data_7R3J # _model_server_result.job_id RlBmwOqHA7oBeZzi75R5Lg _model_server_result.datetime_utc '2024-10-20 13:08:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7r3j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":700}' # _entry.id 7R3J # _exptl.entry_id 7R3J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 358.251 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(3-bromophenoxy)-N-[(3S)-2-oxothiolan-3-yl]butanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7R3J _cell.length_a 159.256 _cell.length_b 159.256 _cell.length_c 284.1 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7R3J _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall 'I 4 2' _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 86 A HIS 69 1_555 F FE FE . A FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc2 A ND1 HIS 88 A HIS 71 1_555 F FE FE . A FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc3 A OD2 ASP 90 A ASP 73 1_555 E FE FE . A FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc4 A NE2 HIS 91 A HIS 74 1_555 E FE FE . A FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc5 A NE2 HIS 176 A HIS 159 1_555 F FE FE . A FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc6 A OD2 ASP 195 A ASP 178 1_555 E FE FE . A FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc7 A OD2 ASP 195 A ASP 178 1_555 F FE FE . A FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc8 A NE2 HIS 238 A HIS 221 1_555 E FE FE . A FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc9 E FE FE . A FE 601 1_555 K O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc10 F FE FE . A FE 602 1_555 K O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc11 B NE2 HIS 86 B HIS 69 1_555 H FE FE . B FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc12 B ND1 HIS 88 B HIS 71 1_555 H FE FE . B FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc13 B OD2 ASP 90 B ASP 73 1_555 G FE FE . B FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc14 B NE2 HIS 91 B HIS 74 1_555 G FE FE . B FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc15 B NE2 HIS 176 B HIS 159 1_555 H FE FE . B FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc16 B OD2 ASP 195 B ASP 178 1_555 G FE FE . B FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc17 B OD2 ASP 195 B ASP 178 1_555 H FE FE . B FE 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc18 B NE2 HIS 238 B HIS 221 1_555 G FE FE . B FE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc19 G FE FE . B FE 601 1_555 L O HOH . B HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc20 H FE FE . B FE 602 1_555 L O HOH . B HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C14 H16 Br N O3 S' _chem_comp.formula_weight 358.251 _chem_comp.id K5G _chem_comp.mon_nstd_flag . _chem_comp.name 4-(3-bromophenoxy)-N-[(3S)-2-oxothiolan-3-yl]butanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C02 K5G sing 173 n n C02 C03 K5G doub 174 n y C02 C20 K5G sing 175 n y C03 C04 K5G sing 176 n y C20 C19 K5G doub 177 n y O10 C09 K5G doub 178 n n C04 O05 K5G sing 179 n n C04 C18 K5G doub 180 n y O05 C06 K5G sing 181 n n C19 C18 K5G sing 182 n y C07 C06 K5G sing 183 n n C07 C08 K5G sing 184 n n C09 C08 K5G sing 185 n n C09 N11 K5G sing 186 n n C12 N11 K5G sing 187 n n C12 C16 K5G sing 188 n n C12 C13 K5G sing 189 n n O17 C16 K5G doub 190 n n C16 S15 K5G sing 191 n n C13 C14 K5G sing 192 n n S15 C14 K5G sing 193 n n C03 H1 K5G sing 194 n n C18 H2 K5G sing 195 n n C19 H3 K5G sing 196 n n C20 H4 K5G sing 197 n n C06 H5 K5G sing 198 n n C06 H6 K5G sing 199 n n C07 H7 K5G sing 200 n n C08 H8 K5G sing 201 n n N11 H9 K5G sing 202 n n C12 H10 K5G sing 203 n n C13 H11 K5G sing 204 n n C13 H12 K5G sing 205 n n C14 H13 K5G sing 206 n n C14 H14 K5G sing 207 n n C07 H15 K5G sing 208 n n C08 H16 K5G sing 209 n n # _atom_sites.entry_id 7R3J _atom_sites.fract_transf_matrix[1][1] 0.006279 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006279 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00352 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 FE A 1 601 601 FE FE . F 3 FE A 1 602 602 FE FE . G 3 FE B 1 601 601 FE FE . H 3 FE B 1 602 602 FE FE . I 4 K5G C 1 700 700 K5G K5G . J 4 K5G D 1 700 700 K5G K5G . K 5 HOH A 1 701 603 HOH HOH . K 5 HOH A 2 702 9 HOH HOH . K 5 HOH A 3 703 8 HOH HOH . K 5 HOH A 4 704 1 HOH HOH . K 5 HOH A 5 705 11 HOH HOH . K 5 HOH A 6 706 7 HOH HOH . K 5 HOH A 7 707 3 HOH HOH . K 5 HOH A 8 708 2 HOH HOH . K 5 HOH A 9 709 5 HOH HOH . K 5 HOH A 10 710 6 HOH HOH . K 5 HOH A 11 711 4 HOH HOH . K 5 HOH A 12 712 13 HOH HOH . L 5 HOH B 1 701 603 HOH HOH . L 5 HOH B 2 702 10 HOH HOH . L 5 HOH B 3 703 12 HOH HOH . M 5 HOH C 1 801 14 HOH HOH . M 5 HOH C 2 802 15 HOH HOH . M 5 HOH C 3 803 16 HOH HOH . N 5 HOH D 1 801 19 HOH HOH . N 5 HOH D 2 802 18 HOH HOH . N 5 HOH D 3 803 17 HOH HOH . N 5 HOH D 4 804 20 HOH HOH . N 5 HOH D 5 805 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BR BR1 K5G . . . J 4 -57.731 -33.868 -46.126 1 232.99 ? BR1 K5G 700 D 1 HETATM 2 C C02 K5G . . . J 4 -57.045 -32.118 -45.854 1 142.97 ? C02 K5G 700 D 1 HETATM 3 C C03 K5G . . . J 4 -55.977 -31.94 -44.997 1 148.56 ? C03 K5G 700 D 1 HETATM 4 C C04 K5G . . . J 4 -55.526 -30.649 -44.767 1 129.11 ? C04 K5G 700 D 1 HETATM 5 C C18 K5G . . . J 4 -56.149 -29.563 -45.356 1 124.67 ? C18 K5G 700 D 1 HETATM 6 C C19 K5G . . . J 4 -57.207 -29.778 -46.219 1 129.59 ? C19 K5G 700 D 1 HETATM 7 C C20 K5G . . . J 4 -57.657 -31.059 -46.483 1 147.56 ? C20 K5G 700 D 1 HETATM 8 O O05 K5G . . . J 4 -54.395 -30.332 -44.06 1 121.24 ? O05 K5G 700 D 1 HETATM 9 C C06 K5G . . . J 4 -53.238 -29.912 -44.802 1 111 ? C06 K5G 700 D 1 HETATM 10 C C07 K5G . . . J 4 -53.296 -28.423 -45.005 1 109.88 ? C07 K5G 700 D 1 HETATM 11 C C08 K5G . . . J 4 -52.113 -27.705 -44.373 1 102.42 ? C08 K5G 700 D 1 HETATM 12 C C09 K5G . . . J 4 -52.082 -27.847 -42.869 1 99.49 ? C09 K5G 700 D 1 HETATM 13 O O10 K5G . . . J 4 -51.848 -28.927 -42.329 1 98.13 ? O10 K5G 700 D 1 HETATM 14 N N11 K5G . . . J 4 -52.33 -26.735 -42.177 1 98.39 ? N11 K5G 700 D 1 HETATM 15 C C12 K5G . . . J 4 -52.443 -26.721 -40.726 1 97.06 ? C12 K5G 700 D 1 HETATM 16 C C13 K5G . . . J 4 -52.258 -25.321 -40.12 1 95.73 ? C13 K5G 700 D 1 HETATM 17 C C14 K5G . . . J 4 -52.732 -25.436 -38.679 1 94.03 ? C14 K5G 700 D 1 HETATM 18 S S15 K5G . . . J 4 -54.237 -26.435 -38.733 1 99.94 ? S15 K5G 700 D 1 HETATM 19 C C16 K5G . . . J 4 -53.816 -27.168 -40.285 1 102.19 ? C16 K5G 700 D 1 HETATM 20 O O17 K5G . . . J 4 -54.535 -27.934 -40.88 1 108.97 ? O17 K5G 700 D 1 HETATM 21 H H1 K5G . . . J 4 -55.498 -32.788 -44.512 1 179.89 ? H1 K5G 700 D 1 HETATM 22 H H2 K5G . . . J 4 -55.857 -28.529 -45.182 1 151.21 ? H2 K5G 700 D 1 HETATM 23 H H3 K5G . . . J 4 -57.694 -28.929 -46.697 1 157.12 ? H3 K5G 700 D 1 HETATM 24 H H4 K5G . . . J 4 -58.48 -31.225 -47.176 1 178.68 ? H4 K5G 700 D 1 HETATM 25 H H5 K5G . . . J 4 -53.211 -30.418 -45.766 1 134.81 ? H5 K5G 700 D 1 HETATM 26 H H6 K5G . . . J 4 -52.331 -30.179 -44.261 1 134.81 ? H6 K5G 700 D 1 HETATM 27 H H7 K5G . . . J 4 -53.348 -28.191 -46.068 1 133.47 ? H7 K5G 700 D 1 HETATM 28 H H8 K5G . . . J 4 -52.152 -26.655 -44.661 1 124.52 ? H8 K5G 700 D 1 HETATM 29 H H9 K5G . . . J 4 -52.453 -25.839 -42.639 1 119.68 ? H9 K5G 700 D 1 HETATM 30 H H10 K5G . . . J 4 -51.745 -27.418 -40.264 1 118.08 ? H10 K5G 700 D 1 HETATM 31 H H11 K5G . . . J 4 -52.819 -24.568 -40.673 1 116.49 ? H11 K5G 700 D 1 HETATM 32 H H12 K5G . . . J 4 -51.222 -24.992 -40.181 1 116.49 ? H12 K5G 700 D 1 HETATM 33 H H13 K5G . . . J 4 -51.998 -25.915 -38.033 1 114.45 ? H13 K5G 700 D 1 HETATM 34 H H14 K5G . . . J 4 -52.951 -24.468 -38.23 1 114.45 ? H14 K5G 700 D 1 HETATM 35 H H15 K5G . . . J 4 -54.229 -28.027 -44.605 1 133.47 ? H15 K5G 700 D 1 HETATM 36 H H16 K5G . . . J 4 -51.197 -28.091 -44.817 1 124.52 ? H16 K5G 700 D 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 44 _model_server_stats.create_model_time_ms 64 _model_server_stats.query_time_ms 425 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 36 #