data_7R0Y # _model_server_result.job_id 6w-xgJGquZNjpaJLrQMpyQ _model_server_result.datetime_utc '2024-11-05 00:25:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r0y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1204}' # _entry.id 7R0Y # _exptl.entry_id 7R0Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7R0Y _cell.length_a 79.288 _cell.length_b 79.288 _cell.length_c 138.015 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NE2 GLN 3 AAA GLN 981 1_555 D C4 HNU . AAA HNU 1203 8_665 ? B ? ? ? ? ? ? ? ? ? ? 1.486 ? covale ? covale2 A NE2 GLN 3 AAA GLN 981 1_555 D O1 HNU . AAA HNU 1203 8_665 ? B ? ? ? ? ? ? ? ? ? ? 1.184 ? covale ? covale3 A SG CYS 101 AAA CYS 1079 1_555 D C2 HNU . AAA HNU 1203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.732 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7R0Y _atom_sites.fract_transf_matrix[1][1] 0.012612 _atom_sites.fract_transf_matrix[1][2] 0.007282 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014563 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007246 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 AAA 1 1201 1 SO4 SO4 . C 3 CL AAA 1 1202 1109 CL CL . D 4 HNU AAA 1 1203 1110 HNU DRG . E 5 EDO AAA 1 1204 1 EDO EDO . F 5 EDO AAA 1 1205 2 EDO EDO . G 2 SO4 AAA 1 1206 1 SO4 SO4 . H 6 HOH AAA 1 1301 121 HOH HOH . H 6 HOH AAA 2 1302 175 HOH HOH . H 6 HOH AAA 3 1303 144 HOH HOH . H 6 HOH AAA 4 1304 164 HOH HOH . H 6 HOH AAA 5 1305 213 HOH HOH . H 6 HOH AAA 6 1306 178 HOH HOH . H 6 HOH AAA 7 1307 47 HOH HOH . H 6 HOH AAA 8 1308 67 HOH HOH . H 6 HOH AAA 9 1309 159 HOH HOH . H 6 HOH AAA 10 1310 158 HOH HOH . H 6 HOH AAA 11 1311 111 HOH HOH . H 6 HOH AAA 12 1312 209 HOH HOH . H 6 HOH AAA 13 1313 194 HOH HOH . H 6 HOH AAA 14 1314 149 HOH HOH . H 6 HOH AAA 15 1315 65 HOH HOH . H 6 HOH AAA 16 1316 185 HOH HOH . H 6 HOH AAA 17 1317 166 HOH HOH . H 6 HOH AAA 18 1318 168 HOH HOH . H 6 HOH AAA 19 1319 199 HOH HOH . H 6 HOH AAA 20 1320 207 HOH HOH . H 6 HOH AAA 21 1321 206 HOH HOH . H 6 HOH AAA 22 1322 223 HOH HOH . H 6 HOH AAA 23 1323 49 HOH HOH . H 6 HOH AAA 24 1324 134 HOH HOH . H 6 HOH AAA 25 1325 215 HOH HOH . H 6 HOH AAA 26 1326 150 HOH HOH . H 6 HOH AAA 27 1327 124 HOH HOH . H 6 HOH AAA 28 1328 157 HOH HOH . H 6 HOH AAA 29 1329 54 HOH HOH . H 6 HOH AAA 30 1330 126 HOH HOH . H 6 HOH AAA 31 1331 23 HOH HOH . H 6 HOH AAA 32 1332 104 HOH HOH . H 6 HOH AAA 33 1333 162 HOH HOH . H 6 HOH AAA 34 1334 100 HOH HOH . H 6 HOH AAA 35 1335 59 HOH HOH . H 6 HOH AAA 36 1336 17 HOH HOH . H 6 HOH AAA 37 1337 153 HOH HOH . H 6 HOH AAA 38 1338 55 HOH HOH . H 6 HOH AAA 39 1339 15 HOH HOH . H 6 HOH AAA 40 1340 42 HOH HOH . H 6 HOH AAA 41 1341 197 HOH HOH . H 6 HOH AAA 42 1342 51 HOH HOH . H 6 HOH AAA 43 1343 32 HOH HOH . H 6 HOH AAA 44 1344 118 HOH HOH . H 6 HOH AAA 45 1345 107 HOH HOH . H 6 HOH AAA 46 1346 69 HOH HOH . H 6 HOH AAA 47 1347 18 HOH HOH . H 6 HOH AAA 48 1348 114 HOH HOH . H 6 HOH AAA 49 1349 77 HOH HOH . H 6 HOH AAA 50 1350 37 HOH HOH . H 6 HOH AAA 51 1351 202 HOH HOH . H 6 HOH AAA 52 1352 98 HOH HOH . H 6 HOH AAA 53 1353 87 HOH HOH . H 6 HOH AAA 54 1354 176 HOH HOH . H 6 HOH AAA 55 1355 127 HOH HOH . H 6 HOH AAA 56 1356 14 HOH HOH . H 6 HOH AAA 57 1357 226 HOH HOH . H 6 HOH AAA 58 1358 57 HOH HOH . H 6 HOH AAA 59 1359 73 HOH HOH . H 6 HOH AAA 60 1360 12 HOH HOH . H 6 HOH AAA 61 1361 1 HOH HOH . H 6 HOH AAA 62 1362 95 HOH HOH . H 6 HOH AAA 63 1363 39 HOH HOH . H 6 HOH AAA 64 1364 22 HOH HOH . H 6 HOH AAA 65 1365 151 HOH HOH . H 6 HOH AAA 66 1366 8 HOH HOH . H 6 HOH AAA 67 1367 13 HOH HOH . H 6 HOH AAA 68 1368 234 HOH HOH . H 6 HOH AAA 69 1369 10 HOH HOH . H 6 HOH AAA 70 1370 102 HOH HOH . H 6 HOH AAA 71 1371 61 HOH HOH . H 6 HOH AAA 72 1372 21 HOH HOH . H 6 HOH AAA 73 1373 128 HOH HOH . H 6 HOH AAA 74 1374 222 HOH HOH . H 6 HOH AAA 75 1375 71 HOH HOH . H 6 HOH AAA 76 1376 125 HOH HOH . H 6 HOH AAA 77 1377 113 HOH HOH . H 6 HOH AAA 78 1378 169 HOH HOH . H 6 HOH AAA 79 1379 72 HOH HOH . H 6 HOH AAA 80 1380 33 HOH HOH . H 6 HOH AAA 81 1381 19 HOH HOH . H 6 HOH AAA 82 1382 26 HOH HOH . H 6 HOH AAA 83 1383 173 HOH HOH . H 6 HOH AAA 84 1384 170 HOH HOH . H 6 HOH AAA 85 1385 36 HOH HOH . H 6 HOH AAA 86 1386 58 HOH HOH . H 6 HOH AAA 87 1387 2 HOH HOH . H 6 HOH AAA 88 1388 35 HOH HOH . H 6 HOH AAA 89 1389 94 HOH HOH . H 6 HOH AAA 90 1390 11 HOH HOH . H 6 HOH AAA 91 1391 131 HOH HOH . H 6 HOH AAA 92 1392 83 HOH HOH . H 6 HOH AAA 93 1393 41 HOH HOH . H 6 HOH AAA 94 1394 174 HOH HOH . H 6 HOH AAA 95 1395 109 HOH HOH . H 6 HOH AAA 96 1396 29 HOH HOH . H 6 HOH AAA 97 1397 24 HOH HOH . H 6 HOH AAA 98 1398 123 HOH HOH . H 6 HOH AAA 99 1399 147 HOH HOH . H 6 HOH AAA 100 1400 160 HOH HOH . H 6 HOH AAA 101 1401 40 HOH HOH . H 6 HOH AAA 102 1402 200 HOH HOH . H 6 HOH AAA 103 1403 93 HOH HOH . H 6 HOH AAA 104 1404 129 HOH HOH . H 6 HOH AAA 105 1405 120 HOH HOH . H 6 HOH AAA 106 1406 193 HOH HOH . H 6 HOH AAA 107 1407 4 HOH HOH . H 6 HOH AAA 108 1408 3 HOH HOH . H 6 HOH AAA 109 1409 110 HOH HOH . H 6 HOH AAA 110 1410 182 HOH HOH . H 6 HOH AAA 111 1411 89 HOH HOH . H 6 HOH AAA 112 1412 48 HOH HOH . H 6 HOH AAA 113 1413 91 HOH HOH . H 6 HOH AAA 114 1414 34 HOH HOH . H 6 HOH AAA 115 1415 84 HOH HOH . H 6 HOH AAA 116 1416 161 HOH HOH . H 6 HOH AAA 117 1417 38 HOH HOH . H 6 HOH AAA 118 1418 6 HOH HOH . H 6 HOH AAA 119 1419 20 HOH HOH . H 6 HOH AAA 120 1420 76 HOH HOH . H 6 HOH AAA 121 1421 66 HOH HOH . H 6 HOH AAA 122 1422 97 HOH HOH . H 6 HOH AAA 123 1423 145 HOH HOH . H 6 HOH AAA 124 1424 53 HOH HOH . H 6 HOH AAA 125 1425 117 HOH HOH . H 6 HOH AAA 126 1426 64 HOH HOH . H 6 HOH AAA 127 1427 50 HOH HOH . H 6 HOH AAA 128 1428 85 HOH HOH . H 6 HOH AAA 129 1429 79 HOH HOH . H 6 HOH AAA 130 1430 43 HOH HOH . H 6 HOH AAA 131 1431 211 HOH HOH . H 6 HOH AAA 132 1432 68 HOH HOH . H 6 HOH AAA 133 1433 133 HOH HOH . H 6 HOH AAA 134 1434 25 HOH HOH . H 6 HOH AAA 135 1435 52 HOH HOH . H 6 HOH AAA 136 1436 195 HOH HOH . H 6 HOH AAA 137 1437 108 HOH HOH . H 6 HOH AAA 138 1438 221 HOH HOH . H 6 HOH AAA 139 1439 210 HOH HOH . H 6 HOH AAA 140 1440 188 HOH HOH . H 6 HOH AAA 141 1441 105 HOH HOH . H 6 HOH AAA 142 1442 229 HOH HOH . H 6 HOH AAA 143 1443 9 HOH HOH . H 6 HOH AAA 144 1444 132 HOH HOH . H 6 HOH AAA 145 1445 75 HOH HOH . H 6 HOH AAA 146 1446 228 HOH HOH . H 6 HOH AAA 147 1447 106 HOH HOH . H 6 HOH AAA 148 1448 90 HOH HOH . H 6 HOH AAA 149 1449 86 HOH HOH . H 6 HOH AAA 150 1450 220 HOH HOH . H 6 HOH AAA 151 1451 74 HOH HOH . H 6 HOH AAA 152 1452 225 HOH HOH . H 6 HOH AAA 153 1453 122 HOH HOH . H 6 HOH AAA 154 1454 171 HOH HOH . H 6 HOH AAA 155 1455 96 HOH HOH . H 6 HOH AAA 156 1456 201 HOH HOH . H 6 HOH AAA 157 1457 155 HOH HOH . H 6 HOH AAA 158 1458 92 HOH HOH . H 6 HOH AAA 159 1459 233 HOH HOH . H 6 HOH AAA 160 1460 152 HOH HOH . H 6 HOH AAA 161 1461 190 HOH HOH . H 6 HOH AAA 162 1462 156 HOH HOH . H 6 HOH AAA 163 1463 172 HOH HOH . H 6 HOH AAA 164 1464 88 HOH HOH . H 6 HOH AAA 165 1465 212 HOH HOH . H 6 HOH AAA 166 1466 224 HOH HOH . H 6 HOH AAA 167 1467 112 HOH HOH . H 6 HOH AAA 168 1468 204 HOH HOH . H 6 HOH AAA 169 1469 227 HOH HOH . H 6 HOH AAA 170 1470 16 HOH HOH . H 6 HOH AAA 171 1471 130 HOH HOH . H 6 HOH AAA 172 1472 119 HOH HOH . H 6 HOH AAA 173 1473 28 HOH HOH . H 6 HOH AAA 174 1474 219 HOH HOH . H 6 HOH AAA 175 1475 183 HOH HOH . H 6 HOH AAA 176 1476 81 HOH HOH . H 6 HOH AAA 177 1477 217 HOH HOH . H 6 HOH AAA 178 1478 187 HOH HOH . H 6 HOH AAA 179 1479 82 HOH HOH . H 6 HOH AAA 180 1480 7 HOH HOH . H 6 HOH AAA 181 1481 27 HOH HOH . H 6 HOH AAA 182 1482 198 HOH HOH . H 6 HOH AAA 183 1483 136 HOH HOH . H 6 HOH AAA 184 1484 30 HOH HOH . H 6 HOH AAA 185 1485 218 HOH HOH . H 6 HOH AAA 186 1486 146 HOH HOH . H 6 HOH AAA 187 1487 63 HOH HOH . H 6 HOH AAA 188 1488 78 HOH HOH . H 6 HOH AAA 189 1489 103 HOH HOH . H 6 HOH AAA 190 1490 208 HOH HOH . H 6 HOH AAA 191 1491 230 HOH HOH . H 6 HOH AAA 192 1492 184 HOH HOH . H 6 HOH AAA 193 1493 214 HOH HOH . H 6 HOH AAA 194 1494 189 HOH HOH . H 6 HOH AAA 195 1495 62 HOH HOH . H 6 HOH AAA 196 1496 191 HOH HOH . H 6 HOH AAA 197 1497 115 HOH HOH . H 6 HOH AAA 198 1498 99 HOH HOH . H 6 HOH AAA 199 1499 56 HOH HOH . H 6 HOH AAA 200 1500 5 HOH HOH . H 6 HOH AAA 201 1501 137 HOH HOH . H 6 HOH AAA 202 1502 46 HOH HOH . H 6 HOH AAA 203 1503 141 HOH HOH . H 6 HOH AAA 204 1504 165 HOH HOH . H 6 HOH AAA 205 1505 186 HOH HOH . H 6 HOH AAA 206 1506 180 HOH HOH . H 6 HOH AAA 207 1507 192 HOH HOH . H 6 HOH AAA 208 1508 177 HOH HOH . H 6 HOH AAA 209 1509 167 HOH HOH . H 6 HOH AAA 210 1510 163 HOH HOH . H 6 HOH AAA 211 1511 139 HOH HOH . H 6 HOH AAA 212 1512 80 HOH HOH . H 6 HOH AAA 213 1513 60 HOH HOH . H 6 HOH AAA 214 1514 135 HOH HOH . H 6 HOH AAA 215 1515 140 HOH HOH . H 6 HOH AAA 216 1516 45 HOH HOH . H 6 HOH AAA 217 1517 231 HOH HOH . H 6 HOH AAA 218 1518 205 HOH HOH . H 6 HOH AAA 219 1519 143 HOH HOH . H 6 HOH AAA 220 1520 44 HOH HOH . H 6 HOH AAA 221 1521 148 HOH HOH . H 6 HOH AAA 222 1522 232 HOH HOH . H 6 HOH AAA 223 1523 70 HOH HOH . H 6 HOH AAA 224 1524 138 HOH HOH . H 6 HOH AAA 225 1525 142 HOH HOH . H 6 HOH AAA 226 1526 196 HOH HOH . H 6 HOH AAA 227 1527 154 HOH HOH . H 6 HOH AAA 228 1528 216 HOH HOH . H 6 HOH AAA 229 1529 181 HOH HOH . H 6 HOH AAA 230 1530 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 5 -2.503 37.465 -8.543 1 20.86 ? C1 EDO 1204 AAA 1 HETATM 2 O O1 EDO . . . E 5 -2.74 37.876 -9.868 1 22.62 ? O1 EDO 1204 AAA 1 HETATM 3 C C2 EDO . . . E 5 -3.323 36.258 -8.162 1 28.27 ? C2 EDO 1204 AAA 1 HETATM 4 O O2 EDO . . . E 5 -2.687 35.088 -8.778 1 28.68 ? O2 EDO 1204 AAA 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #