data_7R0W # _model_server_result.job_id OIjelqE-xx9XOryFqe0-9w _model_server_result.datetime_utc '2025-03-06 09:10:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r0w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":301}' # _entry.id 7R0W # _exptl.entry_id 7R0W _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 618.503 _entity.id 15 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7R0W _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R0W _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octadecameric _pdbx_struct_assembly.oligomeric_count 18 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 15 AA N N ? 15 MA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 L SG CYS 125 D CYS 125 1_555 L SG CYS 140 D CYS 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 Q SG CYS 125 L CYS 125 1_555 Q SG CYS 140 L CYS 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 D SG CYS 66 K CYS 22 1_555 AA CAB HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.822 ? covale ? covale2 D SG CYS 69 K CYS 25 1_555 AA CAC HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? covale ? covale3 K SG CYS 66 C CYS 22 1_555 MA CAB HEC . C HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? covale ? covale4 K SG CYS 69 C CYS 25 1_555 MA C3C HEC . C HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? covale ? covale5 K SG CYS 69 C CYS 25 1_555 MA CAC HEC . C HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? metalc ? metalc1 B NE2 HIS 93 I HIS 93 1_555 S FE HEM . I HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc2 B NE2 HIS 107 I HIS 107 1_555 U FE HEM . I HEM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc3 B NE2 HIS 194 I HIS 194 1_555 S FE HEM . I HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc4 B NE2 HIS 209 I HIS 209 1_555 U FE HEM . I HEM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc5 T FE HEM . I HEM 302 1_555 TA O HOH . I HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc6 D NE2 HIS 70 K HIS 26 1_555 AA FE HEC . K HEC 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc7 I NE2 HIS 93 A HIS 93 1_555 EA FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc8 I NE2 HIS 107 A HIS 107 1_555 DA FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc9 I NE2 HIS 194 A HIS 194 1_555 EA FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc10 I NE2 HIS 209 A HIS 209 1_555 DA FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc11 HA FE HEM . B HEM 301 1_555 UA O HOH . B HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? metalc ? metalc12 K N TYR 45 C TYR 1 1_555 MA FE HEC . C HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc13 K NE2 HIS 70 C HIS 26 1_555 MA FE HEC . C HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc14 L SG CYS 138 D CYS 138 1_555 NA FE1 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc15 L ND1 HIS 141 D HIS 141 1_555 NA FE2 FES . D FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc16 Q SG CYS 120 L CYS 120 1_555 SA FE1 FES . L FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc17 Q NE2 HIS 122 L HIS 122 1_555 SA FE2 FES . L FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? metalc ? metalc18 Q ND1 HIS 141 L HIS 141 1_555 SA FE2 FES . L FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 619 n n