data_7R09 # _model_server_result.job_id lqkJYFPgls9X3vq4YO5gFw _model_server_result.datetime_utc '2024-11-18 10:33:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r09 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 7R09 # _exptl.entry_id 7R09 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 100.182 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CYCLOHEXYLAMMONIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7R09 _cell.length_a 93.508 _cell.length_b 93.508 _cell.length_c 75.786 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R09 _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 75.786 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 N 1' _chem_comp.formula_weight 100.182 _chem_comp.id HAI _chem_comp.mon_nstd_flag . _chem_comp.name 'CYCLOHEXYLAMMONIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 HAI sing 129 n n C1 C6 HAI sing 130 n n C1 N HAI sing 131 n n C1 H1 HAI sing 132 n n C2 C3 HAI sing 133 n n C2 H21 HAI sing 134 n n C2 H22 HAI sing 135 n n C3 C4 HAI sing 136 n n C3 H31 HAI sing 137 n n C3 H32 HAI sing 138 n n C4 C5 HAI sing 139 n n C4 H41 HAI sing 140 n n C4 H42 HAI sing 141 n n C5 C6 HAI sing 142 n n C5 H51 HAI sing 143 n n C5 H52 HAI sing 144 n n C6 H61 HAI sing 145 n n C6 H62 HAI sing 146 n n N HN1 HAI sing 147 n n N HN2 HAI sing 148 n n N HN3 HAI sing 149 n n # _atom_sites.entry_id 7R09 _atom_sites.fract_transf_matrix[1][1] 0.010694 _atom_sites.fract_transf_matrix[1][2] 0.006174 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012349 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013195 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 401 401 NAP NAP . C 3 HAI A 1 402 402 HAI UNL . D 4 HOH A 1 501 63 HOH HOH . D 4 HOH A 2 502 128 HOH HOH . D 4 HOH A 3 503 76 HOH HOH . D 4 HOH A 4 504 6 HOH HOH . D 4 HOH A 5 505 137 HOH HOH . D 4 HOH A 6 506 133 HOH HOH . D 4 HOH A 7 507 138 HOH HOH . D 4 HOH A 8 508 60 HOH HOH . D 4 HOH A 9 509 96 HOH HOH . D 4 HOH A 10 510 73 HOH HOH . D 4 HOH A 11 511 29 HOH HOH . D 4 HOH A 12 512 71 HOH HOH . D 4 HOH A 13 513 32 HOH HOH . D 4 HOH A 14 514 85 HOH HOH . D 4 HOH A 15 515 86 HOH HOH . D 4 HOH A 16 516 42 HOH HOH . D 4 HOH A 17 517 5 HOH HOH . D 4 HOH A 18 518 111 HOH HOH . D 4 HOH A 19 519 125 HOH HOH . D 4 HOH A 20 520 135 HOH HOH . D 4 HOH A 21 521 9 HOH HOH . D 4 HOH A 22 522 58 HOH HOH . D 4 HOH A 23 523 90 HOH HOH . D 4 HOH A 24 524 31 HOH HOH . D 4 HOH A 25 525 23 HOH HOH . D 4 HOH A 26 526 66 HOH HOH . D 4 HOH A 27 527 18 HOH HOH . D 4 HOH A 28 528 78 HOH HOH . D 4 HOH A 29 529 13 HOH HOH . D 4 HOH A 30 530 67 HOH HOH . D 4 HOH A 31 531 3 HOH HOH . D 4 HOH A 32 532 91 HOH HOH . D 4 HOH A 33 533 36 HOH HOH . D 4 HOH A 34 534 30 HOH HOH . D 4 HOH A 35 535 40 HOH HOH . D 4 HOH A 36 536 1 HOH HOH . D 4 HOH A 37 537 65 HOH HOH . D 4 HOH A 38 538 28 HOH HOH . D 4 HOH A 39 539 93 HOH HOH . D 4 HOH A 40 540 124 HOH HOH . D 4 HOH A 41 541 44 HOH HOH . D 4 HOH A 42 542 55 HOH HOH . D 4 HOH A 43 543 126 HOH HOH . D 4 HOH A 44 544 94 HOH HOH . D 4 HOH A 45 545 108 HOH HOH . D 4 HOH A 46 546 11 HOH HOH . D 4 HOH A 47 547 4 HOH HOH . D 4 HOH A 48 548 27 HOH HOH . D 4 HOH A 49 549 121 HOH HOH . D 4 HOH A 50 550 74 HOH HOH . D 4 HOH A 51 551 127 HOH HOH . D 4 HOH A 52 552 92 HOH HOH . D 4 HOH A 53 553 57 HOH HOH . D 4 HOH A 54 554 38 HOH HOH . D 4 HOH A 55 555 2 HOH HOH . D 4 HOH A 56 556 33 HOH HOH . D 4 HOH A 57 557 56 HOH HOH . D 4 HOH A 58 558 26 HOH HOH . D 4 HOH A 59 559 101 HOH HOH . D 4 HOH A 60 560 25 HOH HOH . D 4 HOH A 61 561 46 HOH HOH . D 4 HOH A 62 562 7 HOH HOH . D 4 HOH A 63 563 14 HOH HOH . D 4 HOH A 64 564 21 HOH HOH . D 4 HOH A 65 565 39 HOH HOH . D 4 HOH A 66 566 130 HOH HOH . D 4 HOH A 67 567 82 HOH HOH . D 4 HOH A 68 568 134 HOH HOH . D 4 HOH A 69 569 102 HOH HOH . D 4 HOH A 70 570 24 HOH HOH . D 4 HOH A 71 571 22 HOH HOH . D 4 HOH A 72 572 107 HOH HOH . D 4 HOH A 73 573 97 HOH HOH . D 4 HOH A 74 574 16 HOH HOH . D 4 HOH A 75 575 132 HOH HOH . D 4 HOH A 76 576 17 HOH HOH . D 4 HOH A 77 577 122 HOH HOH . D 4 HOH A 78 579 12 HOH HOH . D 4 HOH A 79 580 136 HOH HOH . D 4 HOH A 80 581 75 HOH HOH . D 4 HOH A 81 583 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HAI . . . C 3 -38.759 -1.257 18.385 1 28.35 ? C1 HAI 402 A 1 HETATM 2 C C2 HAI . . . C 3 -37.633 -1.392 19.349 1 28.89 ? C2 HAI 402 A 1 HETATM 3 C C3 HAI . . . C 3 -38.165 -1.522 20.755 1 29.53 ? C3 HAI 402 A 1 HETATM 4 C C4 HAI . . . C 3 -39.094 -0.388 21.053 1 30.75 ? C4 HAI 402 A 1 HETATM 5 C C5 HAI . . . C 3 -40.153 -0.257 20.018 1 29.09 ? C5 HAI 402 A 1 HETATM 6 C C6 HAI . . . C 3 -39.536 -0.019 18.665 1 29.94 ? C6 HAI 402 A 1 HETATM 7 N N HAI . . . C 3 -38.176 -1.203 17.024 1 29.8 1 N HAI 402 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #