data_7QXT
#
_model_server_result.job_id            LnME83nucWN4hWxANJO7oQ 
_model_server_result.datetime_utc      '2024-11-22 05:11:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7qxt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1205}' 
#
_entry.id    7QXT 
#
_exptl.entry_id    7QXT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7QXT 
_cell.length_a            81.191 
_cell.length_b            81.191 
_cell.length_c            134.966 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7QXT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 E N N 
? 5 F N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 101 n n 
C1 C2 EDO sing 102 n n 
C1 H11 EDO sing 103 n n 
C1 H12 EDO sing 104 n n 
O1 HO1 EDO sing 105 n n 
C2 O2 EDO sing 106 n n 
C2 H21 EDO sing 107 n n 
C2 H22 EDO sing 108 n n 
O2 HO2 EDO sing 109 n n 
#
_atom_sites.entry_id                     7QXT 
_atom_sites.fract_transf_matrix[1][1]    0.012317 
_atom_sites.fract_transf_matrix[1][2]    0.007111 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014222 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007409 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 AAA 1 1201 1 SO4 SO4 . 
C 3 CL AAA 1 1202 1109 CL CL . 
D 4 1P8 AAA 1 1203 1201 1P8 DRG . 
E 5 EDO AAA 1 1204 1 EDO EDO . 
F 5 EDO AAA 1 1205 2 EDO EDO . 
G 2 SO4 AAA 1 1206 1 SO4 SO4 . 
H 6 HOH AAA 1 1301 115 HOH HOH . 
H 6 HOH AAA 2 1302 126 HOH HOH . 
H 6 HOH AAA 3 1303 62 HOH HOH . 
H 6 HOH AAA 4 1304 113 HOH HOH . 
H 6 HOH AAA 5 1305 151 HOH HOH . 
H 6 HOH AAA 6 1306 112 HOH HOH . 
H 6 HOH AAA 7 1307 46 HOH HOH . 
H 6 HOH AAA 8 1308 90 HOH HOH . 
H 6 HOH AAA 9 1309 147 HOH HOH . 
H 6 HOH AAA 10 1310 17 HOH HOH . 
H 6 HOH AAA 11 1311 8 HOH HOH . 
H 6 HOH AAA 12 1312 58 HOH HOH . 
H 6 HOH AAA 13 1313 79 HOH HOH . 
H 6 HOH AAA 14 1314 21 HOH HOH . 
H 6 HOH AAA 15 1315 44 HOH HOH . 
H 6 HOH AAA 16 1316 30 HOH HOH . 
H 6 HOH AAA 17 1317 61 HOH HOH . 
H 6 HOH AAA 18 1318 69 HOH HOH . 
H 6 HOH AAA 19 1319 1 HOH HOH . 
H 6 HOH AAA 20 1320 9 HOH HOH . 
H 6 HOH AAA 21 1321 51 HOH HOH . 
H 6 HOH AAA 22 1322 97 HOH HOH . 
H 6 HOH AAA 23 1323 10 HOH HOH . 
H 6 HOH AAA 24 1324 12 HOH HOH . 
H 6 HOH AAA 25 1325 150 HOH HOH . 
H 6 HOH AAA 26 1326 20 HOH HOH . 
H 6 HOH AAA 27 1327 11 HOH HOH . 
H 6 HOH AAA 28 1328 108 HOH HOH . 
H 6 HOH AAA 29 1329 22 HOH HOH . 
H 6 HOH AAA 30 1330 64 HOH HOH . 
H 6 HOH AAA 31 1331 2 HOH HOH . 
H 6 HOH AAA 32 1332 144 HOH HOH . 
H 6 HOH AAA 33 1333 31 HOH HOH . 
H 6 HOH AAA 34 1334 66 HOH HOH . 
H 6 HOH AAA 35 1335 15 HOH HOH . 
H 6 HOH AAA 36 1336 16 HOH HOH . 
H 6 HOH AAA 37 1337 39 HOH HOH . 
H 6 HOH AAA 38 1338 13 HOH HOH . 
H 6 HOH AAA 39 1339 33 HOH HOH . 
H 6 HOH AAA 40 1340 145 HOH HOH . 
H 6 HOH AAA 41 1341 19 HOH HOH . 
H 6 HOH AAA 42 1342 87 HOH HOH . 
H 6 HOH AAA 43 1343 34 HOH HOH . 
H 6 HOH AAA 44 1344 133 HOH HOH . 
H 6 HOH AAA 45 1345 53 HOH HOH . 
H 6 HOH AAA 46 1346 143 HOH HOH . 
H 6 HOH AAA 47 1347 40 HOH HOH . 
H 6 HOH AAA 48 1348 94 HOH HOH . 
H 6 HOH AAA 49 1349 48 HOH HOH . 
H 6 HOH AAA 50 1350 32 HOH HOH . 
H 6 HOH AAA 51 1351 82 HOH HOH . 
H 6 HOH AAA 52 1352 27 HOH HOH . 
H 6 HOH AAA 53 1353 65 HOH HOH . 
H 6 HOH AAA 54 1354 98 HOH HOH . 
H 6 HOH AAA 55 1355 121 HOH HOH . 
H 6 HOH AAA 56 1356 154 HOH HOH . 
H 6 HOH AAA 57 1357 118 HOH HOH . 
H 6 HOH AAA 58 1358 148 HOH HOH . 
H 6 HOH AAA 59 1359 89 HOH HOH . 
H 6 HOH AAA 60 1360 57 HOH HOH . 
H 6 HOH AAA 61 1361 45 HOH HOH . 
H 6 HOH AAA 62 1362 72 HOH HOH . 
H 6 HOH AAA 63 1363 7 HOH HOH . 
H 6 HOH AAA 64 1364 49 HOH HOH . 
H 6 HOH AAA 65 1365 24 HOH HOH . 
H 6 HOH AAA 66 1366 86 HOH HOH . 
H 6 HOH AAA 67 1367 36 HOH HOH . 
H 6 HOH AAA 68 1368 50 HOH HOH . 
H 6 HOH AAA 69 1369 91 HOH HOH . 
H 6 HOH AAA 70 1370 54 HOH HOH . 
H 6 HOH AAA 71 1371 4 HOH HOH . 
H 6 HOH AAA 72 1372 122 HOH HOH . 
H 6 HOH AAA 73 1373 80 HOH HOH . 
H 6 HOH AAA 74 1374 6 HOH HOH . 
H 6 HOH AAA 75 1375 149 HOH HOH . 
H 6 HOH AAA 76 1376 138 HOH HOH . 
H 6 HOH AAA 77 1377 38 HOH HOH . 
H 6 HOH AAA 78 1378 84 HOH HOH . 
H 6 HOH AAA 79 1379 70 HOH HOH . 
H 6 HOH AAA 80 1380 18 HOH HOH . 
H 6 HOH AAA 81 1381 83 HOH HOH . 
H 6 HOH AAA 82 1382 55 HOH HOH . 
H 6 HOH AAA 83 1383 100 HOH HOH . 
H 6 HOH AAA 84 1384 95 HOH HOH . 
H 6 HOH AAA 85 1385 68 HOH HOH . 
H 6 HOH AAA 86 1386 37 HOH HOH . 
H 6 HOH AAA 87 1387 23 HOH HOH . 
H 6 HOH AAA 88 1388 107 HOH HOH . 
H 6 HOH AAA 89 1389 75 HOH HOH . 
H 6 HOH AAA 90 1390 52 HOH HOH . 
H 6 HOH AAA 91 1391 3 HOH HOH . 
H 6 HOH AAA 92 1392 56 HOH HOH . 
H 6 HOH AAA 93 1393 136 HOH HOH . 
H 6 HOH AAA 94 1394 29 HOH HOH . 
H 6 HOH AAA 95 1395 35 HOH HOH . 
H 6 HOH AAA 96 1396 132 HOH HOH . 
H 6 HOH AAA 97 1397 76 HOH HOH . 
H 6 HOH AAA 98 1398 131 HOH HOH . 
H 6 HOH AAA 99 1399 137 HOH HOH . 
H 6 HOH AAA 100 1400 88 HOH HOH . 
H 6 HOH AAA 101 1401 159 HOH HOH . 
H 6 HOH AAA 102 1402 67 HOH HOH . 
H 6 HOH AAA 103 1403 114 HOH HOH . 
H 6 HOH AAA 104 1404 156 HOH HOH . 
H 6 HOH AAA 105 1405 124 HOH HOH . 
H 6 HOH AAA 106 1406 128 HOH HOH . 
H 6 HOH AAA 107 1407 130 HOH HOH . 
H 6 HOH AAA 108 1408 77 HOH HOH . 
H 6 HOH AAA 109 1409 119 HOH HOH . 
H 6 HOH AAA 110 1410 26 HOH HOH . 
H 6 HOH AAA 111 1411 63 HOH HOH . 
H 6 HOH AAA 112 1412 78 HOH HOH . 
H 6 HOH AAA 113 1413 47 HOH HOH . 
H 6 HOH AAA 114 1414 127 HOH HOH . 
H 6 HOH AAA 115 1415 117 HOH HOH . 
H 6 HOH AAA 116 1416 14 HOH HOH . 
H 6 HOH AAA 117 1417 73 HOH HOH . 
H 6 HOH AAA 118 1418 162 HOH HOH . 
H 6 HOH AAA 119 1419 139 HOH HOH . 
H 6 HOH AAA 120 1420 74 HOH HOH . 
H 6 HOH AAA 121 1421 129 HOH HOH . 
H 6 HOH AAA 122 1422 153 HOH HOH . 
H 6 HOH AAA 123 1423 25 HOH HOH . 
H 6 HOH AAA 124 1424 92 HOH HOH . 
H 6 HOH AAA 125 1425 116 HOH HOH . 
H 6 HOH AAA 126 1426 106 HOH HOH . 
H 6 HOH AAA 127 1427 28 HOH HOH . 
H 6 HOH AAA 128 1428 59 HOH HOH . 
H 6 HOH AAA 129 1429 43 HOH HOH . 
H 6 HOH AAA 130 1430 163 HOH HOH . 
H 6 HOH AAA 131 1431 102 HOH HOH . 
H 6 HOH AAA 132 1432 160 HOH HOH . 
H 6 HOH AAA 133 1433 93 HOH HOH . 
H 6 HOH AAA 134 1434 142 HOH HOH . 
H 6 HOH AAA 135 1435 60 HOH HOH . 
H 6 HOH AAA 136 1436 135 HOH HOH . 
H 6 HOH AAA 137 1437 81 HOH HOH . 
H 6 HOH AAA 138 1438 5 HOH HOH . 
H 6 HOH AAA 139 1439 157 HOH HOH . 
H 6 HOH AAA 140 1440 71 HOH HOH . 
H 6 HOH AAA 141 1441 123 HOH HOH . 
H 6 HOH AAA 142 1442 42 HOH HOH . 
H 6 HOH AAA 143 1443 125 HOH HOH . 
H 6 HOH AAA 144 1444 101 HOH HOH . 
H 6 HOH AAA 145 1445 105 HOH HOH . 
H 6 HOH AAA 146 1446 85 HOH HOH . 
H 6 HOH AAA 147 1447 111 HOH HOH . 
H 6 HOH AAA 148 1448 134 HOH HOH . 
H 6 HOH AAA 149 1449 158 HOH HOH . 
H 6 HOH AAA 150 1450 104 HOH HOH . 
H 6 HOH AAA 151 1451 155 HOH HOH . 
H 6 HOH AAA 152 1452 140 HOH HOH . 
H 6 HOH AAA 153 1453 109 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . F 5 4.939 49.962 1.928 1 88.91 ? C1 EDO 1205 AAA 1 
HETATM 2 O O1 EDO . . . F 5 4.203 48.952 2.58 1 83.33 ? O1 EDO 1205 AAA 1 
HETATM 3 C C2 EDO . . . F 5 4.366 51.306 2.144 1 86.53 ? C2 EDO 1205 AAA 1 
HETATM 4 O O2 EDO . . . F 5 4.312 52.049 0.947 1 92.19 ? O2 EDO 1205 AAA 1 
HETATM 5 H H11 EDO . . . F 5 4.959 49.773 0.967 1 86.97 ? H11 EDO 1205 AAA 1 
HETATM 6 H H12 EDO . . . F 5 5.861 49.952 2.26 1 87 ? H12 EDO 1205 AAA 1 
HETATM 7 H HO1 EDO . . . F 5 4.515 48.228 2.442 0 82.73 ? HO1 EDO 1205 AAA 1 
HETATM 8 H H21 EDO . . . F 5 4.913 51.787 2.798 1 88.4 ? H21 EDO 1205 AAA 1 
HETATM 9 H H22 EDO . . . F 5 3.46 51.215 2.507 1 88.39 ? H22 EDO 1205 AAA 1 
HETATM 10 H HO2 EDO . . . F 5 5.099 52.226 0.691 1 90.41 ? HO2 EDO 1205 AAA 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#