data_7QUI # _model_server_result.job_id gcuo3whFIwGdxlazSayCig _model_server_result.datetime_utc '2025-08-16 19:15:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qui # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7QUI # _exptl.entry_id 7QUI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 943.9 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{S},4~{S},5~{R},6~{R})-5-acetamido-2-[(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-acetamido-2-(hydroxymethyl)-4,6-bis(oxidanyl)oxan-3-yl]oxy-3,5-bis(oxidanyl)-6-(sulfooxymethyl)oxan-4-yl]oxy-6-[(1~{R},2~{R})-3-(naphthalen-2-ylsulfonylamino)-1,2-bis(oxidanyl)propyl]-4-oxidanyl-oxane-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7QUI _cell.length_a 91.682 _cell.length_b 91.682 _cell.length_c 150.131 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QUI _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 B CYS 47 1_555 A SG CYS 91 B CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 31 A CYS 47 1_555 B SG CYS 91 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C35 H49 N3 O23 S2' _chem_comp.formula_weight 943.9 _chem_comp.id F9I _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{S},4~{S},5~{R},6~{R})-5-acetamido-2-[(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-acetamido-2-(hydroxymethyl)-4,6-bis(oxidanyl)oxan-3-yl]oxy-3,5-bis(oxidanyl)-6-(sulfooxymethyl)oxan-4-yl]oxy-6-[(1~{R},2~{R})-3-(naphthalen-2-ylsulfonylamino)-1,2-bis(oxidanyl)propyl]-4-oxidanyl-oxane-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C6 F9I sing 83 n n O3 C6 F9I doub 84 n n C6 N4 F9I sing 85 n n N4 C4 F9I sing 86 n n C4 C3 F9I sing 87 n n C4 C5 F9I sing 88 n n O1 C3 F9I sing 89 n n O2 C5 F9I sing 90 n n C3 O4 F9I sing 91 n n C5 C10 F9I sing 92 n n O10 S1 F9I doub 93 n n O12 S1 F9I doub 94 n n O4 C8 F9I sing 95 n n S1 O11 F9I sing 96 n n S1 O9 F9I sing 97 n n C10 C8 F9I sing 98 n n C10 O6 F9I sing 99 n n C14 O9 F9I sing 100 n n C14 C13 F9I sing 101 n n C8 C9 F9I sing 102 n n O8 C13 F9I sing 103 n n O8 C11 F9I sing 104 n n O6 C11 F9I sing 105 n n C13 C15 F9I sing 106 n n C11 C12 F9I sing 107 n n O5 C9 F9I sing 108 n n O13 C15 F9I sing 109 n n C15 C16 F9I sing 110 n n C12 C16 F9I sing 111 n n C12 O7 F9I sing 112 n n C16 O14 F9I sing 113 n n O14 C17 F9I sing 114 n n O23 S2 F9I doub 115 n n C34 C35 F9I doub 116 n y C34 C30 F9I sing 117 n y C17 C18 F9I sing 118 n n C17 O17 F9I sing 119 n n C17 C19 F9I sing 120 n n C29 C30 F9I doub 121 n y C29 C28 F9I sing 122 n y S2 N6 F9I sing 123 n n S2 C28 F9I sing 124 n n S2 O22 F9I doub 125 n n C18 O15 F9I doub 126 n n C18 O16 F9I sing 127 n n O17 C24 F9I sing 128 n n C35 C36 F9I sing 129 n y N6 C27 F9I sing 130 n n C30 C31 F9I sing 131 n y C19 C20 F9I sing 132 n n C28 C33 F9I doub 133 n y C36 C37 F9I doub 134 n y C26 C27 F9I sing 135 n n C26 C25 F9I sing 136 n n C26 O21 F9I sing 137 n n C31 C37 F9I sing 138 n y C31 C32 F9I doub 139 n y O20 C25 F9I sing 140 n n C24 C25 F9I sing 141 n n C24 C21 F9I sing 142 n n C33 C32 F9I sing 143 n y C20 C21 F9I sing 144 n n C20 O18 F9I sing 145 n n C21 N5 F9I sing 146 n n N5 C22 F9I sing 147 n n O19 C22 F9I doub 148 n n C22 C23 F9I sing 149 n n O1 H1 F9I sing 150 n n C5 H2 F9I sing 151 n n C7 H3 F9I sing 152 n n C7 H4 F9I sing 153 n n C7 H5 F9I sing 154 n n C8 H6 F9I sing 155 n n C4 H7 F9I sing 156 n n C3 H8 F9I sing 157 n n C10 H9 F9I sing 158 n n C11 H10 F9I sing 159 n n C12 H11 F9I sing 160 n n C13 H12 F9I sing 161 n n C14 H13 F9I sing 162 n n C14 H14 F9I sing 163 n n C15 H15 F9I sing 164 n n C16 H16 F9I sing 165 n n C19 H17 F9I sing 166 n n C19 H18 F9I sing 167 n n C20 H19 F9I sing 168 n n C21 H20 F9I sing 169 n n C23 H21 F9I sing 170 n n C23 H22 F9I sing 171 n n C23 H23 F9I sing 172 n n C24 H24 F9I sing 173 n n C25 H25 F9I sing 174 n n C26 H26 F9I sing 175 n n C27 H27 F9I sing 176 n n C27 H28 F9I sing 177 n n C29 H29 F9I sing 178 n n C32 H30 F9I sing 179 n n C33 H31 F9I sing 180 n n C34 H32 F9I sing 181 n n C35 H33 F9I sing 182 n n C36 H34 F9I sing 183 n n C37 H35 F9I sing 184 n n C9 H36 F9I sing 185 n n C9 H37 F9I sing 186 n n N4 H38 F9I sing 187 n n N5 H39 F9I sing 188 n n N6 H40 F9I sing 189 n n O13 H41 F9I sing 190 n n O16 H42 F9I sing 191 n n O18 H43 F9I sing 192 n n O2 H44 F9I sing 193 n n O20 H45 F9I sing 194 n n O21 H46 F9I sing 195 n n O5 H47 F9I sing 196 n n O7 H48 F9I sing 197 n n O11 H49 F9I sing 198 n n # _atom_sites.entry_id 7QUI _atom_sites.fract_transf_matrix[1][1] 0.010907 _atom_sites.fract_transf_matrix[1][2] 0.006297 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012595 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006661 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 F9I B 1 201 201 F9I NSA . D 2 F9I A 1 201 201 F9I NSA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 F9I . . . C 2 -10.172 47.728 6.486 1 135.23 ? O1 F9I 201 B 1 HETATM 2 C C5 F9I . . . C 2 -10.211 44.671 8.811 1 129.5 ? C5 F9I 201 B 1 HETATM 3 C C6 F9I . . . C 2 -12.766 45.373 6.363 1 139.86 ? C6 F9I 201 B 1 HETATM 4 C C7 F9I . . . C 2 -14.243 45.61 6.46 1 132.78 ? C7 F9I 201 B 1 HETATM 5 C C8 F9I . . . C 2 -8.141 46.063 8.906 1 127.2 ? C8 F9I 201 B 1 HETATM 6 C C4 F9I . . . C 2 -10.62 45.422 7.546 1 135.5 ? C4 F9I 201 B 1 HETATM 7 C C3 F9I . . . C 2 -9.912 46.774 7.473 1 138.63 ? C3 F9I 201 B 1 HETATM 8 C C10 F9I . . . C 2 -8.705 44.654 9.016 1 123.29 ? C10 F9I 201 B 1 HETATM 9 C C11 F9I . . . C 2 -7.803 42.812 10.297 1 100.31 ? C11 F9I 201 B 1 HETATM 10 C C12 F9I . . . C 2 -7.341 42.492 11.713 1 109.43 ? C12 F9I 201 B 1 HETATM 11 C C13 F9I . . . C 2 -8.263 40.523 9.829 1 99 ? C13 F9I 201 B 1 HETATM 12 C C14 F9I . . . C 2 -9.362 39.676 9.24 1 94.53 ? C14 F9I 201 B 1 HETATM 13 C C15 F9I . . . C 2 -7.885 40.086 11.24 1 104.75 ? C15 F9I 201 B 1 HETATM 14 C C16 F9I . . . C 2 -6.854 41.053 11.799 1 105.09 ? C16 F9I 201 B 1 HETATM 15 C C17 F9I . . . C 2 -5.27 40.552 13.605 1 99.35 ? C17 F9I 201 B 1 HETATM 16 C C18 F9I . . . C 2 -4.824 39.102 13.351 1 105.32 ? C18 F9I 201 B 1 HETATM 17 C C19 F9I . . . C 2 -5.231 40.936 15.074 1 96 ? C19 F9I 201 B 1 HETATM 18 C C20 F9I . . . C 2 -3.794 40.964 15.594 1 89.08 ? C20 F9I 201 B 1 HETATM 19 C C21 F9I . . . C 2 -2.94 41.869 14.705 1 111.36 ? C21 F9I 201 B 1 HETATM 20 C C22 F9I . . . C 2 -1.059 42.84 15.944 1 107.48 ? C22 F9I 201 B 1 HETATM 21 C C23 F9I . . . C 2 0.379 42.682 16.339 1 112.54 ? C23 F9I 201 B 1 HETATM 22 C C24 F9I . . . C 2 -3.032 41.412 13.252 1 113.35 ? C24 F9I 201 B 1 HETATM 23 C C25 F9I . . . C 2 -2.183 42.232 12.286 1 105.95 ? C25 F9I 201 B 1 HETATM 24 C C26 F9I . . . C 2 -2.512 41.918 10.823 1 99.44 ? C26 F9I 201 B 1 HETATM 25 C C27 F9I . . . C 2 -1.919 42.973 9.899 1 99.25 ? C27 F9I 201 B 1 HETATM 26 C C28 F9I . . . C 2 -1.757 45.851 8.106 1 108.66 ? C28 F9I 201 B 1 HETATM 27 C C29 F9I . . . C 2 -2.497 46.739 8.834 1 118.47 ? C29 F9I 201 B 1 HETATM 28 C C30 F9I . . . C 2 -1.968 48.011 9.152 1 127.9 ? C30 F9I 201 B 1 HETATM 29 C C31 F9I . . . C 2 -0.666 48.342 8.703 1 129.89 ? C31 F9I 201 B 1 HETATM 30 C C32 F9I . . . C 2 0.063 47.379 7.965 1 126.45 ? C32 F9I 201 B 1 HETATM 31 C C33 F9I . . . C 2 -0.474 46.159 7.677 1 122.34 ? C33 F9I 201 B 1 HETATM 32 C C34 F9I . . . C 2 -2.688 48.965 9.909 1 134.54 ? C34 F9I 201 B 1 HETATM 33 C C35 F9I . . . C 2 -2.143 50.183 10.199 1 139.16 ? C35 F9I 201 B 1 HETATM 34 C C36 F9I . . . C 2 -0.876 50.511 9.752 1 141.5 ? C36 F9I 201 B 1 HETATM 35 C C37 F9I . . . C 2 -0.145 49.62 9.02 1 137.78 ? C37 F9I 201 B 1 HETATM 36 C C9 F9I . . . C 2 -6.634 46.107 8.976 1 107.85 ? C9 F9I 201 B 1 HETATM 37 N N4 F9I . . . C 2 -12.064 45.581 7.482 1 140.25 ? N4 F9I 201 B 1 HETATM 38 N N5 F9I . . . C 2 -1.56 41.882 15.157 1 113.59 ? N5 F9I 201 B 1 HETATM 39 N N6 F9I . . . C 2 -2.935 43.592 9.04 1 103.18 ? N6 F9I 201 B 1 HETATM 40 O O10 F9I . . . C 2 -10.214 38.094 7.143 1 91.62 ? O10 F9I 201 B 1 HETATM 41 O O11 F9I . . . C 2 -9 36.145 8.07 1 89.48 ? O11 F9I 201 B 1 HETATM 42 O O12 F9I . . . C 2 -10.781 37.025 9.331 1 104.75 ? O12 F9I 201 B 1 HETATM 43 O O13 F9I . . . C 2 -9.049 40.08 12.059 1 102.64 ? O13 F9I 201 B 1 HETATM 44 O O14 F9I . . . C 2 -6.585 40.724 13.151 1 105.88 ? O14 F9I 201 B 1 HETATM 45 O O15 F9I . . . C 2 -4.95 38.339 14.405 1 106.73 ? O15 F9I 201 B 1 HETATM 46 O O16 F9I . . . C 2 -4.406 38.705 12.281 1 101.17 ? O16 F9I 201 B 1 HETATM 47 O O17 F9I . . . C 2 -4.402 41.376 12.836 1 96.59 ? O17 F9I 201 B 1 HETATM 48 O O18 F9I . . . C 2 -3.762 41.459 16.932 1 88.63 ? O18 F9I 201 B 1 HETATM 49 O O19 F9I . . . C 2 -1.738 43.791 16.324 1 95.19 ? O19 F9I 201 B 1 HETATM 50 O O2 F9I . . . C 2 -10.737 43.349 8.772 1 134.76 ? O2 F9I 201 B 1 HETATM 51 O O20 F9I . . . C 2 -2.416 43.617 12.518 1 112.41 ? O20 F9I 201 B 1 HETATM 52 O O21 F9I . . . C 2 -2.001 40.629 10.483 1 101.87 ? O21 F9I 201 B 1 HETATM 53 O O22 F9I . . . C 2 -1.439 43.483 7.114 1 101.26 ? O22 F9I 201 B 1 HETATM 54 O O23 F9I . . . C 2 -3.656 44.558 6.911 1 105.36 ? O23 F9I 201 B 1 HETATM 55 O O3 F9I . . . C 2 -12.232 45.012 5.318 1 143.62 ? O3 F9I 201 B 1 HETATM 56 O O4 F9I . . . C 2 -8.513 46.624 7.636 1 141.02 ? O4 F9I 201 B 1 HETATM 57 O O5 F9I . . . C 2 -6.055 45.573 7.794 1 105.95 ? O5 F9I 201 B 1 HETATM 58 O O6 F9I . . . C 2 -8.388 44.091 10.297 1 107.75 ? O6 F9I 201 B 1 HETATM 59 O O7 F9I . . . C 2 -6.295 43.381 12.087 1 106.1 ? O7 F9I 201 B 1 HETATM 60 O O8 F9I . . . C 2 -8.763 41.868 9.864 1 96.97 ? O8 F9I 201 B 1 HETATM 61 O O9 F9I . . . C 2 -8.811 38.35 8.997 1 90.66 ? O9 F9I 201 B 1 HETATM 62 S S1 F9I . . . C 2 -9.773 37.287 8.374 1 90.23 ? S1 F9I 201 B 1 HETATM 63 S S2 F9I . . . C 2 -2.471 44.303 7.673 1 102.05 ? S2 F9I 201 B 1 # _model_server_stats.io_time_ms 82 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 63 #