data_7R0N # _model_server_result.job_id el9ugh-UrFNBjBkSMqUXxA _model_server_result.datetime_utc '2024-11-09 23:24:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r0n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 7R0N # _exptl.entry_id 7R0N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 396.302 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[4-[2-bromanyl-6-(2-hydroxyethylamino)pyridin-4-yl]sulfanylphenyl]propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7R0N _cell.length_a 41.351 _cell.length_b 59.228 _cell.length_c 65.207 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R0N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 C C23 H40 . A H40 1002 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.78 ? covale ? covale2 A SG CYS 13 A CYS 12 1_555 C C23 H40 . A H40 1002 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.841 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 B MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc2 B MG MG . A MG 1001 1_555 D O2B GDP . A GDP 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc3 B MG MG . A MG 1001 1_555 E O HOH . A HOH 1116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc4 B MG MG . A MG 1001 1_555 E O HOH . A HOH 1137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc5 B MG MG . A MG 1001 1_555 E O HOH . A HOH 1154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc6 B MG MG . A MG 1001 1_555 E O HOH . A HOH 1183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? # _chem_comp.formula 'C16 H18 Br N3 O2 S' _chem_comp.formula_weight 396.302 _chem_comp.id H40 _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[4-[2-bromanyl-6-(2-hydroxyethylamino)pyridin-4-yl]sulfanylphenyl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O22 C20 H40 doub 174 n n C9 C10 H40 doub 175 n y C9 C8 H40 sing 176 n y C10 C13 H40 sing 177 n y C23 C21 H40 sing 178 n n S7 C8 H40 sing 179 n n S7 C3 H40 sing 180 n n C20 C21 H40 sing 181 n n C20 N19 H40 sing 182 n n C8 C12 H40 doub 183 n y C13 N19 H40 sing 184 n n C13 C11 H40 doub 185 n y C3 C2 H40 doub 186 n y C3 C4 H40 sing 187 n y C2 C1 H40 sing 188 n y C12 C11 H40 sing 189 n y C4 C5 H40 doub 190 n y C1 N14 H40 sing 191 n n C1 N6 H40 doub 192 n y C16 N14 H40 sing 193 n n C16 C17 H40 sing 194 n n C5 N6 H40 sing 195 n y C5 BR1 H40 sing 196 n n C17 O18 H40 sing 197 n n C2 H1 H40 sing 198 n n C11 H2 H40 sing 199 n n C12 H3 H40 sing 200 n n C16 H4 H40 sing 201 n n C16 H5 H40 sing 202 n n C17 H6 H40 sing 203 n n C17 H7 H40 sing 204 n n C21 H8 H40 sing 205 n n C21 H9 H40 sing 206 n n C23 H10 H40 sing 207 n n C23 H11 H40 sing 208 n n C23 H12 H40 sing 209 n n C4 H13 H40 sing 210 n n C9 H14 H40 sing 211 n n C10 H15 H40 sing 212 n n N14 H16 H40 sing 213 n n O18 H17 H40 sing 214 n n N19 H18 H40 sing 215 n n # _atom_sites.entry_id 7R0N _atom_sites.fract_transf_matrix[1][1] 0.024183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016884 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015336 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1001 1001 MG MG . C 3 H40 A 1 1002 1 H40 LI1 . D 4 GDP A 1 1003 2 GDP GDP . E 5 HOH A 1 1101 161 HOH HOH . E 5 HOH A 2 1102 62 HOH HOH . E 5 HOH A 3 1103 173 HOH HOH . E 5 HOH A 4 1104 78 HOH HOH . E 5 HOH A 5 1105 10 HOH HOH . E 5 HOH A 6 1106 28 HOH HOH . E 5 HOH A 7 1107 163 HOH HOH . E 5 HOH A 8 1108 101 HOH HOH . E 5 HOH A 9 1109 107 HOH HOH . E 5 HOH A 10 1110 85 HOH HOH . E 5 HOH A 11 1111 70 HOH HOH . E 5 HOH A 12 1112 172 HOH HOH . E 5 HOH A 13 1113 31 HOH HOH . E 5 HOH A 14 1114 15 HOH HOH . E 5 HOH A 15 1115 117 HOH HOH . E 5 HOH A 16 1116 3 HOH HOH . E 5 HOH A 17 1117 100 HOH HOH . E 5 HOH A 18 1118 175 HOH HOH . E 5 HOH A 19 1119 46 HOH HOH . E 5 HOH A 20 1120 165 HOH HOH . E 5 HOH A 21 1121 89 HOH HOH . E 5 HOH A 22 1122 7 HOH HOH . E 5 HOH A 23 1123 109 HOH HOH . E 5 HOH A 24 1124 73 HOH HOH . E 5 HOH A 25 1125 16 HOH HOH . E 5 HOH A 26 1126 20 HOH HOH . E 5 HOH A 27 1127 47 HOH HOH . E 5 HOH A 28 1128 118 HOH HOH . E 5 HOH A 29 1129 92 HOH HOH . E 5 HOH A 30 1130 106 HOH HOH . E 5 HOH A 31 1131 180 HOH HOH . E 5 HOH A 32 1132 64 HOH HOH . E 5 HOH A 33 1133 103 HOH HOH . E 5 HOH A 34 1134 21 HOH HOH . E 5 HOH A 35 1135 43 HOH HOH . E 5 HOH A 36 1136 77 HOH HOH . E 5 HOH A 37 1137 4 HOH HOH . E 5 HOH A 38 1138 35 HOH HOH . E 5 HOH A 39 1139 22 HOH HOH . E 5 HOH A 40 1140 168 HOH HOH . E 5 HOH A 41 1141 53 HOH HOH . E 5 HOH A 42 1142 52 HOH HOH . E 5 HOH A 43 1143 14 HOH HOH . E 5 HOH A 44 1144 124 HOH HOH . E 5 HOH A 45 1145 38 HOH HOH . E 5 HOH A 46 1146 23 HOH HOH . E 5 HOH A 47 1147 144 HOH HOH . E 5 HOH A 48 1148 112 HOH HOH . E 5 HOH A 49 1149 98 HOH HOH . E 5 HOH A 50 1150 125 HOH HOH . E 5 HOH A 51 1151 86 HOH HOH . E 5 HOH A 52 1152 9 HOH HOH . E 5 HOH A 53 1153 104 HOH HOH . E 5 HOH A 54 1154 2 HOH HOH . E 5 HOH A 55 1155 79 HOH HOH . E 5 HOH A 56 1156 45 HOH HOH . E 5 HOH A 57 1157 54 HOH HOH . E 5 HOH A 58 1158 6 HOH HOH . E 5 HOH A 59 1159 49 HOH HOH . E 5 HOH A 60 1160 90 HOH HOH . E 5 HOH A 61 1161 149 HOH HOH . E 5 HOH A 62 1162 114 HOH HOH . E 5 HOH A 63 1163 143 HOH HOH . E 5 HOH A 64 1164 8 HOH HOH . E 5 HOH A 65 1165 134 HOH HOH . E 5 HOH A 66 1166 50 HOH HOH . E 5 HOH A 67 1167 152 HOH HOH . E 5 HOH A 68 1168 55 HOH HOH . E 5 HOH A 69 1169 41 HOH HOH . E 5 HOH A 70 1170 11 HOH HOH . E 5 HOH A 71 1171 66 HOH HOH . E 5 HOH A 72 1172 57 HOH HOH . E 5 HOH A 73 1173 170 HOH HOH . E 5 HOH A 74 1174 156 HOH HOH . E 5 HOH A 75 1175 119 HOH HOH . E 5 HOH A 76 1176 76 HOH HOH . E 5 HOH A 77 1177 61 HOH HOH . E 5 HOH A 78 1178 84 HOH HOH . E 5 HOH A 79 1179 97 HOH HOH . E 5 HOH A 80 1180 5 HOH HOH . E 5 HOH A 81 1181 128 HOH HOH . E 5 HOH A 82 1182 88 HOH HOH . E 5 HOH A 83 1183 1 HOH HOH . E 5 HOH A 84 1184 140 HOH HOH . E 5 HOH A 85 1185 99 HOH HOH . E 5 HOH A 86 1186 120 HOH HOH . E 5 HOH A 87 1187 37 HOH HOH . E 5 HOH A 88 1188 135 HOH HOH . E 5 HOH A 89 1189 94 HOH HOH . E 5 HOH A 90 1190 13 HOH HOH . E 5 HOH A 91 1191 82 HOH HOH . E 5 HOH A 92 1192 67 HOH HOH . E 5 HOH A 93 1193 139 HOH HOH . E 5 HOH A 94 1194 183 HOH HOH . E 5 HOH A 95 1195 32 HOH HOH . E 5 HOH A 96 1196 136 HOH HOH . E 5 HOH A 97 1197 110 HOH HOH . E 5 HOH A 98 1198 127 HOH HOH . E 5 HOH A 99 1199 137 HOH HOH . E 5 HOH A 100 1200 27 HOH HOH . E 5 HOH A 101 1201 145 HOH HOH . E 5 HOH A 102 1202 68 HOH HOH . E 5 HOH A 103 1203 169 HOH HOH . E 5 HOH A 104 1204 177 HOH HOH . E 5 HOH A 105 1205 30 HOH HOH . E 5 HOH A 106 1206 174 HOH HOH . E 5 HOH A 107 1207 63 HOH HOH . E 5 HOH A 108 1208 33 HOH HOH . E 5 HOH A 109 1209 181 HOH HOH . E 5 HOH A 110 1210 116 HOH HOH . E 5 HOH A 111 1211 39 HOH HOH . E 5 HOH A 112 1212 29 HOH HOH . E 5 HOH A 113 1213 72 HOH HOH . E 5 HOH A 114 1214 12 HOH HOH . E 5 HOH A 115 1215 171 HOH HOH . E 5 HOH A 116 1216 129 HOH HOH . E 5 HOH A 117 1217 138 HOH HOH . E 5 HOH A 118 1218 83 HOH HOH . E 5 HOH A 119 1219 19 HOH HOH . E 5 HOH A 120 1220 151 HOH HOH . E 5 HOH A 121 1221 148 HOH HOH . E 5 HOH A 122 1222 51 HOH HOH . E 5 HOH A 123 1223 60 HOH HOH . E 5 HOH A 124 1224 133 HOH HOH . E 5 HOH A 125 1225 26 HOH HOH . E 5 HOH A 126 1226 25 HOH HOH . E 5 HOH A 127 1227 18 HOH HOH . E 5 HOH A 128 1228 95 HOH HOH . E 5 HOH A 129 1229 111 HOH HOH . E 5 HOH A 130 1230 123 HOH HOH . E 5 HOH A 131 1231 102 HOH HOH . E 5 HOH A 132 1232 17 HOH HOH . E 5 HOH A 133 1233 69 HOH HOH . E 5 HOH A 134 1234 164 HOH HOH . E 5 HOH A 135 1235 75 HOH HOH . E 5 HOH A 136 1236 36 HOH HOH . E 5 HOH A 137 1237 71 HOH HOH . E 5 HOH A 138 1238 59 HOH HOH . E 5 HOH A 139 1239 126 HOH HOH . E 5 HOH A 140 1240 24 HOH HOH . E 5 HOH A 141 1241 132 HOH HOH . E 5 HOH A 142 1242 58 HOH HOH . E 5 HOH A 143 1243 91 HOH HOH . E 5 HOH A 144 1244 167 HOH HOH . E 5 HOH A 145 1245 81 HOH HOH . E 5 HOH A 146 1246 56 HOH HOH . E 5 HOH A 147 1247 179 HOH HOH . E 5 HOH A 148 1248 93 HOH HOH . E 5 HOH A 149 1249 157 HOH HOH . E 5 HOH A 150 1250 42 HOH HOH . E 5 HOH A 151 1251 96 HOH HOH . E 5 HOH A 152 1252 105 HOH HOH . E 5 HOH A 153 1253 187 HOH HOH . E 5 HOH A 154 1254 186 HOH HOH . E 5 HOH A 155 1255 34 HOH HOH . E 5 HOH A 156 1256 48 HOH HOH . E 5 HOH A 157 1257 115 HOH HOH . E 5 HOH A 158 1258 184 HOH HOH . E 5 HOH A 159 1259 182 HOH HOH . E 5 HOH A 160 1260 150 HOH HOH . E 5 HOH A 161 1261 147 HOH HOH . E 5 HOH A 162 1262 74 HOH HOH . E 5 HOH A 163 1263 87 HOH HOH . E 5 HOH A 164 1264 130 HOH HOH . E 5 HOH A 165 1265 159 HOH HOH . E 5 HOH A 166 1266 142 HOH HOH . E 5 HOH A 167 1267 153 HOH HOH . E 5 HOH A 168 1268 80 HOH HOH . E 5 HOH A 169 1269 108 HOH HOH . E 5 HOH A 170 1270 44 HOH HOH . E 5 HOH A 171 1271 131 HOH HOH . E 5 HOH A 172 1272 65 HOH HOH . E 5 HOH A 173 1273 121 HOH HOH . E 5 HOH A 174 1274 146 HOH HOH . E 5 HOH A 175 1275 141 HOH HOH . E 5 HOH A 176 1276 158 HOH HOH . E 5 HOH A 177 1277 160 HOH HOH . E 5 HOH A 178 1278 162 HOH HOH . E 5 HOH A 179 1279 166 HOH HOH . E 5 HOH A 180 1280 176 HOH HOH . E 5 HOH A 181 1281 154 HOH HOH . E 5 HOH A 182 1282 113 HOH HOH . E 5 HOH A 183 1283 40 HOH HOH . E 5 HOH A 184 1284 178 HOH HOH . E 5 HOH A 185 1285 155 HOH HOH . E 5 HOH A 186 1286 185 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 H40 . . . C 3 -5.878 -7.932 3.966 1 24.48 ? C1 H40 1002 A 1 HETATM 2 C C2 H40 . . . C 3 -5.641 -6.858 3.1 1 22.52 ? C2 H40 1002 A 1 HETATM 3 C C3 H40 . . . C 3 -4.315 -6.483 2.81 1 21.58 ? C3 H40 1002 A 1 HETATM 4 C C11 H40 . . . C 3 -0.62 -3.963 3.429 1 14.61 ? C11 H40 1002 A 1 HETATM 5 C C12 H40 . . . C 3 -1.945 -4.314 3.214 1 14.97 ? C12 H40 1002 A 1 HETATM 6 C C13 H40 . . . C 3 0.28 -3.877 2.363 1 14.52 ? C13 H40 1002 A 1 HETATM 7 C C16 H40 . . . C 3 -8.35 -7.748 4.087 1 23.19 ? C16 H40 1002 A 1 HETATM 8 C C17 H40 . . . C 3 -8.611 -6.717 5.211 1 22.71 ? C17 H40 1002 A 1 HETATM 9 C C20 H40 . . . C 3 2.453 -2.762 1.869 1 15.19 ? C20 H40 1002 A 1 HETATM 10 C C21 H40 . . . C 3 3.794 -2.443 2.444 1 16.02 ? C21 H40 1002 A 1 HETATM 11 C C23 H40 . A . C 3 4.963 -2.911 1.578 0.5 18.19 ? C23 H40 1002 A 1 HETATM 12 C C23 H40 . B . C 3 4.734 -1.783 1.407 0.5 14.94 ? C23 H40 1002 A 1 HETATM 13 C C4 H40 . . . C 3 -3.256 -7.208 3.386 1 25.92 ? C4 H40 1002 A 1 HETATM 14 C C5 H40 . . . C 3 -3.579 -8.237 4.285 1 30.76 ? C5 H40 1002 A 1 HETATM 15 N N6 H40 . . . C 3 -4.845 -8.571 4.507 1 27.64 ? N6 H40 1002 A 1 HETATM 16 S S7 H40 . . . C 3 -4.062 -5.135 1.664 1 16.99 ? S7 H40 1002 A 1 HETATM 17 C C8 H40 . . . C 3 -2.372 -4.68 1.943 1 15.27 ? C8 H40 1002 A 1 HETATM 18 C C9 H40 . . . C 3 -1.466 -4.624 0.875 1 14.4 ? C9 H40 1002 A 1 HETATM 19 C C10 H40 . . . C 3 -0.131 -4.251 1.079 1 14.25 ? C10 H40 1002 A 1 HETATM 20 N N14 H40 . . . C 3 -7.087 -8.434 4.306 1 23.5 ? N14 H40 1002 A 1 HETATM 21 BR BR1 H40 . . . C 3 -2.374 -9.296 5.194 1 39.37 ? BR1 H40 1002 A 1 HETATM 22 O O18 H40 . . . C 3 -8.525 -7.365 6.499 1 22.7 ? O18 H40 1002 A 1 HETATM 23 N N19 H40 . . . C 3 1.608 -3.48 2.652 1 14.3 ? N19 H40 1002 A 1 HETATM 24 O O22 H40 . . . C 3 2.124 -2.349 0.741 1 14.87 ? O22 H40 1002 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 158 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 393 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 24 #