data_7QYV # _model_server_result.job_id ffs28phRu4njYGUXRDBWqQ _model_server_result.datetime_utc '2024-11-02 20:16:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7qyv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1901}' # _entry.id 7QYV # _exptl.entry_id 7QYV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 433.568 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2~{R})-1-[4-(4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrol-2-yl)-1,3-thiazol-2-yl]-~{N}-(4-oxidanylbutyl)piperazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7QYV _cell.length_a 93.902 _cell.length_b 93.902 _cell.length_c 33.232 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7QYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C MG MG . A MG 1902 1_555 D O HOH . A HOH 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc2 C MG MG . A MG 1902 1_555 D O HOH . A HOH 2014 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc3 C MG MG . A MG 1902 1_555 D O HOH . A HOH 2023 6_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc4 C MG MG . A MG 1902 1_555 D O HOH . A HOH 2025 6_557 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc5 C MG MG . A MG 1902 1_555 D O HOH . A HOH 2049 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc6 C MG MG . A MG 1902 1_555 D O HOH . A HOH 2050 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? # _chem_comp.formula 'C21 H31 N5 O3 S' _chem_comp.formula_weight 433.568 _chem_comp.id GJ4 _chem_comp.mon_nstd_flag . _chem_comp.name (2~{R})-1-[4-(4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrol-2-yl)-1,3-thiazol-2-yl]-~{N}-(4-oxidanylbutyl)piperazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 O22 GJ4 sing 83 n n C21 C20 GJ4 sing 84 n n C19 C20 GJ4 sing 85 n n C19 C18 GJ4 sing 86 n n C18 N17 GJ4 sing 87 n n C29 C28 GJ4 sing 88 n n C28 O30 GJ4 doub 89 n n C28 C27 GJ4 sing 90 n n N17 C15 GJ4 sing 91 n n C02 C03 GJ4 sing 92 n n C02 C01 GJ4 sing 93 n n O16 C15 GJ4 doub 94 n n C27 C03 GJ4 sing 95 n y C27 C25 GJ4 doub 96 n y C03 C04 GJ4 doub 97 n y C15 C14 GJ4 sing 98 n n C25 C26 GJ4 sing 99 n n C25 N24 GJ4 sing 100 n y C04 N24 GJ4 sing 101 n y C04 C05 GJ4 sing 102 n n C05 C06 GJ4 doub 103 n y C05 N23 GJ4 sing 104 n y C06 S07 GJ4 sing 105 n y N23 C08 GJ4 doub 106 n y C14 N09 GJ4 sing 107 n n C14 C13 GJ4 sing 108 n n C08 S07 GJ4 sing 109 n y C08 N09 GJ4 sing 110 n n C10 N09 GJ4 sing 111 n n C10 C11 GJ4 sing 112 n n C13 N12 GJ4 sing 113 n n C11 N12 GJ4 sing 114 n n C01 H1 GJ4 sing 115 n n C01 H2 GJ4 sing 116 n n C01 H3 GJ4 sing 117 n n C02 H4 GJ4 sing 118 n n C02 H5 GJ4 sing 119 n n C06 H6 GJ4 sing 120 n n C10 H7 GJ4 sing 121 n n C10 H8 GJ4 sing 122 n n C11 H9 GJ4 sing 123 n n C11 H10 GJ4 sing 124 n n C13 H11 GJ4 sing 125 n n C13 H12 GJ4 sing 126 n n C14 H13 GJ4 sing 127 n n C18 H14 GJ4 sing 128 n n C18 H15 GJ4 sing 129 n n C21 H16 GJ4 sing 130 n n C21 H17 GJ4 sing 131 n n C26 H18 GJ4 sing 132 n n C26 H19 GJ4 sing 133 n n C26 H20 GJ4 sing 134 n n C19 H21 GJ4 sing 135 n n C19 H22 GJ4 sing 136 n n C20 H23 GJ4 sing 137 n n C20 H24 GJ4 sing 138 n n C29 H25 GJ4 sing 139 n n C29 H26 GJ4 sing 140 n n C29 H27 GJ4 sing 141 n n N12 H28 GJ4 sing 142 n n N17 H30 GJ4 sing 143 n n N24 H31 GJ4 sing 144 n n O22 H32 GJ4 sing 145 n n # _atom_sites.entry_id 7QYV _atom_sites.fract_transf_matrix[1][1] 0.010649 _atom_sites.fract_transf_matrix[1][2] 0.006148 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012297 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030091 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GJ4 A 1 1901 1901 GJ4 430 . C 3 MG A 1 1902 1 MG MG . D 4 HOH A 1 2001 3 HOH HOH . D 4 HOH A 2 2002 32 HOH HOH . D 4 HOH A 3 2003 34 HOH HOH . D 4 HOH A 4 2004 41 HOH HOH . D 4 HOH A 5 2005 58 HOH HOH . D 4 HOH A 6 2006 25 HOH HOH . D 4 HOH A 7 2007 31 HOH HOH . D 4 HOH A 8 2008 52 HOH HOH . D 4 HOH A 9 2009 49 HOH HOH . D 4 HOH A 10 2010 36 HOH HOH . D 4 HOH A 11 2011 45 HOH HOH . D 4 HOH A 12 2012 24 HOH HOH . D 4 HOH A 13 2013 9 HOH HOH . D 4 HOH A 14 2014 55 HOH HOH . D 4 HOH A 15 2015 33 HOH HOH . D 4 HOH A 16 2016 37 HOH HOH . D 4 HOH A 17 2017 18 HOH HOH . D 4 HOH A 18 2018 10 HOH HOH . D 4 HOH A 19 2019 2 HOH HOH . D 4 HOH A 20 2020 6 HOH HOH . D 4 HOH A 21 2021 7 HOH HOH . D 4 HOH A 22 2022 28 HOH HOH . D 4 HOH A 23 2023 56 HOH HOH . D 4 HOH A 24 2024 4 HOH HOH . D 4 HOH A 25 2025 53 HOH HOH . D 4 HOH A 26 2026 20 HOH HOH . D 4 HOH A 27 2027 21 HOH HOH . D 4 HOH A 28 2028 26 HOH HOH . D 4 HOH A 29 2029 44 HOH HOH . D 4 HOH A 30 2030 8 HOH HOH . D 4 HOH A 31 2031 43 HOH HOH . D 4 HOH A 32 2032 17 HOH HOH . D 4 HOH A 33 2033 40 HOH HOH . D 4 HOH A 34 2034 19 HOH HOH . D 4 HOH A 35 2035 12 HOH HOH . D 4 HOH A 36 2036 13 HOH HOH . D 4 HOH A 37 2037 5 HOH HOH . D 4 HOH A 38 2038 11 HOH HOH . D 4 HOH A 39 2039 22 HOH HOH . D 4 HOH A 40 2040 27 HOH HOH . D 4 HOH A 41 2041 42 HOH HOH . D 4 HOH A 42 2042 15 HOH HOH . D 4 HOH A 43 2043 38 HOH HOH . D 4 HOH A 44 2044 30 HOH HOH . D 4 HOH A 45 2045 16 HOH HOH . D 4 HOH A 46 2046 51 HOH HOH . D 4 HOH A 47 2047 14 HOH HOH . D 4 HOH A 48 2048 1 HOH HOH . D 4 HOH A 49 2049 54 HOH HOH . D 4 HOH A 50 2050 57 HOH HOH . D 4 HOH A 51 2051 47 HOH HOH . D 4 HOH A 52 2052 29 HOH HOH . D 4 HOH A 53 2053 46 HOH HOH . D 4 HOH A 54 2054 59 HOH HOH . D 4 HOH A 55 2055 35 HOH HOH . D 4 HOH A 56 2056 23 HOH HOH . D 4 HOH A 57 2057 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 GJ4 . . . B 2 35.976 -42.268 28.968 1 38.9 ? C01 GJ4 1901 A 1 HETATM 2 C C02 GJ4 . . . B 2 36.5 -40.998 28.27 1 42.61 ? C02 GJ4 1901 A 1 HETATM 3 C C04 GJ4 . . . B 2 36.675 -38.832 29.731 1 35.8 ? C04 GJ4 1901 A 1 HETATM 4 C C05 GJ4 . . . B 2 38.05 -38.959 30.114 1 44.05 ? C05 GJ4 1901 A 1 HETATM 5 C C06 GJ4 . . . B 2 38.855 -37.873 30.264 1 40.09 ? C06 GJ4 1901 A 1 HETATM 6 C C08 GJ4 . . . B 2 39.913 -40.195 30.702 1 40.33 ? C08 GJ4 1901 A 1 HETATM 7 N N09 GJ4 . . . B 2 40.73 -41.389 31.003 1 47.66 ? N09 GJ4 1901 A 1 HETATM 8 C C10 GJ4 . . . B 2 42.146 -41.356 30.828 1 50.8 ? C10 GJ4 1901 A 1 HETATM 9 C C11 GJ4 . . . B 2 42.886 -42.455 31.698 1 50.89 ? C11 GJ4 1901 A 1 HETATM 10 C C13 GJ4 . . . B 2 41.225 -43.871 31.098 1 57.01 ? C13 GJ4 1901 A 1 HETATM 11 C C14 GJ4 . . . B 2 40.277 -42.718 30.584 1 53.15 ? C14 GJ4 1901 A 1 HETATM 12 C C15 GJ4 . . . B 2 40.224 -42.766 29.053 1 58.2 ? C15 GJ4 1901 A 1 HETATM 13 C C18 GJ4 . . . B 2 40.959 -41.84 26.809 1 56.86 ? C18 GJ4 1901 A 1 HETATM 14 C C21 GJ4 . . . B 2 39.563 -38.571 25.24 1 43.26 ? C21 GJ4 1901 A 1 HETATM 15 C C25 GJ4 . . . B 2 34.634 -38.024 29.567 1 36.15 ? C25 GJ4 1901 A 1 HETATM 16 C C26 GJ4 . . . B 2 33.408 -37.098 29.753 1 32.96 ? C26 GJ4 1901 A 1 HETATM 17 C C27 GJ4 . . . B 2 34.658 -39.193 28.817 1 36.58 ? C27 GJ4 1901 A 1 HETATM 18 C C03 GJ4 . . . B 2 35.969 -39.716 28.921 1 38.83 ? C03 GJ4 1901 A 1 HETATM 19 C C19 GJ4 . . . B 2 39.771 -40.947 26.271 1 49.98 ? C19 GJ4 1901 A 1 HETATM 20 C C20 GJ4 . . . B 2 40.039 -39.437 26.469 1 46.62 ? C20 GJ4 1901 A 1 HETATM 21 C C28 GJ4 . . . B 2 33.47 -39.806 28.02 1 38.35 ? C28 GJ4 1901 A 1 HETATM 22 C C29 GJ4 . . . B 2 33.718 -40.961 27.053 1 39.44 ? C29 GJ4 1901 A 1 HETATM 23 N N12 GJ4 . . . B 2 42.044 -43.466 32.087 1 54.57 ? N12 GJ4 1901 A 1 HETATM 24 N N17 GJ4 . . . B 2 41.01 -41.794 28.259 1 56.67 ? N17 GJ4 1901 A 1 HETATM 25 N N23 GJ4 . . . B 2 38.616 -40.182 30.348 1 43.53 ? N23 GJ4 1901 A 1 HETATM 26 N N24 GJ4 . . . B 2 35.85 -37.837 30.098 1 39.62 ? N24 GJ4 1901 A 1 HETATM 27 O O16 GJ4 . . . B 2 39.525 -43.618 28.48 1 63.06 ? O16 GJ4 1901 A 1 HETATM 28 O O22 GJ4 . . . B 2 39.638 -37.19 25.613 1 52.08 ? O22 GJ4 1901 A 1 HETATM 29 O O30 GJ4 . . . B 2 32.387 -39.382 28.162 1 36.5 ? O30 GJ4 1901 A 1 HETATM 30 S S07 GJ4 . . . B 2 40.445 -38.561 30.742 1 42.3 ? S07 GJ4 1901 A 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 30 #