 62 HOH HOH . N 6 HOH I 2 302 53 HOH HOH . N 6 HOH I 3 303 162 HOH HOH . N 6 HOH I 4 304 55 HOH HOH . N 6 HOH I 5 305 95 HOH HOH . N 6 HOH I 6 306 98 HOH HOH . N 6 HOH I 7 307 180 HOH HOH . N 6 HOH I 8 308 38 HOH HOH . N 6 HOH I 9 309 54 HOH HOH . N 6 HOH I 10 310 135 HOH HOH . N 6 HOH I 11 311 28 HOH HOH . N 6 HOH I 12 312 57 HOH HOH . N 6 HOH I 13 313 92 HOH HOH . N 6 HOH I 14 314 19 HOH HOH . N 6 HOH I 15 315 82 HOH HOH . N 6 HOH I 16 316 136 HOH HOH . N 6 HOH I 17 317 22 HOH HOH . N 6 HOH I 18 318 11 HOH HOH . N 6 HOH I 19 319 108 HOH HOH . N 6 HOH I 20 320 137 HOH HOH . N 6 HOH I 21 321 60 HOH HOH . N 6 HOH I 22 322 58 HOH HOH . N 6 HOH I 23 323 40 HOH HOH . N 6 HOH I 24 324 43 HOH HOH . N 6 HOH I 25 325 64 HOH HOH . N 6 HOH I 26 326 96 HOH HOH . N 6 HOH I 27 327 134 HOH HOH . N 6 HOH I 28 328 17 HOH HOH . N 6 HOH I 29 329 138 HOH HOH . N 6 HOH I 30 330 97 HOH HOH . N 6 HOH I 31 331 30 HOH HOH . N 6 HOH I 32 332 73 HOH HOH . N 6 HOH I 33 333 151 HOH HOH . N 6 HOH I 34 334 107 HOH HOH . N 6 HOH I 35 335 31 HOH HOH . N 6 HOH I 36 336 9 HOH HOH . N 6 HOH I 37 337 174 HOH HOH . N 6 HOH I 38 338 184 HOH HOH . N 6 HOH I 39 339 100 HOH HOH . N 6 HOH I 40 340 173 HOH HOH . N 6 HOH I 41 341 182 HOH HOH . N 6 HOH I 42 342 68 HOH HOH . N 6 HOH I 43 343 177 HOH HOH . N 6 HOH I 44 344 158 HOH HOH . N 6 HOH I 45 345 65 HOH HOH . N 6 HOH I 46 346 122 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F1 MGF . . . I 4 -23.737 -8.727 26.847 1 29.46 ? F1 MGF 202 I 1 HETATM 2 MG MG MGF . . . I 4 -24.488 -9.862 28.101 1 26.07 ? MG MGF 202 I 1 HETATM 3 F F2 MGF . . . I 4 -26.079 -10.766 27.821 1 20.97 ? F2 MGF 202 I 1 HETATM 4 F F3 MGF . . . I 4 -23.473 -10.08 29.655 1 22.93 ? F3 MGF 202 I 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 381 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #