data_7QUN # _model_server_result.job_id nTLqnfHe5lGxzRzHndCEgQ _model_server_result.datetime_utc '2024-12-27 03:35:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qun # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":801}' # _entry.id 7QUN # _exptl.entry_id 7QUN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 385.478 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S,3R,4S)-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7QUN _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QUN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 587 A SER 587 1_555 E CAA DWZ . A DWZ 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.364 ? covale ? covale2 B OG SER 587 B SER 587 1_555 F CAA DWZ . B DWZ 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? covale ? covale3 C OG SER 587 C SER 587 1_555 G CAA DWZ . C DWZ 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? covale ? covale4 D OG SER 587 D SER 587 1_555 H CAA DWZ . D DWZ 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 ? # _chem_comp.formula 'C17 H27 N3 O5 S' _chem_comp.formula_weight 385.478 _chem_comp.id DWZ _chem_comp.mon_nstd_flag . _chem_comp.name '(2S,3R,4S)-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Meropenem, bound form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBE HBE DWZ sing 83 n n CBE HBEA DWZ sing 84 n n CBE HBEB DWZ sing 85 n n NBC CBE DWZ sing 86 n n CBD NBC DWZ sing 87 n n CBD HBD DWZ sing 88 n n CBD HBDA DWZ sing 89 n n CBD HBDB DWZ sing 90 n n C NBC DWZ sing 91 n n C CA DWZ sing 92 n n O C DWZ doub 93 n n CA N DWZ sing 94 n n CA HA DWZ sing 95 n n CB CA DWZ sing 96 n n CB CG DWZ sing 97 n n CB HB DWZ sing 98 n n CB HBA DWZ sing 99 n n N HN DWZ sing 100 n n CD N DWZ sing 101 n n CD HD DWZ sing 102 n n CD HDA DWZ sing 103 n n CG CD DWZ sing 104 n n CG HG DWZ sing 105 n n SAK CG DWZ sing 106 n n SAK CAI DWZ sing 107 n n CAI HAI DWZ sing 108 n n CAH CAI DWZ sing 109 n n CAH CAS DWZ sing 110 n n CAH HAH DWZ sing 111 n n CAS HAS DWZ sing 112 n n CAS HASA DWZ sing 113 n n CAS HASB DWZ sing 114 n n CAL CAI DWZ sing 115 n n CAL CAM DWZ sing 116 n n CAM OAU DWZ sing 117 n n OAT CAM DWZ doub 118 n n OAU HOAU DWZ sing 119 n n NAJ CAL DWZ doub 120 n n NAJ CAD DWZ sing 121 n n CAD CAH DWZ sing 122 n n CAD CAB DWZ sing 123 n n CAD HAD DWZ sing 124 n n CAB HAB DWZ sing 125 n n CAE CAB DWZ sing 126 n n CAE CAF DWZ sing 127 n n CAE HAE DWZ sing 128 n n CAF HAF DWZ sing 129 n n CAF HAFA DWZ sing 130 n n CAF HAFB DWZ sing 131 n n OAG CAE DWZ sing 132 n n OAG HOAG DWZ sing 133 n n CAA CAB DWZ sing 134 n n CAA OAC DWZ doub 135 n n CAA HAA DWZ sing 136 n n # _atom_sites.entry_id 7QUN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 DWZ A 1 801 801 DWZ MER . F 2 DWZ B 1 801 801 DWZ MER . G 2 DWZ C 1 801 801 DWZ MER . H 2 DWZ D 1 801 801 DWZ MER . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CBE DWZ . . . E 2 149.555 164.326 191.71 1 54.51 ? CBE DWZ 801 A 1 HETATM 2 N NBC DWZ . . . E 2 148.848 163.883 192.919 1 54.51 ? NBC DWZ 801 A 1 HETATM 3 C CBD DWZ . . . E 2 149.612 163.504 194.035 1 54.51 ? CBD DWZ 801 A 1 HETATM 4 C C DWZ . . . E 2 147.507 163.836 192.92 1 54.51 ? C DWZ 801 A 1 HETATM 5 O O DWZ . . . E 2 146.846 164.142 191.951 1 54.51 ? O DWZ 801 A 1 HETATM 6 C CA DWZ . . . E 2 146.764 163.367 194.151 1 54.51 ? CA DWZ 801 A 1 HETATM 7 C CB DWZ . . . E 2 146.587 161.838 194.067 1 54.51 ? CB DWZ 801 A 1 HETATM 8 N N DWZ . . . E 2 145.38 164.001 194.147 1 54.51 ? N DWZ 801 A 1 HETATM 9 C CD DWZ . . . E 2 144.421 162.966 193.788 1 54.51 ? CD DWZ 801 A 1 HETATM 10 C CG DWZ . . . E 2 145.126 161.672 193.633 1 54.51 ? CG DWZ 801 A 1 HETATM 11 S SAK DWZ . . . E 2 145.083 161.144 191.897 1 54.51 ? SAK DWZ 801 A 1 HETATM 12 C CAI DWZ . . . E 2 143.431 161.32 190.95 1 54.51 ? CAI DWZ 801 A 1 HETATM 13 C CAH DWZ . . . E 2 143.456 160.509 189.71 1 54.51 ? CAH DWZ 801 A 1 HETATM 14 C CAS DWZ . . . E 2 143.819 161.353 188.462 1 54.51 ? CAS DWZ 801 A 1 HETATM 15 C CAL DWZ . . . E 2 142.244 160.784 191.765 1 54.51 ? CAL DWZ 801 A 1 HETATM 16 C CAM DWZ . . . E 2 141.987 161.061 193.218 1 54.51 ? CAM DWZ 801 A 1 HETATM 17 O OAT DWZ . . . E 2 141.619 162.082 193.559 1 54.51 ? OAT DWZ 801 A 1 HETATM 18 O OAU DWZ . . . E 2 142.179 160.178 194.041 1 54.51 ? OAU DWZ 801 A 1 HETATM 19 N NAJ DWZ . . . E 2 141.598 159.883 191.028 1 54.51 ? NAJ DWZ 801 A 1 HETATM 20 C CAD DWZ . . . E 2 142.057 159.788 189.684 1 54.51 ? CAD DWZ 801 A 1 HETATM 21 C CAB DWZ . . . E 2 141.091 160.347 188.674 1 54.51 ? CAB DWZ 801 A 1 HETATM 22 C CAE DWZ . . . E 2 139.94 159.351 188.678 1 54.51 ? CAE DWZ 801 A 1 HETATM 23 C CAF DWZ . . . E 2 138.844 159.719 187.656 1 54.51 ? CAF DWZ 801 A 1 HETATM 24 O OAG DWZ . . . E 2 140.402 158.065 188.286 1 54.51 ? OAG DWZ 801 A 1 HETATM 25 C CAA DWZ . . . E 2 140.343 161.61 188.968 1 54.51 ? CAA DWZ 801 A 1 HETATM 26 O OAC DWZ . . . E 2 139.818 161.749 190.014 1 54.51 ? OAC DWZ 801 A 1 HETATM 27 H HBE DWZ . . . E 2 149.626 163.584 191.091 1 54.51 ? HBE DWZ 801 A 1 HETATM 28 H HBEA DWZ . . . E 2 150.442 164.636 191.947 1 54.51 ? HBEA DWZ 801 A 1 HETATM 29 H HBEB DWZ . . . E 2 149.061 165.05 191.296 1 54.51 ? HBEB DWZ 801 A 1 HETATM 30 H HBD DWZ . . . E 2 149.445 164.118 194.766 1 54.51 ? HBD DWZ 801 A 1 HETATM 31 H HBDA DWZ . . . E 2 150.552 163.521 193.799 1 54.51 ? HBDA DWZ 801 A 1 HETATM 32 H HBDB DWZ . . . E 2 149.363 162.605 194.301 1 54.51 ? HBDB DWZ 801 A 1 HETATM 33 H HA DWZ . . . E 2 147.231 163.607 194.964 1 54.51 ? HA DWZ 801 A 1 HETATM 34 H HB DWZ . . . E 2 147.184 161.473 193.395 1 54.51 ? HB DWZ 801 A 1 HETATM 35 H HBA DWZ . . . E 2 146.747 161.428 194.93 1 54.51 ? HBA DWZ 801 A 1 HETATM 36 H HN DWZ . . . E 2 145.358 164.654 193.543 1 54.51 ? HN DWZ 801 A 1 HETATM 37 H HD DWZ . . . E 2 143.765 162.899 194.498 1 54.51 ? HD DWZ 801 A 1 HETATM 38 H HDA DWZ . . . E 2 143.983 163.192 192.952 1 54.51 ? HDA DWZ 801 A 1 HETATM 39 H HG DWZ . . . E 2 144.699 161.001 194.187 1 54.51 ? HG DWZ 801 A 1 HETATM 40 H HAI DWZ . . . E 2 143.28 162.252 190.729 1 54.51 ? HAI DWZ 801 A 1 HETATM 41 H HAH DWZ . . . E 2 144.139 159.83 189.815 1 54.51 ? HAH DWZ 801 A 1 HETATM 42 H HAS DWZ . . . E 2 144.756 161.597 188.502 1 54.51 ? HAS DWZ 801 A 1 HETATM 43 H HASA DWZ . . . E 2 143.275 162.155 188.451 1 54.51 ? HASA DWZ 801 A 1 HETATM 44 H HASB DWZ . . . E 2 143.651 160.83 187.662 1 54.51 ? HASB DWZ 801 A 1 HETATM 45 H HAD DWZ . . . E 2 142.225 158.855 189.493 1 54.51 ? HAD DWZ 801 A 1 HETATM 46 H HAB DWZ . . . E 2 141.294 160.235 187.734 1 54.51 ? HAB DWZ 801 A 1 HETATM 47 H HAE DWZ . . . E 2 139.547 159.298 189.562 1 54.51 ? HAE DWZ 801 A 1 HETATM 48 H HAF DWZ . . . E 2 138.191 160.309 188.066 1 54.51 ? HAF DWZ 801 A 1 HETATM 49 H HAFA DWZ . . . E 2 138.4 158.908 187.362 1 54.51 ? HAFA DWZ 801 A 1 HETATM 50 H HAFB DWZ . . . E 2 139.252 160.161 186.895 1 54.51 ? HAFB DWZ 801 A 1 HETATM 51 H HOAG DWZ . . . E 2 139.783 157.494 188.407 1 54.51 ? HOAG DWZ 801 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 51 #