FE NB HEC sing 620 n n FE NC HEC sing 621 n n FE ND HEC sing 622 n n CHA C1A HEC doub 623 n n CHA C4D HEC sing 624 n n CHA HHA HEC sing 625 n n CHB C4A HEC doub 626 n n CHB C1B HEC sing 627 n n CHB HHB HEC sing 628 n n CHC C4B HEC doub 629 n n CHC C1C HEC sing 630 n n CHC HHC HEC sing 631 n n CHD C4C HEC doub 632 n n CHD C1D HEC sing 633 n n CHD HHD HEC sing 634 n n NA C1A HEC sing 635 n y NA C4A HEC sing 636 n y C1A C2A HEC sing 637 n y C2A C3A HEC doub 638 n y C2A CAA HEC sing 639 n n C3A C4A HEC sing 640 n y C3A CMA HEC sing 641 n n CMA HMA1 HEC sing 642 n n CMA HMA2 HEC sing 643 n n CMA HMA3 HEC sing 644 n n CAA CBA HEC sing 645 n n CAA HAA1 HEC sing 646 n n CAA HAA2 HEC sing 647 n n CBA CGA HEC sing 648 n n CBA HBA1 HEC sing 649 n n CBA HBA2 HEC sing 650 n n CGA O1A HEC doub 651 n n CGA O2A HEC sing 652 n n O2A H2A HEC sing 653 n n NB C1B HEC sing 654 n y NB C4B HEC sing 655 n y C1B C2B HEC doub 656 n y C2B C3B HEC sing 657 n y C2B CMB HEC sing 658 n n C3B C4B HEC sing 659 n y C3B CAB HEC doub 660 e n CMB HMB1 HEC sing 661 n n CMB HMB2 HEC sing 662 n n CMB HMB3 HEC sing 663 n n CAB CBB HEC sing 664 n n CAB HAB HEC sing 665 n n CBB HBB1 HEC sing 666 n n CBB HBB2 HEC sing 667 n n CBB HBB3 HEC sing 668 n n NC C1C HEC sing 669 n y NC C4C HEC sing 670 n y C1C C2C HEC doub 671 n y C2C C3C HEC sing 672 n y C2C CMC HEC sing 673 n n C3C C4C HEC sing 674 n y C3C CAC HEC doub 675 e n CMC HMC1 HEC sing 676 n n CMC HMC2 HEC sing 677 n n CMC HMC3 HEC sing 678 n n CAC CBC HEC sing 679 n n CAC HAC HEC sing 680 n n CBC HBC1 HEC sing 681 n n CBC HBC2 HEC sing 682 n n CBC HBC3 HEC sing 683 n n ND C1D HEC sing 684 n y ND C4D HEC sing 685 n y C1D C2D HEC doub 686 n y C2D C3D HEC sing 687 n y C2D CMD HEC sing 688 n n C3D C4D HEC doub 689 n y C3D CAD HEC sing 690 n n CMD HMD1 HEC sing 691 n n CMD HMD2 HEC sing 692 n n CMD HMD3 HEC sing 693 n n CAD CBD HEC sing 694 n n CAD HAD1 HEC sing 695 n n CAD HAD2 HEC sing 696 n n CBD CGD HEC sing 697 n n CBD HBD1 HEC sing 698 n n CBD HBD2 HEC sing 699 n n CGD O1D HEC doub 700 n n CGD O2D HEC sing 701 n n O2D H2D HEC sing 702 n n # _atom_sites.entry_id 7R0W _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code S 10 HEM I 1 301 301 HEM HEM . T 10 HEM I 1 302 302 HEM HEM . U 10 HEM I 1 303 303 HEM HEM . V 11 PGV I 1 304 304 PGV PGV . W 12 ECH I 1 305 305 ECH ECH . X 13 PL9 J 1 201 201 PL9 PL9 . Y 14 CLA J 1 202 202 CLA CLA . Z 11 PGV J 1 203 203 PGV PGV . AA 15 HEC K 1 301 301 HEC HEC . BA 16 LMG N 1 101 101 LMG LMG . CA 17 6PL P 1 101 101 6PL 6PL . DA 10 HEM A 1 301 302 HEM HEM . EA 10 HEM A 1 302 303 HEM HEM . FA 13 PL9 A 1 303 304 PL9 PL9 . GA 12 ECH A 1 304 305 ECH ECH . HA 10 HEM B 1 301 301 HEM HEM . IA 14 CLA B 1 302 201 CLA CLA . JA 18 2WA B 1 303 202 2WA 2WA . KA 11 PGV B 1 304 203 PGV PGV . LA 11 PGV C 1 301 301 PGV PGV . MA 15 HEC C 1 302 302 HEC HEC . NA 19 FES D 1 201 201 FES FES . OA 20 SQD D 1 202 202 SQD SQD . PA 21 LFA E 1 101 101 LFA LFA . QA 17 6PL H 1 101 101 6PL 6PL . RA 20 SQD L 1 201 201 SQD SQD . SA 19 FES L 1 202 202 FES FES . TA 22 HOH I 1 401 401 HOH HOH . UA 22 HOH B 1 401 401 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . AA 15 71.811 74.705 77.385 1 104.31 ? FE HEC 301 K 1 HETATM 2 C CHA HEC . . . AA 15 69.121 72.582 77.376 1 98.31 ? CHA HEC 301 K 1 HETATM 3 C CHB HEC . . . AA 15 72.875 73.274 80.339 1 97.4 ? CHB HEC 301 K 1 HETATM 4 C CHC HEC . . . AA 15 74.489 76.822 77.463 1 101.61 ? CHC HEC 301 K 1 HETATM 5 C CHD HEC . . . AA 15 70.48 76.473 74.737 1 97.93 ? CHD HEC 301 K 1 HETATM 6 N NA HEC . . . AA 15 71.103 73.253 78.653 1 96.84 ? NA HEC 301 K 1 HETATM 7 C C1A HEC . . . AA 15 70.029 72.429 78.391 1 98.34 ? C1A HEC 301 K 1 HETATM 8 C C2A HEC . . . AA 15 69.991 71.384 79.386 1 99.53 ? C2A HEC 301 K 1 HETATM 9 C C3A HEC . . . AA 15 71.03 71.564 80.207 1 98.55 ? C3A HEC 301 K 1 HETATM 10 C C4A HEC . . . AA 15 71.746 72.744 79.762 1 97.57 ? C4A HEC 301 K 1 HETATM 11 C CMA HEC . . . AA 15 71.423 70.692 81.417 1 97.4 ? CMA HEC 301 K 1 HETATM 12 C CAA HEC . . . AA 15 68.926 70.265 79.412 1 97.31 ? CAA HEC 301 K 1 HETATM 13 C CBA HEC . . . AA 15 68.155 70.296 80.724 1 99.6 ? CBA HEC 301 K 1 HETATM 14 C CGA HEC . . . AA 15 66.87 69.525 80.574 1 100.71 ? CGA HEC 301 K 1 HETATM 15 O O1A HEC . . . AA 15 66.604 68.998 79.465 1 100.03 ? O1A HEC 301 K 1 HETATM 16 O O2A HEC . . . AA 15 66.111 69.431 81.573 1 101.61 ? O2A HEC 301 K 1 HETATM 17 N NB HEC . . . AA 15 73.391 75.034 78.69 1 99.35 ? NB HEC 301 K 1 HETATM 18 C C1B HEC . . . AA 15 73.669 74.261 79.8 1 97.99 ? C1B HEC 301 K 1 HETATM 19 C C2B HEC . . . AA 15 74.955 74.67 80.306 1 97.9 ? C2B HEC 301 K 1 HETATM 20 C C3B HEC . . . AA 15 75.436 75.655 79.549 1 95.97 ? C3B HEC 301 K 1 HETATM 21 C C4B HEC . . . AA 15 74.45 75.906 78.494 1 98.89 ? C4B HEC 301 K 1 HETATM 22 C CMB HEC . . . AA 15 75.661 74.077 81.543 1 99.93 ? CMB HEC 301 K 1 HETATM 23 C CAB HEC . . . AA 15 76.822 76.274 79.885 1 97.28 ? CAB HEC 301 K 1 HETATM 24 C CBB HEC . . . AA 15 77.357 77.459 79.048 1 101.54 ? CBB HEC 301 K 1 HETATM 25 N NC HEC . . . AA 15 72.344 76.362 76.316 1 100 ? NC HEC 301 K 1 HETATM 26 C C1C HEC . . . AA 15 73.538 77.032 76.486 1 100.6 ? C1C HEC 301 K 1 HETATM 27 C C2C HEC . . . AA 15 73.559 78.132 75.548 1 101.75 ? C2C HEC 301 K 1 HETATM 28 C C3C HEC . . . AA 15 72.573 77.944 74.673 1 99.12 ? C3C HEC 301 K 1 HETATM 29 C C4C HEC . . . AA 15 71.709 76.895 75.207 1 98.53 ? C4C HEC 301 K 1 HETATM 30 C CMC HEC . . . AA 15 74.81 78.985 75.242 1 102.9 ? CMC HEC 301 K 1 HETATM 31 C CAC HEC . . . AA 15 72.381 78.888 73.457 1 96.69 ? CAC HEC 301 K 1 HETATM 32 C CBC HEC . . . AA 15 71.365 78.389 72.413 1 98.34 ? CBC HEC 301 K 1 HETATM 33 N ND HEC . . . AA 15 70.09 74.542 76.231 1 98.01 ? ND HEC 301 K 1 HETATM 34 C C1D HEC . . . AA 15 69.73 75.417 75.21 1 97.59 ? C1D HEC 301 K 1 HETATM 35 C C2D HEC . . . AA 15 68.425 75.033 74.715 1 99.52 ? C2D HEC 301 K 1 HETATM 36 C C3D HEC . . . AA 15 68.007 73.82 75.54 1 98.26 ? C3D HEC 301 K 1 HETATM 37 C C4D HEC . . . AA 15 69.097 73.592 76.452 1 97.82 ? C4D HEC 301 K 1 HETATM 38 C CMD HEC . . . AA 15 67.591 75.676 73.593 1 103.43 ? CMD HEC 301 K 1 HETATM 39 C CAD HEC . . . AA 15 66.696 73.02 75.415 1 100.73 ? CAD HEC 301 K 1 HETATM 40 C CBD HEC . . . AA 15 66.787 72.12 74.186 1 99.28 ? CBD HEC 301 K 1 HETATM 41 C CGD HEC . . . AA 15 66.008 70.849 74.396 1 99.47 ? CGD HEC 301 K 1 HETATM 42 O O1D HEC . . . AA 15 65.994 70.322 75.537 1 101.52 ? O1D HEC 301 K 1 HETATM 43 O O2D HEC . . . AA 15 65.398 70.357 73.413 1 99.16 ? O2D HEC 301 K 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #