data_7R01 # _model_server_result.job_id RYKl9aSdeJoY9PW54x4A0g _model_server_result.datetime_utc '2025-01-26 20:15:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r01 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1901}' # _entry.id 7R01 # _exptl.entry_id 7R01 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 261.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[4-(4-ethanoylpiperazin-1-yl)phenyl]guanidine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7R01 _cell.length_a 94.652 _cell.length_b 94.652 _cell.length_c 32.741 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R01 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . A MG 1903 1_555 E O HOH . A HOH 2001 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.996 ? metalc ? metalc2 D MG MG . A MG 1903 1_555 E O HOH . A HOH 2033 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? # _chem_comp.formula 'C13 H19 N5 O' _chem_comp.formula_weight 261.323 _chem_comp.id GI7 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[4-(4-ethanoylpiperazin-1-yl)phenyl]guanidine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C06 C05 GI7 sing 92 n n C06 N07 GI7 sing 93 n n C05 N04 GI7 sing 94 n n N07 C10 GI7 sing 95 n n N07 C08 GI7 sing 96 n n N04 C02 GI7 sing 97 n n N04 C09 GI7 sing 98 n n O03 C02 GI7 doub 99 n n C19 C10 GI7 doub 100 n y C19 C18 GI7 sing 101 n y N16 C15 GI7 doub 102 n n C02 C01 GI7 sing 103 n n C09 C08 GI7 sing 104 n n C10 C11 GI7 sing 105 n y C18 C13 GI7 doub 106 n y C11 C12 GI7 doub 107 n y C15 N17 GI7 sing 108 n n C15 N14 GI7 sing 109 n n C13 C12 GI7 sing 110 n y C13 N14 GI7 sing 111 n n C01 H1 GI7 sing 112 n n C01 H2 GI7 sing 113 n n C01 H3 GI7 sing 114 n n C05 H4 GI7 sing 115 n n C05 H5 GI7 sing 116 n n C06 H6 GI7 sing 117 n n C06 H7 GI7 sing 118 n n C08 H8 GI7 sing 119 n n C08 H9 GI7 sing 120 n n C11 H10 GI7 sing 121 n n N17 H11 GI7 sing 122 n n N17 H12 GI7 sing 123 n n C18 H13 GI7 sing 124 n n C09 H14 GI7 sing 125 n n C09 H15 GI7 sing 126 n n C12 H16 GI7 sing 127 n n C19 H17 GI7 sing 128 n n N14 H18 GI7 sing 129 n n N16 H19 GI7 sing 130 n n # _atom_sites.entry_id 7R01 _atom_sites.fract_transf_matrix[1][1] 0.010565 _atom_sites.fract_transf_matrix[1][2] 0.0061 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012199 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030543 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GI7 A 1 1901 1901 GI7 B18 . C 3 EDO A 1 1902 2001 EDO EDO . D 4 MG A 1 1903 1 MG MG . E 5 HOH A 1 2001 12 HOH HOH . E 5 HOH A 2 2002 32 HOH HOH . E 5 HOH A 3 2003 36 HOH HOH . E 5 HOH A 4 2004 4 HOH HOH . E 5 HOH A 5 2005 3 HOH HOH . E 5 HOH A 6 2006 28 HOH HOH . E 5 HOH A 7 2007 5 HOH HOH . E 5 HOH A 8 2008 6 HOH HOH . E 5 HOH A 9 2009 10 HOH HOH . E 5 HOH A 10 2010 7 HOH HOH . E 5 HOH A 11 2011 9 HOH HOH . E 5 HOH A 12 2012 25 HOH HOH . E 5 HOH A 13 2013 2 HOH HOH . E 5 HOH A 14 2014 1 HOH HOH . E 5 HOH A 15 2015 15 HOH HOH . E 5 HOH A 16 2016 14 HOH HOH . E 5 HOH A 17 2017 22 HOH HOH . E 5 HOH A 18 2018 13 HOH HOH . E 5 HOH A 19 2019 24 HOH HOH . E 5 HOH A 20 2020 18 HOH HOH . E 5 HOH A 21 2021 23 HOH HOH . E 5 HOH A 22 2022 19 HOH HOH . E 5 HOH A 23 2023 11 HOH HOH . E 5 HOH A 24 2024 21 HOH HOH . E 5 HOH A 25 2025 26 HOH HOH . E 5 HOH A 26 2026 31 HOH HOH . E 5 HOH A 27 2027 17 HOH HOH . E 5 HOH A 28 2028 8 HOH HOH . E 5 HOH A 29 2029 34 HOH HOH . E 5 HOH A 30 2030 29 HOH HOH . E 5 HOH A 31 2031 33 HOH HOH . E 5 HOH A 32 2032 20 HOH HOH . E 5 HOH A 33 2033 27 HOH HOH . E 5 HOH A 34 2034 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 GI7 . . . B 2 -33.808 37.625 -20.344 1 48.58 ? C01 GI7 1901 A 1 HETATM 2 C C02 GI7 . . . B 2 -33.608 39.019 -20.944 1 43.37 ? C02 GI7 1901 A 1 HETATM 3 C C05 GI7 . . . B 2 -34.7 41.171 -21.737 1 42.4 ? C05 GI7 1901 A 1 HETATM 4 C C06 GI7 . . . B 2 -36.001 41.711 -22.339 1 61.81 ? C06 GI7 1901 A 1 HETATM 5 C C08 GI7 . . . B 2 -37.249 40.365 -20.626 1 49.2 ? C08 GI7 1901 A 1 HETATM 6 C C10 GI7 . . . B 2 -37.752 42.883 -20.899 1 80.33 ? C10 GI7 1901 A 1 HETATM 7 C C11 GI7 . . . B 2 -38.913 42.871 -20.162 1 82.34 ? C11 GI7 1901 A 1 HETATM 8 C C13 GI7 . . . B 2 -38.749 45.306 -19.923 1 86.67 ? C13 GI7 1901 A 1 HETATM 9 C C15 GI7 . . . B 2 -40.518 47.111 -19.94 1 91.91 ? C15 GI7 1901 A 1 HETATM 10 N N17 GI7 . . . B 2 -40.957 48.233 -19.481 1 99.4 ? N17 GI7 1901 A 1 HETATM 11 C C18 GI7 . . . B 2 -37.574 45.312 -20.67 1 85.57 ? C18 GI7 1901 A 1 HETATM 12 C C09 GI7 . . . B 2 -36.142 39.354 -20.921 1 49.56 ? C09 GI7 1901 A 1 HETATM 13 C C12 GI7 . . . B 2 -39.429 44.096 -19.662 1 84.7 ? C12 GI7 1901 A 1 HETATM 14 C C19 GI7 . . . B 2 -37.059 44.106 -21.169 1 83.97 ? C19 GI7 1901 A 1 HETATM 15 N N04 GI7 . . . B 2 -34.821 39.865 -21.225 1 47.98 ? N04 GI7 1901 A 1 HETATM 16 N N07 GI7 . . . B 2 -37.198 41.651 -21.422 1 63.66 ? N07 GI7 1901 A 1 HETATM 17 N N14 GI7 . . . B 2 -39.273 46.574 -19.418 1 86.91 ? N14 GI7 1901 A 1 HETATM 18 N N16 GI7 . . . B 2 -41.263 46.388 -20.96 1 86.52 ? N16 GI7 1901 A 1 HETATM 19 O O03 GI7 . . . B 2 -32.528 39.447 -21.181 1 51.08 ? O03 GI7 1901 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #