data_7QU3 # _model_server_result.job_id qP0Ue1iwz6boMdzG-ikvkQ _model_server_result.datetime_utc '2025-01-10 08:22:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 7QU3 # _exptl.entry_id 7QU3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7QU3 _cell.length_a 49.543 _cell.length_b 57.669 _cell.length_c 101.44 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . A MG 503 1_555 I O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 D MG MG . A MG 503 1_555 I O HOH . A HOH 661 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc3 D MG MG . A MG 503 1_555 I O HOH . A HOH 680 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc4 D MG MG . A MG 503 1_555 I O HOH . A HOH 721 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc5 D MG MG . A MG 503 1_555 I O HOH . A HOH 812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc6 D MG MG . A MG 503 1_555 I O HOH . A HOH 815 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7QU3 _atom_sites.fract_transf_matrix[1][1] 0.020184 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01734 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009858 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 501 501 FAD FAD . C 3 RYM A 1 502 502 RYM UNL . D 4 MG A 1 503 503 MG MG . E 5 DMS A 1 504 504 DMS DMS . F 5 DMS A 1 505 505 DMS DMS . G 5 DMS A 1 506 506 DMS DMS . H 5 DMS A 1 507 507 DMS DMS . I 6 HOH A 1 601 737 HOH HOH . I 6 HOH A 2 602 727 HOH HOH . I 6 HOH A 3 603 774 HOH HOH . I 6 HOH A 4 604 790 HOH HOH . I 6 HOH A 5 605 744 HOH HOH . I 6 HOH A 6 606 826 HOH HOH . I 6 HOH A 7 607 767 HOH HOH . I 6 HOH A 8 608 789 HOH HOH . I 6 HOH A 9 609 828 HOH HOH . I 6 HOH A 10 610 778 HOH HOH . I 6 HOH A 11 611 735 HOH HOH . I 6 HOH A 12 612 819 HOH HOH . I 6 HOH A 13 613 729 HOH HOH . I 6 HOH A 14 614 754 HOH HOH . I 6 HOH A 15 615 725 HOH HOH . I 6 HOH A 16 616 610 HOH HOH . I 6 HOH A 17 617 672 HOH HOH . I 6 HOH A 18 618 761 HOH HOH . I 6 HOH A 19 619 631 HOH HOH . I 6 HOH A 20 620 654 HOH HOH . I 6 HOH A 21 621 829 HOH HOH . I 6 HOH A 22 622 747 HOH HOH . I 6 HOH A 23 623 617 HOH HOH . I 6 HOH A 24 624 646 HOH HOH . I 6 HOH A 25 625 673 HOH HOH . I 6 HOH A 26 626 801 HOH HOH . I 6 HOH A 27 627 639 HOH HOH . I 6 HOH A 28 628 614 HOH HOH . I 6 HOH A 29 629 830 HOH HOH . I 6 HOH A 30 630 613 HOH HOH . I 6 HOH A 31 631 605 HOH HOH . I 6 HOH A 32 632 628 HOH HOH . I 6 HOH A 33 633 817 HOH HOH . I 6 HOH A 34 634 745 HOH HOH . I 6 HOH A 35 635 650 HOH HOH . I 6 HOH A 36 636 668 HOH HOH . I 6 HOH A 37 637 690 HOH HOH . I 6 HOH A 38 638 797 HOH HOH . I 6 HOH A 39 639 659 HOH HOH . I 6 HOH A 40 640 799 HOH HOH . I 6 HOH A 41 641 791 HOH HOH . I 6 HOH A 42 642 640 HOH HOH . I 6 HOH A 43 643 611 HOH HOH . I 6 HOH A 44 644 723 HOH HOH . I 6 HOH A 45 645 760 HOH HOH . I 6 HOH A 46 646 625 HOH HOH . I 6 HOH A 47 647 687 HOH HOH . I 6 HOH A 48 648 607 HOH HOH . I 6 HOH A 49 649 619 HOH HOH . I 6 HOH A 50 650 759 HOH HOH . I 6 HOH A 51 651 635 HOH HOH . I 6 HOH A 52 652 630 HOH HOH . I 6 HOH A 53 653 782 HOH HOH . I 6 HOH A 54 654 824 HOH HOH . I 6 HOH A 55 655 670 HOH HOH . I 6 HOH A 56 656 742 HOH HOH . I 6 HOH A 57 657 688 HOH HOH . I 6 HOH A 58 658 693 HOH HOH . I 6 HOH A 59 659 633 HOH HOH . I 6 HOH A 60 660 783 HOH HOH . I 6 HOH A 61 661 695 HOH HOH . I 6 HOH A 62 662 763 HOH HOH . I 6 HOH A 63 663 602 HOH HOH . I 6 HOH A 64 664 698 HOH HOH . I 6 HOH A 65 665 671 HOH HOH . I 6 HOH A 66 666 769 HOH HOH . I 6 HOH A 67 667 661 HOH HOH . I 6 HOH A 68 668 615 HOH HOH . I 6 HOH A 69 669 706 HOH HOH . I 6 HOH A 70 670 612 HOH HOH . I 6 HOH A 71 671 807 HOH HOH . I 6 HOH A 72 672 609 HOH HOH . I 6 HOH A 73 673 652 HOH HOH . I 6 HOH A 74 674 764 HOH HOH . I 6 HOH A 75 675 740 HOH HOH . I 6 HOH A 76 676 812 HOH HOH . I 6 HOH A 77 677 622 HOH HOH . I 6 HOH A 78 678 738 HOH HOH . I 6 HOH A 79 679 728 HOH HOH . I 6 HOH A 80 680 680 HOH HOH . I 6 HOH A 81 681 618 HOH HOH . I 6 HOH A 82 682 795 HOH HOH . I 6 HOH A 83 683 649 HOH HOH . I 6 HOH A 84 684 766 HOH HOH . I 6 HOH A 85 685 823 HOH HOH . I 6 HOH A 86 686 748 HOH HOH . I 6 HOH A 87 687 644 HOH HOH . I 6 HOH A 88 688 634 HOH HOH . I 6 HOH A 89 689 773 HOH HOH . I 6 HOH A 90 690 626 HOH HOH . I 6 HOH A 91 691 660 HOH HOH . I 6 HOH A 92 692 679 HOH HOH . I 6 HOH A 93 693 682 HOH HOH . I 6 HOH A 94 694 749 HOH HOH . I 6 HOH A 95 695 637 HOH HOH . I 6 HOH A 96 696 678 HOH HOH . I 6 HOH A 97 697 666 HOH HOH . I 6 HOH A 98 698 733 HOH HOH . I 6 HOH A 99 699 753 HOH HOH . I 6 HOH A 100 700 683 HOH HOH . I 6 HOH A 101 701 623 HOH HOH . I 6 HOH A 102 702 638 HOH HOH . I 6 HOH A 103 703 804 HOH HOH . I 6 HOH A 104 704 674 HOH HOH . I 6 HOH A 105 705 705 HOH HOH . I 6 HOH A 106 706 662 HOH HOH . I 6 HOH A 107 707 697 HOH HOH . I 6 HOH A 108 708 730 HOH HOH . I 6 HOH A 109 709 632 HOH HOH . I 6 HOH A 110 710 667 HOH HOH . I 6 HOH A 111 711 620 HOH HOH . I 6 HOH A 112 712 805 HOH HOH . I 6 HOH A 113 713 713 HOH HOH . I 6 HOH A 114 714 658 HOH HOH . I 6 HOH A 115 715 768 HOH HOH . I 6 HOH A 116 716 636 HOH HOH . I 6 HOH A 117 717 707 HOH HOH . I 6 HOH A 118 718 703 HOH HOH . I 6 HOH A 119 719 780 HOH HOH . I 6 HOH A 120 720 700 HOH HOH . I 6 HOH A 121 721 701 HOH HOH . I 6 HOH A 122 722 686 HOH HOH . I 6 HOH A 123 723 825 HOH HOH . I 6 HOH A 124 724 750 HOH HOH . I 6 HOH A 125 725 677 HOH HOH . I 6 HOH A 126 726 786 HOH HOH . I 6 HOH A 127 727 785 HOH HOH . I 6 HOH A 128 728 655 HOH HOH . I 6 HOH A 129 729 641 HOH HOH . I 6 HOH A 130 730 771 HOH HOH . I 6 HOH A 131 731 627 HOH HOH . I 6 HOH A 132 732 621 HOH HOH . I 6 HOH A 133 733 629 HOH HOH . I 6 HOH A 134 734 651 HOH HOH . I 6 HOH A 135 735 606 HOH HOH . I 6 HOH A 136 736 757 HOH HOH . I 6 HOH A 137 737 604 HOH HOH . I 6 HOH A 138 738 643 HOH HOH . I 6 HOH A 139 739 708 HOH HOH . I 6 HOH A 140 740 758 HOH HOH . I 6 HOH A 141 741 722 HOH HOH . I 6 HOH A 142 742 603 HOH HOH . I 6 HOH A 143 743 704 HOH HOH . I 6 HOH A 144 744 676 HOH HOH . I 6 HOH A 145 745 710 HOH HOH . I 6 HOH A 146 746 746 HOH HOH . I 6 HOH A 147 747 731 HOH HOH . I 6 HOH A 148 748 794 HOH HOH . I 6 HOH A 149 749 608 HOH HOH . I 6 HOH A 150 750 681 HOH HOH . I 6 HOH A 151 751 663 HOH HOH . I 6 HOH A 152 752 657 HOH HOH . I 6 HOH A 153 753 685 HOH HOH . I 6 HOH A 154 754 647 HOH HOH . I 6 HOH A 155 755 784 HOH HOH . I 6 HOH A 156 756 696 HOH HOH . I 6 HOH A 157 757 624 HOH HOH . I 6 HOH A 158 758 724 HOH HOH . I 6 HOH A 159 759 781 HOH HOH . I 6 HOH A 160 760 692 HOH HOH . I 6 HOH A 161 761 694 HOH HOH . I 6 HOH A 162 762 669 HOH HOH . I 6 HOH A 163 763 802 HOH HOH . I 6 HOH A 164 764 645 HOH HOH . I 6 HOH A 165 765 798 HOH HOH . I 6 HOH A 166 766 601 HOH HOH . I 6 HOH A 167 767 684 HOH HOH . I 6 HOH A 168 768 815 HOH HOH . I 6 HOH A 169 769 732 HOH HOH . I 6 HOH A 170 770 648 HOH HOH . I 6 HOH A 171 771 827 HOH HOH . I 6 HOH A 172 772 665 HOH HOH . I 6 HOH A 173 773 1431 HOH HOH . I 6 HOH A 174 774 664 HOH HOH . I 6 HOH A 175 775 800 HOH HOH . I 6 HOH A 176 776 712 HOH HOH . I 6 HOH A 177 777 616 HOH HOH . I 6 HOH A 178 778 720 HOH HOH . I 6 HOH A 179 779 756 HOH HOH . I 6 HOH A 180 780 736 HOH HOH . I 6 HOH A 181 781 689 HOH HOH . I 6 HOH A 182 782 721 HOH HOH . I 6 HOH A 183 783 752 HOH HOH . I 6 HOH A 184 784 702 HOH HOH . I 6 HOH A 185 785 675 HOH HOH . I 6 HOH A 186 786 787 HOH HOH . I 6 HOH A 187 787 811 HOH HOH . I 6 HOH A 188 788 779 HOH HOH . I 6 HOH A 189 789 806 HOH HOH . I 6 HOH A 190 790 816 HOH HOH . I 6 HOH A 191 791 813 HOH HOH . I 6 HOH A 192 792 792 HOH HOH . I 6 HOH A 193 793 714 HOH HOH . I 6 HOH A 194 794 715 HOH HOH . I 6 HOH A 195 795 814 HOH HOH . I 6 HOH A 196 796 739 HOH HOH . I 6 HOH A 197 797 699 HOH HOH . I 6 HOH A 198 798 755 HOH HOH . I 6 HOH A 199 799 810 HOH HOH . I 6 HOH A 200 800 793 HOH HOH . I 6 HOH A 201 801 820 HOH HOH . I 6 HOH A 202 802 772 HOH HOH . I 6 HOH A 203 803 734 HOH HOH . I 6 HOH A 204 804 822 HOH HOH . I 6 HOH A 205 805 809 HOH HOH . I 6 HOH A 206 806 642 HOH HOH . I 6 HOH A 207 807 711 HOH HOH . I 6 HOH A 208 808 818 HOH HOH . I 6 HOH A 209 809 803 HOH HOH . I 6 HOH A 210 810 741 HOH HOH . I 6 HOH A 211 811 821 HOH HOH . I 6 HOH A 212 812 726 HOH HOH . I 6 HOH A 213 813 653 HOH HOH . I 6 HOH A 214 814 770 HOH HOH . I 6 HOH A 215 815 718 HOH HOH . I 6 HOH A 216 816 776 HOH HOH . I 6 HOH A 217 817 656 HOH HOH . I 6 HOH A 218 818 709 HOH HOH . I 6 HOH A 219 819 716 HOH HOH . I 6 HOH A 220 820 751 HOH HOH . I 6 HOH A 221 821 762 HOH HOH . I 6 HOH A 222 822 691 HOH HOH . I 6 HOH A 223 823 743 HOH HOH . I 6 HOH A 224 824 719 HOH HOH . I 6 HOH A 225 825 777 HOH HOH . I 6 HOH A 226 826 717 HOH HOH . I 6 HOH A 227 827 808 HOH HOH . I 6 HOH A 228 828 796 HOH HOH . I 6 HOH A 229 829 775 HOH HOH . I 6 HOH A 230 830 788 HOH HOH . I 6 HOH A 231 831 765 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . F 5 -4.183 -8.754 -31.26 1 51.88 ? S DMS 505 A 1 HETATM 2 O O DMS . . . F 5 -2.773 -8.159 -31.162 1 42.3 ? O DMS 505 A 1 HETATM 3 C C1 DMS . . . F 5 -4.924 -9.225 -29.672 1 44.83 ? C1 DMS 505 A 1 HETATM 4 C C2 DMS . . . F 5 -4.182 -10.282 -32.208 1 41.99 ? C2 DMS 505 A 1 HETATM 5 H H11 DMS . . . F 5 -5.974 -9.309 -29.783 1 53.76 ? H11 DMS 505 A 1 HETATM 6 H H12 DMS . . . F 5 -4.704 -8.486 -28.946 1 53.76 ? H12 DMS 505 A 1 HETATM 7 H H13 DMS . . . F 5 -4.528 -10.156 -29.359 1 53.76 ? H13 DMS 505 A 1 HETATM 8 H H21 DMS . . . F 5 -3.523 -10.187 -33.032 1 50.36 ? H21 DMS 505 A 1 HETATM 9 H H22 DMS . . . F 5 -5.16 -10.48 -32.561 1 50.36 ? H22 DMS 505 A 1 HETATM 10 H H23 DMS . . . F 5 -3.861 -11.081 -31.591 1 50.36 ? H23 DMS 505 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #